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Items: 1 to 50 of 67

1.

High Specificity of BCL11B and GLG1 for EWSR1-FLI1 and EWSR1-ERG Positive Ewing Sarcoma.

Orth MF, Hölting TLB, Dallmayer M, Wehweck FS, Paul T, Musa J, Baldauf MC, Surdez D, Delattre O, Knott MML, Romero-Pérez L, Kasan M, Cidre-Aranaz F, Gerke JS, Ohmura S, Li J, Marchetto A, Henssen AG, Özen Ö, Sugita S, Hasegawa T, Kanaseki T, Bertram S, Dirksen U, Hartmann W, Kirchner T, Grünewald TGP.

Cancers (Basel). 2020 Mar 10;12(3). pii: E644. doi: 10.3390/cancers12030644.

2.

Corrigendum to 'Fungal S-adenosylmethionine synthetase and the control of development and secondary metabolism in Aspergillus nidulans'. [Fungal Genet. Biol. 49 (2012) 443-454].

Gerke J, Bayram Ö, Braus GH.

Fungal Genet Biol. 2020 Mar;136:103331. doi: 10.1016/j.fgb.2019.103331. Epub 2020 Jan 10. No abstract available.

PMID:
31932166
3.

Focal adhesion kinase confers pro-migratory and antiapoptotic properties and is a potential therapeutic target in Ewing sarcoma.

Steinestel K, Trautmann M, Jansen EP, Dirksen U, Rehkämper J, Mikesch JH, Gerke JS, Orth MF, Sannino G, Arteaga MF, Rossig C, Wardelmann E, Grünewald TGP, Hartmann W.

Mol Oncol. 2020 Feb;14(2):248-260. doi: 10.1002/1878-0261.12610. Epub 2019 Dec 21.

4.

Female-Perpetrated Child Sexual Abuse: Prevalence Rates in Germany.

Gerke J, Rassenhofer M, Witt A, Sachser C, Fegert JM.

J Child Sex Abus. 2019 Nov 21:1-15. doi: 10.1080/10538712.2019.1685616. [Epub ahead of print]

PMID:
31751188
5.

Integrative clinical transcriptome analysis reveals TMPRSS2-ERG dependency of prognostic biomarkers in prostate adenocarcinoma.

Gerke JS, Orth MF, Tolkach Y, Romero-Pérez L, Wehweck FS, Stein S, Musa J, Knott MML, Hölting TLB, Li J, Sannino G, Marchetto A, Ohmura S, Cidre-Aranaz F, Müller-Nurasyid M, Strauch K, Stief C, Kristiansen G, Kirchner T, Buchner A, Grünewald TGP.

Int J Cancer. 2020 Apr 1;146(7):2036-2046. doi: 10.1002/ijc.32792. Epub 2019 Nov 29.

PMID:
31732966
6.

Erratum for Gerke et al., "Breaking the Silence: Protein Stabilization Uncovers Silenced Biosynthetic Gene Clusters in the Fungus Aspergillus nidulans".

Gerke J, Bayram Ö, Feussner K, Landesfeind M, Shelest E, Feussner I, Braus GH.

Appl Environ Microbiol. 2019 Nov 14;85(23). pii: e02251-19. doi: 10.1128/AEM.02251-19. Print 2019 Dec 1. No abstract available.

7.

Cooperation of cancer drivers with regulatory germline variants shapes clinical outcomes.

Musa J, Cidre-Aranaz F, Aynaud MM, Orth MF, Knott MML, Mirabeau O, Mazor G, Varon M, Hölting TLB, Grossetête S, Gartlgruber M, Surdez D, Gerke JS, Ohmura S, Marchetto A, Dallmayer M, Baldauf MC, Stein S, Sannino G, Li J, Romero-Pérez L, Westermann F, Hartmann W, Dirksen U, Gymrek M, Anderson ND, Shlien A, Rotblat B, Kirchner T, Delattre O, Grünewald TGP.

Nat Commun. 2019 Sep 11;10(1):4128. doi: 10.1038/s41467-019-12071-2.

8.

Gene expression and immunohistochemical analyses identify SOX2 as major risk factor for overall survival and relapse in Ewing sarcoma patients.

