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Items: 1 to 50 of 191

1.

Remembering John Herbert Beynon 29th December 1923 to 24th August 2015.

Boyd B, Brenton G, Clayton E, Curtis J, Elliott RM, Errock GA, Green BN, Bateman RH, Gaskell SJ, Griffiths I, Herman Z, Jonathan P, Kondrat R, Laušević M, Lock C, Mathur D, Todd JF, Vékey K.

J Mass Spectrom. 2016 Jun;51(6):385-95. doi: 10.1002/jms.3752. No abstract available.

PMID:
27270862
2.

Remembering John Herbert Beynon 29th December 1923 to 24th August 2015.

Boyd B, Brenton G, Clayton E, Curtis J, Elliott RM, Errock GA, Green BN, Bateman RH, Gaskell SJ, Griffiths I, Herman Z, Jonathan P, Kondrat R, Laušević M, Lock C, Mathur D, Todd JF, Vékey K.

Rapid Commun Mass Spectrom. 2016 Jun 15;30(11):1253-64. doi: 10.1002/rcm.7520. No abstract available.

PMID:
27173107
3.

Peptide scrambling during collision-induced dissociation is influenced by N-terminal residue basicity.

Chawner R, Holman SW, Gaskell SJ, Eyers CE.

J Am Soc Mass Spectrom. 2014 Nov;25(11):1927-38. doi: 10.1007/s13361-014-0968-y. Epub 2014 Aug 19.

4.

Quantification of the proteins of the bacterial ribosome using QconCAT technology.

Al-Majdoub ZM, Carroll KM, Gaskell SJ, Barber J.

J Proteome Res. 2014 Mar 7;13(3):1211-22. doi: 10.1021/pr400667h. Epub 2014 Feb 12.

PMID:
24494973
5.

A model of yeast glycolysis based on a consistent kinetic characterisation of all its enzymes.

Smallbone K, Messiha HL, Carroll KM, Winder CL, Malys N, Dunn WB, Murabito E, Swainston N, Dada JO, Khan F, Pir P, Simeonidis E, Spasić I, Wishart J, Weichart D, Hayes NW, Jameson D, Broomhead DS, Oliver SG, Gaskell SJ, McCarthy JE, Paton NW, Westerhoff HV, Kell DB, Mendes P.

FEBS Lett. 2013 Sep 2;587(17):2832-41. doi: 10.1016/j.febslet.2013.06.043. Epub 2013 Jul 4.

6.

Partition and turnover of glutathione reductase from Saccharomyces cerevisiae: a proteomic approach.

Couto N, Malys N, Gaskell SJ, Barber J.

J Proteome Res. 2013 Jun 7;12(6):2885-94. doi: 10.1021/pr4001948. Epub 2013 May 10.

PMID:
23631642
7.

Effects of gentamicin on the proteomes of aerobic and oxygen-limited Escherichia coli.

Al-Majdoub ZM, Owoseni A, Gaskell SJ, Barber J.

J Med Chem. 2013 Apr 11;56(7):2904-10. doi: 10.1021/jm301858u. Epub 2013 Mar 29.

PMID:
23517076
8.

QconCAT standard for calibration of ion mobility-mass spectrometry systems.

Chawner R, McCullough B, Giles K, Barran PE, Gaskell SJ, Eyers CE.

J Proteome Res. 2012 Nov 2;11(11):5564-72. doi: 10.1021/pr3005327. Epub 2012 Oct 9.

PMID:
22985290
9.

Detection of low-abundance protein phosphorylation by selective 18O labeling and mass spectrometry.

Alghamdi WM, Gaskell SJ, Barber J.

Anal Chem. 2012 Sep 4;84(17):7384-92. doi: 10.1021/ac301038u. Epub 2012 Aug 17.

PMID:
22876816
10.

Software for analysing ion mobility mass spectrometry data to improve peptide identification.

Xia D, Ghali F, Gaskell SJ, O'Cualain R, Sims PF, Jones AR.

Proteomics. 2012 Jun;12(12):1912-6. doi: 10.1002/pmic.201200029.

PMID:
22623287
11.

Matrix-assisted laser desorption/ionisation mass spectrometric response factors of peptides generated using different proteolytic enzymes.

Couto N, Barber J, Gaskell SJ.

J Mass Spectrom. 2011 Dec;46(12):1233-40. doi: 10.1002/jms.2009.

PMID:
22223413
12.

Charge state dependent top-down characterisation using electron transfer dissociation.

