Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 18

1.

Acoel genome reveals the regulatory landscape of whole-body regeneration.

Gehrke AR, Neverett E, Luo YJ, Brandt A, Ricci L, Hulett RE, Gompers A, Ruby JG, Rokhsar DS, Reddien PW, Srivastava M.

Science. 2019 Mar 15;363(6432). pii: eaau6173. doi: 10.1126/science.aau6173.

PMID:
30872491
2.

Digits and fin rays share common developmental histories.

Nakamura T, Gehrke AR, Lemberg J, Szymaszek J, Shubin NH.

Nature. 2016 Sep 8;537(7619):225-228. doi: 10.1038/nature19322. Epub 2016 Aug 17.

3.

Neoblasts and the evolution of whole-body regeneration.

Gehrke AR, Srivastava M.

Curr Opin Genet Dev. 2016 Oct;40:131-137. doi: 10.1016/j.gde.2016.07.009. Epub 2016 Aug 4. Review.

PMID:
27498025
4.

Corrigendum: The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons.

Braasch I, Gehrke AR, Smith JJ, Kawasaki K, Manousaki T, Pasquier J, Amores A, Desvignes T, Batzel P, Catchen J, Berlin AM, Campbell MS, Barrell D, Martin KJ, Mulley JF, Ravi V, Lee AP, Nakamura T, Chalopin D, Fan S, Wcisel D, Cañestro C, Sydes J, Beaudry FE, Sun Y, Hertel J, Beam MJ, Fasold M, Ishiyama M, Johnson J, Kehr S, Lara M, Letaw JH, Litman GW, Litman RT, Mikami M, Ota T, Saha NR, Williams L, Stadler PF, Wang H, Taylor JS, Fontenot Q, Ferrara A, Searle SM, Aken B, Yandell M, Schneider I, Yoder JA, Volff JN, Meyer A, Amemiya CT, Venkatesh B, Holland PW, Guiguen Y, Bobe J, Shubin NH, Di Palma F, Alfo Ldi J, Lindblad-Toh K, Postlethwait JH.

Nat Genet. 2016 May 27;48(6):700. doi: 10.1038/ng0616-700c. No abstract available.

PMID:
27230688
5.

The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons.

Braasch I, Gehrke AR, Smith JJ, Kawasaki K, Manousaki T, Pasquier J, Amores A, Desvignes T, Batzel P, Catchen J, Berlin AM, Campbell MS, Barrell D, Martin KJ, Mulley JF, Ravi V, Lee AP, Nakamura T, Chalopin D, Fan S, Wcisel D, Cañestro C, Sydes J, Beaudry FE, Sun Y, Hertel J, Beam MJ, Fasold M, Ishiyama M, Johnson J, Kehr S, Lara M, Letaw JH, Litman GW, Litman RT, Mikami M, Ota T, Saha NR, Williams L, Stadler PF, Wang H, Taylor JS, Fontenot Q, Ferrara A, Searle SM, Aken B, Yandell M, Schneider I, Yoder JA, Volff JN, Meyer A, Amemiya CT, Venkatesh B, Holland PW, Guiguen Y, Bobe J, Shubin NH, Di Palma F, Alföldi J, Lindblad-Toh K, Postlethwait JH.

Nat Genet. 2016 Apr;48(4):427-37. doi: 10.1038/ng.3526. Epub 2016 Mar 7.

6.

Cis-regulatory programs in the development and evolution of vertebrate paired appendages.

Gehrke AR, Shubin NH.

Semin Cell Dev Biol. 2016 Sep;57:31-39. doi: 10.1016/j.semcdb.2016.01.015. Epub 2016 Jan 16. Review.

7.

Molecular mechanisms underlying the exceptional adaptations of batoid fins.

Nakamura T, Klomp J, Pieretti J, Schneider I, Gehrke AR, Shubin NH.

Proc Natl Acad Sci U S A. 2015 Dec 29;112(52):15940-5. doi: 10.1073/pnas.1521818112. Epub 2015 Dec 7.

8.

Organogenesis in deep time: A problem in genomics, development, and paleontology.

Pieretti J, Gehrke AR, Schneider I, Adachi N, Nakamura T, Shubin NH.

