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Items: 15

1.

Erratum for Inomura et al., "Quantifying Oxygen Management and Temperature and Light Dependencies of Nitrogen Fixation by Crocosphaera watsonii".

Inomura K, Deutsch C, Wilson ST, Masuda T, Lawrenz E, Bučinská L, Sobotka R, Gauglitz JM, Saito MA, Prášil O, Follows MJ.

mSphere. 2020 Feb 5;5(1). pii: e00075-20. doi: 10.1128/mSphere.00075-20. No abstract available.

2.

A UHPLC-HRMS based metabolomics and chemoinformatics approach to chemically distinguish 'super foods' from a variety of plant-based foods.

Di Ottavio F, Gauglitz JM, Ernst M, Panitchpakdi MW, Fanti F, Compagnone D, Dorrestein PC, Sergi M.

Food Chem. 2020 May 30;313:126071. doi: 10.1016/j.foodchem.2019.126071. Epub 2019 Dec 24.

PMID:
31927204
3.

Mass spectrometry searches using MASST.

Wang M, Jarmusch AK, Vargas F, Aksenov AA, Gauglitz JM, Weldon K, Petras D, da Silva R, Quinn R, Melnik AV, van der Hooft JJJ, Caraballo-Rodríguez AM, Nothias LF, Aceves CM, Panitchpakdi M, Brown E, Di Ottavio F, Sikora N, Elijah EO, Labarta-Bajo L, Gentry EC, Shalapour S, Kyle KE, Puckett SP, Watrous JD, Carpenter CS, Bouslimani A, Ernst M, Swafford AD, Zúñiga EI, Balunas MJ, Klassen JL, Loomba R, Knight R, Bandeira N, Dorrestein PC.

Nat Biotechnol. 2020 Jan;38(1):23-26. doi: 10.1038/s41587-019-0375-9. No abstract available.

PMID:
31894142
4.

Quantifying Oxygen Management and Temperature and Light Dependencies of Nitrogen Fixation by Crocosphaera watsonii.

Inomura K, Deutsch C, Wilson ST, Masuda T, Lawrenz E, Lenka B, Sobotka R, Gauglitz JM, Saito MA, Prášil O, Follows MJ.

mSphere. 2019 Dec 11;4(6). pii: e00531-19. doi: 10.1128/mSphere.00531-19. Erratum in: mSphere. 2020 Feb 5;5(1):.

5.

Active nitrogen fixation by Crocosphaera expands their niche despite the presence of ammonium - A case study.

Inomura K, Masuda T, Gauglitz JM.

Sci Rep. 2019 Oct 21;9(1):15064. doi: 10.1038/s41598-019-51378-4.

6.

Untargeted mass spectrometry-based metabolomics approach unveils molecular changes in raw and processed foods and beverages.

Gauglitz JM, Aceves CM, Aksenov AA, Aleti G, Almaliti J, Bouslimani A, Brown EA, Campeau A, Caraballo-Rodríguez AM, Chaar R, da Silva RR, Demko AM, Di Ottavio F, Elijah E, Ernst M, Ferguson LP, Holmes X, Jarmusch AK, Jiang L, Kang KB, Koester I, Kwan B, Li J, Li Y, Melnik AV, Molina-Santiago C, Ni B, Oom AL, Panitchpakdi MW, Petras D, Quinn R, Sikora N, Spengler K, Teke B, Tripathi A, Ul-Hasan S, van der Hooft JJJ, Vargas F, Vrbanac A, Vu AQ, Wang SC, Weldon K, Wilson K, Wozniak JM, Yoon M, Bandeira N, Dorrestein PC.

Food Chem. 2020 Jan 1;302:125290. doi: 10.1016/j.foodchem.2019.125290. Epub 2019 Jul 30.

PMID:
31404873
7.

Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2.

Bolyen E, Rideout JR, Dillon MR, Bokulich NA, Abnet CC, Al-Ghalith GA, Alexander H, Alm EJ, Arumugam M, Asnicar F, Bai Y, Bisanz JE, Bittinger K, Brejnrod A, Brislawn CJ, Brown CT, Callahan BJ, Caraballo-Rodríguez AM, Chase J, Cope EK, Da Silva R, Diener C, Dorrestein PC, Douglas GM, Durall DM, Duvallet C, Edwardson CF, Ernst M, Estaki M, Fouquier J, Gauglitz JM, Gibbons SM, Gibson DL, Gonzalez A, Gorlick K, Guo J, Hillmann B, Holmes S, Holste H, Huttenhower C, Huttley GA, Janssen S, Jarmusch AK, Jiang L, Kaehler BD, Kang KB, Keefe CR, Keim P, Kelley ST, Knights D, Koester I, Kosciolek T, Kreps J, Langille MGI, Lee J, Ley R, Liu YX, Loftfield E, Lozupone C, Maher M, Marotz C, Martin BD, McDonald D, McIver LJ, Melnik AV, Metcalf JL, Morgan SC, Morton JT, Naimey AT, Navas-Molina JA, Nothias LF, Orchanian SB, Pearson T, Peoples SL, Petras D, Preuss ML, Pruesse E, Rasmussen LB, Rivers A, Robeson MS 2nd, Rosenthal P, Segata N, Shaffer M, Shiffer A, Sinha R, Song SJ, Spear JR, Swafford AD, Thompson LR, Torres PJ, Trinh P, Tripathi A, Turnbaugh PJ, Ul-Hasan S, van der Hooft JJJ, Vargas F, Vázquez-Baeza Y, Vogtmann E, von Hippel M, Walters W, Wan Y, Wang M, Warren J, Weber KC, Williamson CHD, Willis AD, Xu ZZ, Zaneveld JR, Zhang Y, Zhu Q, Knight R, Caporaso JG.