Rožman M, Gaskell SJ.

Rapid Commun Mass Spectrom. 2012 Feb 15;26(3):282-6. doi: 10.1002/rcm.5330.

PMID:
22223314
13.

Proposal for a common nomenclature for peptide fragment ions generated following sequence scrambling during collision-induced dissociation.

Chawner R, Gaskell SJ, Eyers CE.

Rapid Commun Mass Spectrom. 2012 Jan 30;26(2):205-6. doi: 10.1002/rcm.5294. No abstract available.

PMID:
22173809
14.

Absolute quantification of the glycolytic pathway in yeast: deployment of a complete QconCAT approach.

Carroll KM, Simpson DM, Eyers CE, Knight CG, Brownridge P, Dunn WB, Winder CL, Lanthaler K, Pir P, Malys N, Kell DB, Oliver SG, Gaskell SJ, Beynon RJ.

Mol Cell Proteomics. 2011 Dec;10(12):M111.007633. doi: 10.1074/mcp.M111.007633. Epub 2011 Sep 19.

15.

CONSeQuence: prediction of reference peptides for absolute quantitative proteomics using consensus machine learning approaches.

Eyers CE, Lawless C, Wedge DC, Lau KW, Gaskell SJ, Hubbard SJ.

Mol Cell Proteomics. 2011 Nov;10(11):M110.003384. doi: 10.1074/mcp.M110.003384. Epub 2011 Aug 3.

16.

Global absolute quantification of a proteome: Challenges in the deployment of a QconCAT strategy.

Brownridge P, Holman SW, Gaskell SJ, Grant CM, Harman VM, Hubbard SJ, Lanthaler K, Lawless C, O'Cualain R, Sims P, Watkins R, Beynon RJ.

Proteomics. 2011 Aug;11(15):2957-70. doi: 10.1002/pmic.201100039. Epub 2011 Jun 28. Review.

PMID:
21710569
17.

Identification of a lacosamide binding protein using an affinity bait and chemical reporter strategy: 14-3-3 ζ.

Park KD, Kim D, Reamtong O, Eyers C, Gaskell SJ, Liu R, Kohn H.

J Am Chem Soc. 2011 Jul 27;133(29):11320-30. doi: 10.1021/ja2034156. Epub 2011 Jul 6.

18.

New applications of mass spectrometry in lipid analysis.

Murphy RC, Gaskell SJ.

J Biol Chem. 2011 Jul 22;286(29):25427-33. doi: 10.1074/jbc.R111.233478. Epub 2011 Jun 1. Review.

19.

Proton transfer reactions for improved peptide characterisation.

Rožman M, Schneider A, Gaskell SJ.

J Mass Spectrom. 2011 Jun;46(6):529-34. doi: 10.1002/jms.1920.

PMID:
21630380
20.

Systematic integration of experimental data and models in systems biology.

Li P, Dada JO, Jameson D, Spasic I, Swainston N, Carroll K, Dunn W, Khan F, Malys N, Messiha HL, Simeonidis E, Weichart D, Winder C, Wishart J, Broomhead DS, Goble CA, Gaskell SJ, Kell DB, Westerhoff HV, Mendes P, Paton NW.

BMC Bioinformatics. 2010 Nov 29;11:582. doi: 10.1186/1471-2105-11-582.

21.

Distributions of ion series in ETD and CID spectra: making a comparison.

Hart SR, Lau KW, Gaskell SJ, Hubbard SJ.

Methods Mol Biol. 2011;696:327-37. doi: 10.1007/978-1-60761-987-1_21.

PMID:
21063958
22.

Non-covalent interactions of alkali metal cations with singly charged tryptic peptides.

Rožman M, Gaskell SJ.

J Mass Spectrom. 2010 Dec;45(12):1409-15. doi: 10.1002/jms.1856.

PMID:
21031360
23.

A gel-free quantitative proteomics analysis of factors released from hypoxic-conditioned placentae.

Blankley RT, Robinson NJ, Aplin JD, Crocker IP, Gaskell SJ, Whetton AD, Baker PN, Myers JE.

Reprod Sci. 2010 Mar;17(3):247-57. doi: 10.1177/1933719109351320. Epub 2009 Nov 11.

PMID:
19907055
24.

Lacosamide isothiocyanate-based agents: novel agents to target and identify lacosamide receptors.

Park KD, Morieux P, Salomé C, Cotten SW, Reamtong O, Eyers C, Gaskell SJ, Stables JP, Liu R, Kohn H.