Sannino G, Marchetto A, Ranft A, Jabar S, Zacherl C, Alba-Rubio R, Stein S, Wehweck FS, Kiran MM, Hölting TLB, Musa J, Romero-Pérez L, Cidre-Aranaz F, Knott MML, Li J, Jürgens H, Sastre A, Alonso J, Da Silveira W, Hardiman G, Gerke JS, Orth MF, Hartmann W, Kirchner T, Ohmura S, Dirksen U, Grünewald TGP.

EBioMedicine. 2019 Sep;47:156-162. doi: 10.1016/j.ebiom.2019.08.002. Epub 2019 Aug 16.

9.

Integration of Fungus-Specific CandA-C1 into a Trimeric CandA Complex Allowed Splitting of the Gene for the Conserved Receptor Exchange Factor of CullinA E3 Ubiquitin Ligases in Aspergilli.

Köhler AM, Harting R, Langeneckert AE, Valerius O, Gerke J, Meister C, Strohdiek A, Braus GH.

mBio. 2019 Jun 18;10(3). pii: e01094-19. doi: 10.1128/mBio.01094-19.

10.

Surface Modification of Wood Flour via ARGET ATRP and Its Application as Filler in Thermoplastics.

Kaßel M, Gerke J, Ley A, Vana P.

Polymers (Basel). 2018 Mar 22;10(4). pii: E354. doi: 10.3390/polym10040354.

11.

Targeting the CALCB/RAMP1 axis inhibits growth of Ewing sarcoma.

Dallmayer M, Li J, Ohmura S, Alba Rubio R, Baldauf MC, Hölting TLB, Musa J, Knott MML, Stein S, Cidre-Aranaz F, Wehweck FS, Romero-Pérez L, Gerke JS, Orth MF, Marchetto A, Kirchner T, Bach H, Sannino G, Grünewald TGP.

Cell Death Dis. 2019 Feb 11;10(2):116. doi: 10.1038/s41419-019-1372-0.

12.

Functional genomics identifies AMPD2 as a new prognostic marker for undifferentiated pleomorphic sarcoma.

Orth MF, Gerke JS, Knösel T, Altendorf-Hofmann A, Musa J, Alba-Rubio R, Stein S, Hölting TLB, Cidre-Aranaz F, Romero-Pérez L, Dallmayer M, Baldauf MC, Marchetto A, Sannino G, Knott MML, Wehweck F, Ohmura S, Li J, Hakozaki M, Kirchner T, Dandekar T, Butt E, Grünewald TGP.

Int J Cancer. 2019 Feb 15;144(4):859-867. doi: 10.1002/ijc.31903. Epub 2018 Dec 4.

13.

Systematic identification of cancer-specific MHC-binding peptides with RAVEN.

Baldauf MC, Gerke JS, Kirschner A, Blaeschke F, Effenberger M, Schober K, Rubio RA, Kanaseki T, Kiran MM, Dallmayer M, Musa J, Akpolat N, Akatli AN, Rosman FC, Özen Ö, Sugita S, Hasegawa T, Sugimura H, Baumhoer D, Knott MML, Sannino G, Marchetto A, Li J, Busch DH, Feuchtinger T, Ohmura S, Orth MF, Thiel U, Kirchner T, Grünewald TGP.

Oncoimmunology. 2018 Jul 23;7(9):e1481558. doi: 10.1080/2162402X.2018.1481558. eCollection 2018.

14.

Correction: Velvet domain protein VosA represses the zinc cluster transcription factor SclB regulatory network for Aspergillus nidulans asexual development, oxidative stress response and secondary metabolism.

Thieme KG, Gerke J, Sasse C, Valerius O, Thieme S, Karimi R, Heinrich AK, Finkernagel F, Smith K, Bode HB, Freitag M, Ram AFJ, Braus GH.

PLoS Genet. 2018 Aug 29;14(8):e1007638. doi: 10.1371/journal.pgen.1007638. eCollection 2018 Aug.

15.

Velvet domain protein VosA represses the zinc cluster transcription factor SclB regulatory network for Aspergillus nidulans asexual development, oxidative stress response and secondary metabolism.

