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Items: 37

1.

Deleterious Mutation Burden and Its Association with Complex Traits in Sorghum (Sorghum bicolor).

Valluru R, Gazave EE, Fernandes SB, Ferguson JN, Lozano R, Hirannaiah P, Zuo T, Brown PJ, Leakey ADB, Gore MA, Buckler ES, Bandillo N.

Genetics. 2019 Mar;211(3):1075-1087. doi: 10.1534/genetics.118.301742. Epub 2019 Jan 8.

PMID:
30622134
2.

Morphological, cellular and molecular characterization of posterior regeneration in the marine annelid Platynereis dumerilii.

Planques A, Malem J, Parapar J, Vervoort M, Gazave E.

Dev Biol. 2019 Jan 15;445(2):189-210. doi: 10.1016/j.ydbio.2018.11.004. Epub 2018 Nov 13.

PMID:
30445055
3.

A community resource for exploring and utilizing genetic diversity in the USDA pea single plant plus collection.

Holdsworth WL, Gazave E, Cheng P, Myers JR, Gore MA, Coyne CJ, McGee RJ, Mazourek M.

Hortic Res. 2017 Apr 26;4:17017. doi: 10.1038/hortres.2017.17. eCollection 2017.

4.

Temporal Genetic Dynamics of an Experimental, Biparental Field Population of Phytophthora capsici.

Carlson MO, Gazave E, Gore MA, Smart CD.

Front Genet. 2017 Mar 13;8:26. doi: 10.3389/fgene.2017.00026. eCollection 2017.

5.

Population Structure and Phylogenetic Relationships in a Diverse Panel of Brassica rapa L.

Bird KA, An H, Gazave E, Gore MA, Pires JC, Robertson LD, Labate JA.

Front Plant Sci. 2017 Mar 13;8:321. doi: 10.3389/fpls.2017.00321. eCollection 2017.

6.

The Notch pathway in the annelid Platynereis: insights into chaetogenesis and neurogenesis processes.

Gazave E, Lemaître QI, Balavoine G.

Open Biol. 2017 Feb;7(2). pii: 160242. doi: 10.1098/rsob.160242.

7.

The Conservation of the Germline Multipotency Program, from Sponges to Vertebrates: A Stepping Stone to Understanding the Somatic and Germline Origins.

Fierro-Constaín L, Schenkelaars Q, Gazave E, Haguenauer A, Rocher C, Ereskovsky A, Borchiellini C, Renard E.

Genome Biol Evol. 2017 Mar 1;9(3):474-488. doi: 10.1093/gbe/evw289.

8.

Population Genomic Analysis Reveals Differential Evolutionary Histories and Patterns of Diversity across Subgenomes and Subpopulations of Brassica napus L.

Gazave E, Tassone EE, Ilut DC, Wingerson M, Datema E, Witsenboer HM, Davis JB, Grant D, Dyer JM, Jenks MA, Brown J, Gore MA.

Front Plant Sci. 2016 Apr 21;7:525. doi: 10.3389/fpls.2016.00525. eCollection 2016.

9.

Field-Based High-Throughput Plant Phenotyping Reveals the Temporal Patterns of Quantitative Trait Loci Associated with Stress-Responsive Traits in Cotton.

Pauli D, Andrade-Sanchez P, Carmo-Silva AE, Gazave E, French AN, Heun J, Hunsaker DJ, Lipka AE, Setter TL, Strand RJ, Thorp KR, Wang S, White JW, Gore MA.

G3 (Bethesda). 2016 Apr 7;6(4):865-79. doi: 10.1534/g3.115.023515.

10.

Genetic Diversity of the Two Commercial Tetraploid Cotton Species in the Gossypium Diversity Reference Set.

Hinze LL, Gazave E, Gore MA, Fang DD, Scheffler BE, Yu JZ, Jones DC, Frelichowski J, Percy RG.

J Hered. 2016 May;107(3):274-86. doi: 10.1093/jhered/esw004. Epub 2016 Jan 16. Erratum in: J Hered. 2016 Sep;107(5):478.

11.

Oscarella lobularis (Homoscleromorpha, Porifera) Regeneration: Epithelial Morphogenesis and Metaplasia.

Ereskovsky AV, Borisenko IE, Lapébie P, Gazave E, Tokina DB, Borchiellini C.

PLoS One. 2015 Aug 13;10(8):e0134566. doi: 10.1371/journal.pone.0134566. eCollection 2015.

12.

Population genomic analysis of 962 whole genome sequences of humans reveals natural selection in non-coding regions.

Yu F, Lu J, Liu X, Gazave E, Chang D, Raj S, Hunter-Zinck H, Blekhman R, Arbiza L, Van Hout C, Morrison A, Johnson AD, Bis J, Cupples LA, Psaty BM, Muzny D, Yu J, Gibbs RA, Keinan A, Clark AG, Boerwinkle E.

PLoS One. 2015 Mar 25;10(3):e0121644. doi: 10.1371/journal.pone.0121644. eCollection 2015.

13.

History of a prolific family: the Hes/Hey-related genes of the annelid Platynereis.