J Med Chem. 2009 Nov 12;52(21):6897-911. doi: 10.1021/jm9012054.

25.

Rigorous determination of the stoichiometry of protein phosphorylation using mass spectrometry.

Johnson H, Eyers CE, Eyers PA, Beynon RJ, Gaskell SJ.

J Am Soc Mass Spectrom. 2009 Dec;20(12):2211-20. doi: 10.1016/j.jasms.2009.08.009. Epub 2009 Aug 27.

26.

A proof-of-principle gel-free proteomics strategy for the identification of predictive biomarkers for the onset of pre-eclampsia.

Blankley RT, Gaskell SJ, Whetton AD, Dive C, Baker PN, Myers JE.

BJOG. 2009 Oct;116(11):1473-80. doi: 10.1111/j.1471-0528.2009.02283.x. Epub 2009 Aug 4.

27.

Observations on the detection of b- and y-type ions in the collisionally activated decomposition spectra of protonated peptides.

Lau KW, Hart SR, Lynch JA, Wong SC, Hubbard SJ, Gaskell SJ.

Rapid Commun Mass Spectrom. 2009 May;23(10):1508-14. doi: 10.1002/rcm.4032.

PMID:
19370712
28.

Digital ion trap mass spectrometer for probing the structure of biological macromolecules by gas phase X-ray scattering.

McCullough BJ, Entwistle A, Konishi I, Buffey S, Hasnain SS, Brancia FL, Grossmann JG, Gaskell SJ.

Anal Chem. 2009 May 1;81(9):3392-7. doi: 10.1021/ac802662d.

PMID:
19354287
29.

Using electrospray ionisation mass spectrometry to study non-covalent interactions.

McCullough BJ, Gaskell SJ.

Comb Chem High Throughput Screen. 2009 Feb;12(2):203-11. Review.

PMID:
19199888
30.

Exploiting proteomic data for genome annotation and gene model validation in Aspergillus niger.

Wright JC, Sugden D, Francis-McIntyre S, Riba-Garcia I, Gaskell SJ, Grigoriev IV, Baker SE, Beynon RJ, Hubbard SJ.

BMC Genomics. 2009 Feb 4;10:61. doi: 10.1186/1471-2164-10-61.

31.

Turnover of the human proteome: determination of protein intracellular stability by dynamic SILAC.

Doherty MK, Hammond DE, Clague MJ, Gaskell SJ, Beynon RJ.

J Proteome Res. 2009 Jan;8(1):104-12. doi: 10.1021/pr800641v.

PMID:
18954100
32.

Analysis of the trypanosome flagellar proteome using a combined electron transfer/collisionally activated dissociation strategy.

Hart SR, Lau KW, Hao Z, Broadhead R, Portman N, Hühmer A, Gull K, McKean PG, Hubbard SJ, Gaskell SJ.

J Am Soc Mass Spectrom. 2009 Feb;20(2):167-75. doi: 10.1016/j.jasms.2008.08.014. Epub 2008 Sep 3.

33.

Studies of peptide a- and b-type fragment ions using stable isotope labeling and integrated ion mobility/tandem mass spectrometry.

Riba Garcia I, Giles K, Bateman RH, Gaskell SJ.

J Am Soc Mass Spectrom. 2008 Dec;19(12):1781-7. doi: 10.1016/j.jasms.2008.09.024. Epub 2008 Sep 30.

34.

SPOT synthesis of peptide arrays on self-assembled monolayers and their evaluation as enzyme substrates.

Laurent N, Haddoub R, Voglmeir J, Wong SC, Gaskell SJ, Flitsch SL.

Chembiochem. 2008 Nov 3;9(16):2592-6. doi: 10.1002/cbic.200800481. No abstract available.

PMID:
18821537
35.

Methods of proteome analysis: challenges and opportunities.

Hart SR, Gaskell SJ.

SEB Exp Biol Ser. 2008;61:37-64. Review. No abstract available.

PMID:
18709736
36.

Phosphoregulation of human Mps1 kinase.

Tyler RK, Chu ML, Johnson H, McKenzie EA, Gaskell SJ, Eyers PA.

Biochem J. 2009 Jan 1;417(1):173-81. doi: 10.1042/BJ20081310.

PMID:
18680479
37.

Genome-wide analysis of the effects of heat shock on a Saccharomyces cerevisiae mutant with a constitutively activated cAMP-dependent pathway.

Jones DL, Petty J, Hoyle DC, Hayes A, Oliver SG, Riba-Garcia I, Gaskell SJ, Stateva L.

Comp Funct Genomics. 2004;5(5):419-31. doi: 10.1002/cfg.415.

38.

QCAL--a novel standard for assessing instrument conditions for proteome analysis.

Eyers CE, Simpson DM, Wong SC, Beynon RJ, Gaskell SJ.

J Am Soc Mass Spectrom. 2008 Sep;19(9):1275-80. doi: 10.1016/j.jasms.2008.05.019. Epub 2008 Jul 2.

39.

Protein quantification by selective isolation and fragmentation of isotopic pairs using FT-ICR MS.

Johnson H, Wong SC, Simpson DM, Beynon RJ, Gaskell SJ.

J Am Soc Mass Spectrom. 2008 Jul;19(7):973-7. doi: 10.1016/j.jasms.2008.03.012. Epub 2008 Apr 8.

40.

Enzymatic glycosylation of peptide arrays on gold surfaces.

Laurent N, Voglmeir J, Wright A, Blackburn J, Pham NT, Wong SC, Gaskell SJ, Flitsch SL.

Chembiochem. 2008 Apr 14;9(6):883-7. doi: 10.1002/cbic.200700692. No abstract available.

41.

Evidence for structural variants of a- and b-type peptide fragment ions using combined ion mobility/mass spectrometry.

Riba-Garcia I, Giles K, Bateman RH, Gaskell SJ.

J Am Soc Mass Spectrom. 2008 Apr;19(4):609-13. doi: 10.1016/j.jasms.2008.01.005. Epub 2008 Jan 31.

42.

Observation of heterogeneous gene products by FT-ICR MS.

Robertson DH, Wong SC, Beynon RJ, Hurst JL, Gaskell SJ.

J Am Soc Mass Spectrom. 2008 Jan;19(1):103-10. doi: 10.1016/j.jasms.2007.10.011.

PMID:
18293489
43.

Absolute multiplexed quantitative analysis of protein expression during muscle development using QconCAT.

Rivers J, Simpson DM, Robertson DH, Gaskell SJ, Beynon RJ.

Mol Cell Proteomics. 2007 Aug;6(8):1416-27. Epub 2007 May 17.

44.

Growth control of the eukaryote cell: a systems biology study in yeast.

Castrillo JI, Zeef LA, Hoyle DC, Zhang N, Hayes A, Gardner DC, Cornell MJ, Petty J, Hakes L, Wardleworth L, Rash B, Brown M, Dunn WB, Broadhurst D, O'Donoghue K, Hester SS, Dunkley TP, Hart SR, Swainston N, Li P, Gaskell SJ, Paton NW, Lilley KS, Kell DB, Oliver SG.

J Biol. 2007;6(2):4. doi: 10.1186/jbiol54.

45.

Multiplexed absolute quantification for proteomics using concatenated signature peptides encoded by QconCAT genes.

Pratt JM, Simpson DM, Doherty MK, Rivers J, Gaskell SJ, Beynon RJ.

Nat Protoc. 2006;1(2):1029-43.

PMID:
17406340
46.

Evidence for multiple circulating factors in preeclampsia.

Myers JE, Hart S, Armstrong S, Mires GJ, Beynon R, Gaskell SJ, Baker PN.

Am J Obstet Gynecol. 2007 Mar;196(3):266.e1-6.

PMID:
17346549
47.

Proteomics gets faster and smarter.

Johnson H, Gaskell SJ.

Genome Biol. 2006;7(11):331. No abstract available.

48.

Guanidination chemistry for qualitative and quantitative proteomics.

Warwood S, Mohammed S, Cristea IM, Evans C, Whetton AD, Gaskell SJ.

Rapid Commun Mass Spectrom. 2006;20(21):3245-56.

PMID:
17019669
49.

Identification of early proteomic markers for hepatic steatosis.

Meneses-Lorente G, Watt A, Salim K, Gaskell SJ, Muniappa N, Lawrence J, Guest PC.

Chem Res Toxicol. 2006 Aug;19(8):986-98.

PMID:
16918237
50.

Flagellar motility is required for the viability of the bloodstream trypanosome.

Broadhead R, Dawe HR, Farr H, Griffiths S, Hart SR, Portman N, Shaw MK, Ginger ML, Gaskell SJ, McKean PG, Gull K.

Nature. 2006 Mar 9;440(7081):224-7.

PMID:
16525475

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