Proc Natl Acad Sci U S A. 2015 Apr 21;112(16):4871-6. doi: 10.1073/pnas.1403665112.

9.

Deep conservation of wrist and digit enhancers in fish.

Gehrke AR, Schneider I, de la Calle-Mustienes E, Tena JJ, Gomez-Marin C, Chandran M, Nakamura T, Braasch I, Postlethwait JH, Gómez-Skarmeta JL, Shubin NH.

Proc Natl Acad Sci U S A. 2015 Jan 20;112(3):803-8. doi: 10.1073/pnas.1420208112. Epub 2014 Dec 22.

10.

Appendage expression driven by the Hoxd Global Control Region is an ancient gnathostome feature.

Schneider I, Aneas I, Gehrke AR, Dahn RD, Nobrega MA, Shubin NH.

Proc Natl Acad Sci U S A. 2011 Aug 2;108(31):12782-6. doi: 10.1073/pnas.1109993108. Epub 2011 Jul 15.

11.

LUX ARRHYTHMO encodes a nighttime repressor of circadian gene expression in the Arabidopsis core clock.

Helfer A, Nusinow DA, Chow BY, Gehrke AR, Bulyk ML, Kay SA.

Curr Biol. 2011 Jan 25;21(2):126-33. doi: 10.1016/j.cub.2010.12.021. Epub 2011 Jan 13.

12.

Objective sequence-based subfamily classifications of mouse homeodomains reflect their in vitro DNA-binding preferences.

Santos MA, Turinsky AL, Ong S, Tsai J, Berger MF, Badis G, Talukder S, Gehrke AR, Bulyk ML, Hughes TR, Wodak SJ.

Nucleic Acids Res. 2010 Dec;38(22):7927-42. doi: 10.1093/nar/gkq714. Epub 2010 Aug 12.

13.

Genome-wide analysis of ETS-family DNA-binding in vitro and in vivo.

Wei GH, Badis G, Berger MF, Kivioja T, Palin K, Enge M, Bonke M, Jolma A, Varjosalo M, Gehrke AR, Yan J, Talukder S, Turunen M, Taipale M, Stunnenberg HG, Ukkonen E, Hughes TR, Bulyk ML, Taipale J.

EMBO J. 2010 Jul 7;29(13):2147-60. doi: 10.1038/emboj.2010.106. Epub 2010 Jun 1.

14.

Diversity and complexity in DNA recognition by transcription factors.

Badis G, Berger MF, Philippakis AA, Talukder S, Gehrke AR, Jaeger SA, Chan ET, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang CF, Coburn D, Newburger DE, Morris Q, Hughes TR, Bulyk ML.

Science. 2009 Jun 26;324(5935):1720-3. doi: 10.1126/science.1162327. Epub 2009 May 14.

15.

Transcriptional regulation and stabilization of left-right neuronal identity in C. elegans.

Lesch BJ, Gehrke AR, Bulyk ML, Bargmann CI.

Genes Dev. 2009 Feb 1;23(3):345-58. doi: 10.1101/gad.1763509.

16.

Predicting the binding preference of transcription factors to individual DNA k-mers.

Alleyne TM, Peña-Castillo L, Badis G, Talukder S, Berger MF, Gehrke AR, Philippakis AA, Bulyk ML, Morris QD, Hughes TR.

Bioinformatics. 2009 Apr 15;25(8):1012-8. doi: 10.1093/bioinformatics/btn645. Epub 2008 Dec 16.

17.

Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences.

Berger MF, Badis G, Gehrke AR, Talukder S, Philippakis AA, Peña-Castillo L, Alleyne TM, Mnaimneh S, Botvinnik OB, Chan ET, Khalid F, Zhang W, Newburger D, Jaeger SA, Morris QD, Bulyk ML, Hughes TR.

Cell. 2008 Jun 27;133(7):1266-76. doi: 10.1016/j.cell.2008.05.024.

18.

Specific DNA-binding by apicomplexan AP2 transcription factors.

De Silva EK, Gehrke AR, Olszewski K, León I, Chahal JS, Bulyk ML, Llinás M.

Proc Natl Acad Sci U S A. 2008 Jun 17;105(24):8393-8. doi: 10.1073/pnas.0801993105. Epub 2008 Jun 9.

Supplemental Content

Loading ...
Support Center