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Items: 44

1.

Binding, sliding, and function of cohesin during transcriptional activation.

Borrie MS, Campor JS, Joshi H, Gartenberg MR.

Proc Natl Acad Sci U S A. 2017 Feb 14;114(7):E1062-E1071. doi: 10.1073/pnas.1617309114. Epub 2017 Jan 30.

2.

The Nuts and Bolts of Transcriptionally Silent Chromatin in Saccharomyces cerevisiae.

Gartenberg MR, Smith JS.

Genetics. 2016 Aug;203(4):1563-99. doi: 10.1534/genetics.112.145243. Review.

3.

Determinants of Sir2-Mediated, Silent Chromatin Cohesion.

Chen YF, Chou CC, Gartenberg MR.

Mol Cell Biol. 2016 Jul 14;36(15):2039-50. doi: 10.1128/MCB.00057-16. Print 2016 Aug 1.

4.

A series of conditional shuttle vectors for targeted genomic integration in budding yeast.

Chou CC, Patel MT, Gartenberg MR.

FEMS Yeast Res. 2015 May;15(3). pii: fov010. doi: 10.1093/femsyr/fov010. Epub 2015 Mar 2.

5.

Silencing sounds off.

Chen YF, Gartenberg MR.

Elife. 2015 Mar 2;4. doi: 10.7554/eLife.06717.

6.

Coordination of tRNA transcription with export at nuclear pore complexes in budding yeast.

Chen M, Gartenberg MR.

Genes Dev. 2014 May 1;28(9):959-70. doi: 10.1101/gad.236729.113.

7.

Palmitoylation in the nucleus: a little fat around the edges.

Fox CA, Gartenberg MR.

Nucleus. 2012 May-Jun;3(3):251-5. doi: 10.4161/nucl.20391. Epub 2012 May 1.

8.

Generation of DNA circles in yeast by inducible site-specific recombination.

Gartenberg MR.

Methods Mol Biol. 2012;833:103-13. doi: 10.1007/978-1-61779-477-3_7.

PMID:
22183590
9.

Palmitoylation controls the dynamics of budding-yeast heterochromatin via the telomere-binding protein Rif1.

Park S, Patterson EE, Cobb J, Audhya A, Gartenberg MR, Fox CA.

Proc Natl Acad Sci U S A. 2011 Aug 30;108(35):14572-7. doi: 10.1073/pnas.1105262108. Epub 2011 Aug 15.

10.

Nucleoporin mediated nuclear positioning and silencing of HMR.

Ruben GJ, Kirkland JG, MacDonough T, Chen M, Dubey RN, Gartenberg MR, Kamakaka RT.

PLoS One. 2011;6(7):e21923. doi: 10.1371/journal.pone.0021923. Epub 2011 Jul 19.

11.

Targeted sister chromatid cohesion by Sir2.

Wu CS, Chen YF, Gartenberg MR.

PLoS Genet. 2011 Feb 3;7(2):e1002000. doi: 10.1371/journal.pgen.1002000.

12.

Life on the edge: telomeres and persistent DNA breaks converge at the nuclear periphery.

Gartenberg MR.

Genes Dev. 2009 May 1;23(9):1027-31. doi: 10.1101/gad.1805309.

13.

Condensin goes with the family but not with the flow.

Gartenberg MR, Merkenschlager M.

Genome Biol. 2008 Oct 6;9(10):236. doi: 10.1186/gb-2008-9-10-236. Review.

14.

Bypassing Sir2 and O-acetyl-ADP-ribose in transcriptional silencing.

Chou CC, Li YC, Gartenberg MR.

Mol Cell. 2008 Sep 5;31(5):650-9. doi: 10.1016/j.molcel.2008.06.020.

15.

Long-range communication between the silencers of HMR.

Valenzuela L, Dhillon N, Dubey RN, Gartenberg MR, Kamakaka RT.

Mol Cell Biol. 2008 Mar;28(6):1924-35. doi: 10.1128/MCB.01647-07. Epub 2008 Jan 14.

16.

Controlled exchange of chromosomal arms reveals principles driving telomere interactions in yeast.

Schober H, Kalck V, Vega-Palas MA, Van Houwe G, Sage D, Unser M, Gartenberg MR, Gasser SM.

Genome Res. 2008 Feb;18(2):261-71. Epub 2007 Dec 20.

17.

A tDNA establishes cohesion of a neighboring silent chromatin domain.

Dubey RN, Gartenberg MR.

Genes Dev. 2007 Sep 1;21(17):2150-60.

18.

Swapping the gene-specific and regional silencing specificities of the Hst1 and Sir2 histone deacetylases.

Mead J, McCord R, Youngster L, Sharma M, Gartenberg MR, Vershon AK.

Mol Cell Biol. 2007 Apr;27(7):2466-75. Epub 2007 Jan 22.

19.

Targeting of cohesin by transcriptionally silent chromatin.

Chang CR, Wu CS, Hom Y, Gartenberg MR.

Genes Dev. 2005 Dec 15;19(24):3031-42. Epub 2005 Nov 30.

20.

The function of telomere clustering in yeast: the circe effect.

Gasser SM, Hediger F, Taddei A, Neumann FR, Gartenberg MR.

Cold Spring Harb Symp Quant Biol. 2004;69:327-37. Review. No abstract available.

PMID:
16117665
21.

Multiple pathways tether telomeres and silent chromatin at the nuclear periphery: functional implications for sir-mediated repression.

Taddei A, Gartenberg MR, Neumann FR, Hediger F, Gasser SM.

Novartis Found Symp. 2005;264:140-56; discussion 156-65, 227-30. Review.

PMID:
15773752
22.

Sir-mediated repression can occur independently of chromosomal and subnuclear contexts.

Gartenberg MR, Neumann FR, Laroche T, Blaszczyk M, Gasser SM.

Cell. 2004 Dec 29;119(7):955-67.

23.

Formation of extrachromosomal DNA rings in Saccharomyces cerevisiae using site-specific recombination.

Gartenberg MR.

Methods Mol Biol. 1999;94:125-33. No abstract available.

PMID:
12844868
24.

Esc1, a nuclear periphery protein required for Sir4-based plasmid anchoring and partitioning.

Andrulis ED, Zappulla DC, Ansari A, