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Items: 4

1.

Generating dynamical neuroimaging spatiotemporal representations (DyNeuSR) using topological data analysis.

Geniesse C, Sporns O, Petri G, Saggar M.

Netw Neurosci. 2019 Jul 1;3(3):763-778. doi: 10.1162/netn_a_00093. eCollection 2019.

2.

Blind prediction of noncanonical RNA structure at atomic accuracy.

Watkins AM, Geniesse C, Kladwang W, Zakrevsky P, Jaeger L, Das R.

Sci Adv. 2018 May 25;4(5):eaar5316. doi: 10.1126/sciadv.aar5316. eCollection 2018 May.

3.

MoleculeNet: a benchmark for molecular machine learning.

Wu Z, Ramsundar B, Feinberg EN, Gomes J, Geniesse C, Pappu AS, Leswing K, Pande V.

Chem Sci. 2017 Oct 31;9(2):513-530. doi: 10.1039/c7sc02664a. eCollection 2018 Jan 14.

4.

RNA-Puzzles Round III: 3D RNA structure prediction of five riboswitches and one ribozyme.

Miao Z, Adamiak RW, Antczak M, Batey RT, Becka AJ, Biesiada M, Boniecki MJ, Bujnicki JM, Chen SJ, Cheng CY, Chou FC, Ferré-D'Amaré AR, Das R, Dawson WK, Ding F, Dokholyan NV, Dunin-Horkawicz S, Geniesse C, Kappel K, Kladwang W, Krokhotin A, Łach GE, Major F, Mann TH, Magnus M, Pachulska-Wieczorek K, Patel DJ, Piccirilli JA, Popenda M, Purzycka KJ, Ren A, Rice GM, Santalucia J Jr, Sarzynska J, Szachniuk M, Tandon A, Trausch JJ, Tian S, Wang J, Weeks KM, Williams B 2nd, Xiao Y, Xu X, Zhang D, Zok T, Westhof E.

RNA. 2017 May;23(5):655-672. doi: 10.1261/rna.060368.116. Epub 2017 Jan 30.

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