Thieme KG, Gerke J, Sasse C, Valerius O, Thieme S, Karimi R, Heinrich AK, Finkernagel F, Smith K, Bode HB, Freitag M, Ram AFJ, Braus GH.

PLoS Genet. 2018 Jul 25;14(7):e1007511. doi: 10.1371/journal.pgen.1007511. eCollection 2018 Jul. Erratum in: PLoS Genet. 2018 Aug 29;14(8):e1007638.

16.

Are EWSR1-NFATc2-positive sarcomas really Ewing sarcomas?

Baldauf MC, Gerke JS, Orth MF, Dallmayer M, Baumhoer D, de Alava E, Hartmann W, Kirchner T, Grünewald TGP.

Mod Pathol. 2018 Jun;31(6):997-999. doi: 10.1038/s41379-018-0009-7. Epub 2018 Jun 12. No abstract available.

17.

Robust diagnosis of Ewing sarcoma by immunohistochemical detection of super-enhancer-driven EWSR1-ETS targets.

Baldauf MC, Orth MF, Dallmayer M, Marchetto A, Gerke JS, Rubio RA, Kiran MM, Musa J, Knott MML, Ohmura S, Li J, Akpolat N, Akatli AN, Özen Ö, Dirksen U, Hartmann W, de Alava E, Baumhoer D, Sannino G, Kirchner T, Grünewald TGP.

Oncotarget. 2017 Aug 4;9(2):1587-1601. doi: 10.18632/oncotarget.20098. eCollection 2018 Jan 5.

18.

Parent-progeny imputation from pooled samples for cost-efficient genotyping in plant breeding.

Technow F, Gerke J.

PLoS One. 2017 Dec 22;12(12):e0190271. doi: 10.1371/journal.pone.0190271. eCollection 2017.

19.

[Basic questionnaire and methodological criteria for Surveys on Working Conditions, Employment, and Health in Latin America and the Caribbean].

Benavides FG, Merino-Salazar P, Cornelio C, Assunção AA, Agudelo-Suárez AA, Amable M, Artazcoz L, Astete J, Barraza D, Berhó F, Milián LC, Delclòs G, Funcasta L, Gerke J, Gimeno D, Itatí-Iñiguez MJ, Lima EP, Martínez-Iñigo D, Medeiros AM, Orta L, Pinilla J, Rodrigo F, Rojas M, Sabastizagal I, Vallebuona C, Vermeylen G, Villalobos GH, Vives A.

Cad Saude Publica. 2016 Oct 10;32(9):e00210715. doi: 10.1590/0102-311X00210715. Spanish.

20.

Lysosome-associated membrane glycoprotein 1 predicts fratricide amongst T cell receptor transgenic CD8+ T cells directed against tumor-associated antigens.

Kirschner A, Thiede M, Blaeschke F, Richter GH, Gerke JS, Baldauf MC, Grünewald TG, Busch DH, Burdach S, Thiel U.

Oncotarget. 2016 Aug 30;7(35):56584-56597. doi: 10.18632/oncotarget.10647.

21.

Transcription Factor SomA Is Required for Adhesion, Development and Virulence of the Human Pathogen Aspergillus fumigatus.

Lin CJ, Sasse C, Gerke J, Valerius O, Irmer H, Frauendorf H, Heinekamp T, Straßburger M, Tran VT, Herzog B, Braus-Stromeyer SA, Braus GH.

PLoS Pathog. 2015 Nov 3;11(11):e1005205. doi: 10.1371/journal.ppat.1005205. eCollection 2015.

22.

The Genomic Impacts of Drift and Selection for Hybrid Performance in Maize.

Gerke JP, Edwards JW, Guill KE, Ross-Ibarra J, McMullen MD.

Genetics. 2015 Nov;201(3):1201-11. doi: 10.1534/genetics.115.182410. Epub 2015 Sep 18.

23.

Fall prevention and bathroom safety in the epilepsy monitoring unit.

Spritzer SD, Riordan KC, Berry J, Corbett BM, Gerke JK, Hoerth MT, Crepeau AZ, Drazkowski JF, Sirven JI, Noe KH.

Epilepsy Behav. 2015 Jul;48:75-8. doi: 10.1016/j.yebeh.2015.05.026. Epub 2015 Jun 11.

PMID:
26074343
24.

A Powerful New Quantitative Genetics Platform, Combining Caenorhabditis elegans High-Throughput Fitness Assays with a Large Collection of Recombinant Strains.

Andersen EC, Shimko TC, Crissman JR, Ghosh R, Bloom JS, Seidel HS, Gerke JP, Kruglyak L.

G3 (Bethesda). 2015 Mar 13;5(5):911-20. doi: 10.1534/g3.115.017178.

25.
26.

Manipulation of fungal development as source of novel secondary metabolites for biotechnology.

Gerke J, Braus GH.

Appl Microbiol Biotechnol. 2014 Oct;98(20):8443-55. doi: 10.1007/s00253-014-5997-8. Epub 2014 Aug 21. Review.

27.

LocTree3 prediction of localization.

Goldberg T, Hecht M, Hamp T, Karl T, Yachdav G, Ahmed N, Altermann U, Angerer P, Ansorge S, Balasz K, Bernhofer M, Betz A, Cizmadija L, Do KT, Gerke J, Greil R, Joerdens V, Hastreiter M, Hembach K, Herzog M, Kalemanov M, Kluge M, Meier A, Nasir H, Neumaier U, Prade V, Reeb J, Sorokoumov A, Troshani I, Vorberg S, Waldraff S, Zierer J, Nielsen H, Rost B.

Nucleic Acids Res. 2014 Jul;42(Web Server issue):W350-5. doi: 10.1093/nar/gku396. Epub 2014 May 21.

28.

A variant in the neuropeptide receptor npr-1 is a major determinant of Caenorhabditis elegans growth and physiology.

Andersen EC, Bloom JS, Gerke JP, Kruglyak L.

PLoS Genet. 2014 Feb 27;10(2):e1004156. doi: 10.1371/journal.pgen.1004156. eCollection 2014 Feb. Erratum in: PLoS Genet. 2014 Mar;10(3):e1004316.

29.

The velvet family of fungal regulators contains a DNA-binding domain structurally similar to NF-κB.

Ahmed YL, Gerke J, Park HS, Bayram Ö, Neumann P, Ni M, Dickmanns A, Kim SC, Yu JH, Braus GH, Ficner R.

PLoS Biol. 2013 Dec;11(12):e1001750. doi: 10.1371/journal.pbio.1001750. Epub 2013 Dec 31. Erratum in: PLoS Biol. 2014 Apr;12(4):e1001849.

30.

Breaking the silence: protein stabilization uncovers silenced biosynthetic gene clusters in the fungus Aspergillus nidulans.

Gerke J, Bayram O, Feussner K, Landesfeind M, Shelest E, Feussner I, Braus GH.

Appl Environ Microbiol. 2012 Dec;78(23):8234-44. doi: 10.1128/AEM.01808-12. Epub 2012 Sep 21. Erratum in: Appl Environ Microbiol. 2019 Nov 14;85(23):.

31.

Fungal S-adenosylmethionine synthetase and the control of development and secondary metabolism in Aspergillus nidulans.

Gerke J, Bayram O, Braus GH.

Fungal Genet Biol. 2012 Jun;49(6):443-54. doi: 10.1016/j.fgb.2012.04.003. Epub 2012 Apr 26. Erratum in: Fungal Genet Biol. 2020 Mar;136:103331.

PMID:
22561085
32.

Environmental health internship essentials.

Choo A, Gerke J, Sellers V, Syed M.

J Environ Health. 2012 Jan-Feb;74(6):52-3. No abstract available.

PMID:
22329209
33.

Natural variation in a chloride channel subunit confers avermectin resistance in C. elegans.

Ghosh R, Andersen EC, Shapiro JA, Gerke JP, Kruglyak L.

Science. 2012 Feb 3;335(6068):574-8. doi: 10.1126/science.1214318.

34.

Chromosome-scale selective sweeps shape Caenorhabditis elegans genomic diversity.

Andersen EC, Gerke JP, Shapiro JA, Crissman JR, Ghosh R, Bloom JS, Félix MA, Kruglyak L.

Nat Genet. 2012 Jan 29;44(3):285-90. doi: 10.1038/ng.1050.