Nat Biotechnol. 2019 Sep;37(9):1091. doi: 10.1038/s41587-019-0252-6.

PMID:
31399723
8.

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2.

Bolyen E, Rideout JR, Dillon MR, Bokulich NA, Abnet CC, Al-Ghalith GA, Alexander H, Alm EJ, Arumugam M, Asnicar F, Bai Y, Bisanz JE, Bittinger K, Brejnrod A, Brislawn CJ, Brown CT, Callahan BJ, Caraballo-Rodríguez AM, Chase J, Cope EK, Da Silva R, Diener C, Dorrestein PC, Douglas GM, Durall DM, Duvallet C, Edwardson CF, Ernst M, Estaki M, Fouquier J, Gauglitz JM, Gibbons SM, Gibson DL, Gonzalez A, Gorlick K, Guo J, Hillmann B, Holmes S, Holste H, Huttenhower C, Huttley GA, Janssen S, Jarmusch AK, Jiang L, Kaehler BD, Kang KB, Keefe CR, Keim P, Kelley ST, Knights D, Koester I, Kosciolek T, Kreps J, Langille MGI, Lee J, Ley R, Liu YX, Loftfield E, Lozupone C, Maher M, Marotz C, Martin BD, McDonald D, McIver LJ, Melnik AV, Metcalf JL, Morgan SC, Morton JT, Naimey AT, Navas-Molina JA, Nothias LF, Orchanian SB, Pearson T, Peoples SL, Petras D, Preuss ML, Pruesse E, Rasmussen LB, Rivers A, Robeson MS 2nd, Rosenthal P, Segata N, Shaffer M, Shiffer A, Sinha R, Song SJ, Spear JR, Swafford AD, Thompson LR, Torres PJ, Trinh P, Tripathi A, Turnbaugh PJ, Ul-Hasan S, van der Hooft JJJ, Vargas F, Vázquez-Baeza Y, Vogtmann E, von Hippel M, Walters W, Wan Y, Wang M, Warren J, Weber KC, Williamson CHD, Willis AD, Xu ZZ, Zaneveld JR, Zhang Y, Zhu Q, Knight R, Caporaso JG.

Nat Biotechnol. 2019 Aug;37(8):852-857. doi: 10.1038/s41587-019-0209-9. No abstract available. Erratum in: Nat Biotechnol. 2019 Sep;37(9):1091.

9.

Alternative Ready-To-Use Therapeutic Food Yields Less Recovery Than the Standard for Treating Acute Malnutrition in Children From Ghana.

Kohlmann K, Callaghan-Gillespie M, Gauglitz JM, Steiner-Asiedu M, Saalia K, Edwards C, Manary MJ.

Glob Health Sci Pract. 2019 Jun 27;7(2):203-214. doi: 10.9745/GHSP-D-19-00004. Print 2019 Jun.

10.

Publisher Correction: Pelagic barite precipitation at micromolar ambient sulfate.

Horner TJ, Pryer HV, Nielsen SG, Crockford PW, Gauglitz JM, Wing BA, Ricketts RD.

Nat Commun. 2018 Jan 16;9(1):305. doi: 10.1038/s41467-017-02701-y.

11.

Pelagic barite precipitation at micromolar ambient sulfate.

Horner TJ, Pryer HV, Nielsen SG, Crockford PW, Gauglitz JM, Wing BA, Ricketts RD.

Nat Commun. 2017 Nov 7;8(1):1342. doi: 10.1038/s41467-017-01229-5. Erratum in: Nat Commun. 2018 Jan 16;9(1):305.

12.

Microbial tailoring of acyl peptidic siderophores.

Gauglitz JM, Iinishi A, Ito Y, Butler A.

Biochemistry. 2014 Apr 29;53(16):2624-31. doi: 10.1021/bi500266x. Epub 2014 Apr 15.

13.

Amphiphilic siderophore production by oil-associating microbes.

Kem MP, Zane HK, Springer SD, Gauglitz JM, Butler A.

Metallomics. 2014 Jun;6(6):1150-5. doi: 10.1039/c4mt00047a.

14.

Amino acid variability in the peptide composition of a suite of amphiphilic peptide siderophores from an open ocean Vibrio species.

Gauglitz JM, Butler A.

J Biol Inorg Chem. 2013 Jun;18(5):489-97. doi: 10.1007/s00775-013-0995-3. Epub 2013 Apr 6.

15.

A suite of citrate-derived siderophores from a marine Vibrio species isolated following the Deepwater Horizon oil spill.

Gauglitz JM, Zhou H, Butler A.

J Inorg Biochem. 2012 Feb;107(1):90-5. doi: 10.1016/j.jinorgbio.2011.10.013. Epub 2011 Nov 3.

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