Gazave E, Guillou A, Balavoine G.

Evodevo. 2014 Sep 5;5:29. doi: 10.1186/2041-9139-5-29. eCollection 2014.

14.

Neutral genomic regions refine models of recent rapid human population growth.

Gazave E, Ma L, Chang D, Coventry A, Gao F, Muzny D, Boerwinkle E, Gibbs RA, Sing CF, Clark AG, Keinan A.

Proc Natl Acad Sci U S A. 2014 Jan 14;111(2):757-62. doi: 10.1073/pnas.1310398110. Epub 2013 Dec 30.

15.

Population growth inflates the per-individual number of deleterious mutations and reduces their mean effect.

Gazave E, Chang D, Clark AG, Keinan A.

Genetics. 2013 Nov;195(3):969-78. doi: 10.1534/genetics.113.153973. Epub 2013 Aug 26.

16.

Posterior elongation in the annelid Platynereis dumerilii involves stem cells molecularly related to primordial germ cells.

Gazave E, Béhague J, Laplane L, Guillou A, Préau L, Demilly A, Balavoine G, Vervoort M.

Dev Biol. 2013 Oct 1;382(1):246-67. doi: 10.1016/j.ydbio.2013.07.013. Epub 2013 Jul 25.

17.

Systematics and molecular phylogeny of the family oscarellidae (homoscleromorpha) with description of two new oscarella species.

Gazave E, Lavrov DV, Cabrol J, Renard E, Rocher C, Vacelet J, Adamska M, Borchiellini C, Ereskovsky AV.

PLoS One. 2013 May 30;8(5):e63976. doi: 10.1371/journal.pone.0063976. Print 2013.

18.

Involvement of the Wnt/β-catenin pathway in neurectoderm architecture in Platynereis dumerilii.

Demilly A, Steinmetz P, Gazave E, Marchand L, Vervoort M.

Nat Commun. 2013;4:1915. doi: 10.1038/ncomms2915.

PMID:
23715274
19.

Copy number variation analysis in the great apes reveals species-specific patterns of structural variation.

Gazave E, Darré F, Morcillo-Suarez C, Petit-Marty N, Carreño A, Marigorta UM, Ryder OA, Blancher A, Rocchi M, Bosch E, Baker C, Marquès-Bonet T, Eichler EE, Navarro A.

Genome Res. 2011 Oct;21(10):1626-39. doi: 10.1101/gr.117242.110. Epub 2011 Aug 8.

20.

Comparative and demographic analysis of orang-utan genomes.

Locke DP, Hillier LW, Warren WC, Worley KC, Nazareth LV, Muzny DM, Yang SP, Wang Z, Chinwalla AT, Minx P, Mitreva M, Cook L, Delehaunty KD, Fronick C, Schmidt H, Fulton LA, Fulton RS, Nelson JO, Magrini V, Pohl C, Graves TA, Markovic C, Cree A, Dinh HH, Hume J, Kovar CL, Fowler GR, Lunter G, Meader S, Heger A, Ponting CP, Marques-Bonet T, Alkan C, Chen L, Cheng Z, Kidd JM, Eichler EE, White S, Searle S, Vilella AJ, Chen Y, Flicek P, Ma J, Raney B, Suh B, Burhans R, Herrero J, Haussler D, Faria R, Fernando O, Darré F, Farré D, Gazave E, Oliva M, Navarro A, Roberto R, Capozzi O, Archidiacono N, Della Valle G, Purgato S, Rocchi M, Konkel MK, Walker JA, Ullmer B, Batzer MA, Smit AF, Hubley R, Casola C, Schrider DR, Hahn MW, Quesada V, Puente XS, Ordoñez GR, López-Otín C, Vinar T, Brejova B, Ratan A, Harris RS, Miller W, Kosiol C, Lawson HA, Taliwal V, Martins AL, Siepel A, Roychoudhury A, Ma X, Degenhardt J, Bustamante CD, Gutenkunst RN, Mailund T, Dutheil JY, Hobolth A, Schierup MH, Ryder OA, Yoshinaga Y, de Jong PJ, Weinstock GM, Rogers J, Mardis ER, Gibbs RA, Wilson RK.

Nature. 2011 Jan 27;469(7331):529-33. doi: 10.1038/nature09687.

21.

Molecular phylogeny restores the supra-generic subdivision of homoscleromorph sponges (Porifera, Homoscleromorpha).

Gazave E, Lapébie P, Renard E, Vacelet J, Rocher C, Ereskovsky AV, Lavrov DV, Borchiellini C.

PLoS One. 2010 Dec 14;5(12):e14290. doi: 10.1371/journal.pone.0014290.

22.

Selection upon genome architecture: conservation of functional neighborhoods with changing genes.

Al-Shahrour F, Minguez P, Marqués-Bonet T, Gazave E, Navarro A, Dopazo J.

PLoS Comput Biol. 2010 Oct 7;6(10):e1000953. doi: 10.1371/journal.pcbi.1000953.

23.

Polyphyly of the genus Axinella and of the family Axinellidae (Porifera: Demospongiaep).