35.

LaeA control of velvet family regulatory proteins for light-dependent development and fungal cell-type specificity.

Sarikaya Bayram O, Bayram O, Valerius O, Park HS, Irniger S, Gerke J, Ni M, Han KH, Yu JH, Braus GH.

PLoS Genet. 2010 Dec 2;6(12):e1001226. doi: 10.1371/journal.pgen.1001226.

36.

The COP9 signalosome mediates transcriptional and metabolic response to hormones, oxidative stress protection and cell wall rearrangement during fungal development.

Nahlik K, Dumkow M, Bayram O, Helmstaedt K, Busch S, Valerius O, Gerke J, Hoppert M, Schwier E, Opitz L, Westermann M, Grond S, Feussner K, Goebel C, Kaever A, Meinicke P, Feussner I, Braus GH.

Mol Microbiol. 2010 Nov;78(4):964-79. doi: 10.1111/j.1365-2958.2010.07384.x. Epub 2010 Sep 27.

37.

Gene-environment interactions at nucleotide resolution.

Gerke J, Lorenz K, Ramnarine S, Cohen B.

PLoS Genet. 2010 Sep 30;6(9):e1001144. doi: 10.1371/journal.pgen.1001144.

38.

Epistasis in a quantitative trait captured by a molecular model of transcription factor interactions.

Gertz J, Gerke JP, Cohen BA.

Theor Popul Biol. 2010 Feb;77(1):1-5. doi: 10.1016/j.tpb.2009.10.002. Epub 2009 Oct 8.

39.

Genetic dissection of complex traits in yeast: insights from studies of gene expression and other phenotypes in the BYxRM cross.

Ehrenreich IM, Gerke JP, Kruglyak L.

Cold Spring Harb Symp Quant Biol. 2009;74:145-53. doi: 10.1101/sqb.2009.74.013. Epub 2009 Sep 4. Review.

40.

Genetic interactions between transcription factors cause natural variation in yeast.

Gerke J, Lorenz K, Cohen B.

Science. 2009 Jan 23;323(5913):498-501. doi: 10.1126/science.1166426.

41.

Natural isolates of Saccharomyces cerevisiae display complex genetic variation in sporulation efficiency.

Gerke JP, Chen CT, Cohen BA.

Genetics. 2006 Oct;174(2):985-97. Epub 2006 Sep 1.

42.

Oral vaccination and multivalent vaccine against Pseudomonas aeruginosa keratitis.

Gerke JR, Nelson JS.

Invest Ophthalmol Vis Sci. 1977 Jan;16(1):76-80.

PMID:
832968
43.

Using the mouse eye for teaching biomicroscopy.

Matti R, Clements O, Sanchez R, Friedman L, Furie A, Gerke J.

Am J Optom Arch Am Acad Optom. 1972 Nov;49(11):956-60. No abstract available.

PMID:
4508241
44.

[Special chewing gum in oral hygiene].

Gerke J.

ZWR. 1972 Mar 25;81(6):274-5. German. No abstract available.

PMID:
4502137
45.

Experimental Pseudomonas aeruginosa Infection of the Mouse Cornea.

Gerke JR, Magliocco MV.

Infect Immun. 1971 Feb;3(2):209-16.

46.

[Epithetic-prosthetic treatment of face-jaw defects].

Gerke J.

Asthet Med (Berl). 1968;17(7):157-64. German. No abstract available.

PMID:
5305420
48.

Application of automated analysis to the study of bacterial growth. I. The instrumental system.

Ferrari A, Gerke JR, Watson RW, Umbreit WW.

Ann N Y Acad Sci. 1965 Nov 9;130(2):704-21. No abstract available.

PMID:
5324766
49.

Factors influencing automated microbiological assays.

GERKE JR, HANEY TA, PAGANO JF.

Ann N Y Acad Sci. 1962 Aug 20;93:640-3. No abstract available.

PMID:
13960483
50.

Automated microbiological analyses for tetracycline and polyenes.

HANEY TA, GERKE JR, MADIGAN ME, PAGANO JF.

Ann N Y Acad Sci. 1962 Aug 20;93:627-39. No abstract available.

PMID:
13952515

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