Gazave E, Carteron S, Chenuil A, Richelle-Maurer E, Boury-Esnault N, Borchiellini C.

Mol Phylogenet Evol. 2010 Oct;57(1):35-47. doi: 10.1016/j.ympev.2010.05.028. Epub 2010 Jun 9.

PMID:
20541021
24.

Origin and evolution of the Notch signalling pathway: an overview from eukaryotic genomes.

Gazave E, Lapébie P, Richards GS, Brunet F, Ereskovsky AV, Degnan BM, Borchiellini C, Vervoort M, Renard E.

BMC Evol Biol. 2009 Oct 13;9:249. doi: 10.1186/1471-2148-9-249.

25.

Origin of the neuro-sensory system: new and expected insights from sponges.

Renard E, Vacelet J, Gazave E, Lapébie P, Borchiellini C, Ereskovsky AV.

Integr Zool. 2009 Sep;4(3):294-308. doi: 10.1111/j.1749-4877.2009.00167.x. Review.

26.

WNT/beta-catenin signalling and epithelial patterning in the homoscleromorph sponge Oscarella.

Lapébie P, Gazave E, Ereskovsky A, Derelle R, Bézac C, Renard E, Houliston E, Borchiellini C.

PLoS One. 2009 Jun 8;4(6):e5823. doi: 10.1371/journal.pone.0005823.

27.

The Homoscleromorph sponge Oscarella lobularis, a promising sponge model in evolutionary and developmental biology: model sponge Oscarella lobularis.

Ereskovsky AV, Borchiellini C, Gazave E, Ivanisevic J, Lapébie P, Perez T, Renard E, Vacelet J.

Bioessays. 2009 Jan;31(1):89-97. doi: 10.1002/bies.080058. Review.

PMID:
19154007
28.

Allele-specific gene expression is widespread across the genome and biological processes.

Palacios R, Gazave E, Goñi J, Piedrafita G, Fernando O, Navarro A, Villoslada P.

PLoS One. 2009;4(1):e4150. doi: 10.1371/journal.pone.0004150. Epub 2009 Jan 7.

29.

NK homeobox genes with choanocyte-specific expression in homoscleromorph sponges.

Gazave E, Lapébie P, Renard E, Bézac C, Boury-Esnault N, Vacelet J, Pérez T, Manuel M, Borchiellini C.

Dev Genes Evol. 2008 Sep;218(9):479-89. doi: 10.1007/s00427-008-0242-z. Epub 2008 Aug 14.

PMID:
18704494
30.

SNP analysis to results (SNPator): a web-based environment oriented to statistical genomics analyses upon SNP data.

Morcillo-Suarez C, Alegre J, Sangros R, Gazave E, de Cid R, Milne R, Amigo J, Ferrer-Admetlla A, Moreno-Estrada A, Gardner M, Casals F, Pérez-Lezaun A, Comas D, Bosch E, Calafell F, Bertranpetit J, Navarro A.

Bioinformatics. 2008 Jul 15;24(14):1643-4. doi: 10.1093/bioinformatics/btn241. Epub 2008 May 30.

PMID:
18515823
31.

On the association between chromosomal rearrangements and genic evolution in humans and chimpanzees.

Marques-Bonet T, Sànchez-Ruiz J, Armengol L, Khaja R, Bertranpetit J, Lopez-Bigas N, Rocchi M, Gazave E, Navarro A.

Genome Biol. 2007;8(10):R230.

32.

Patterns and rates of intron divergence between humans and chimpanzees.

Gazave E, Marqués-Bonet T, Fernando O, Charlesworth B, Navarro A.

Genome Biol. 2007;8(2):R21.

33.

Chromosomal phylogeny of Robertsonian races of the house mouse on the island of Madeira: testing between alternative mutational processes.

Britton-Davidian J, Catalan J, da Graça Ramalhinho M, Auffray JC, Claudia Nunes A, Gazave E, Searle JB, da Luz Mathias M.

Genet Res. 2005 Dec;86(3):171-83. Epub 2005 Nov 23.

PMID:
16303058
34.

Does radial nuclear organisation influence DNA damage?

Gazave E, Gautier P, Gilchrist S, Bickmore WA.

Chromosome Res. 2005;13(4):377-88.

PMID:
15973502
35.

Inversions with classical style and trendy lines.

Navarro A, Gazave E.

Nat Genet. 2005 Feb;37(2):115-6. No abstract available.

PMID:
15678139
36.

The non-random occurrence of Robertsonian fusion in the house mouse.

Gazave E, Catalan J, Ramalhinho Mda G, Mathias Mda L, Nunes AC, Dumas D, Britton-Davidian J, Auffray JC.

Genet Res. 2003 Feb;81(1):33-42.

PMID:
12693681
37.

Dissecting the cost of insecticide resistance genes during the overwintering period of the mosquito Culex pipiens.

Gazave E, Chevillon C, Lenormand T, Marquine M, Raymond M.

Heredity (Edinb). 2001 Oct;87(Pt 4):441-8.

PMID:
11737292

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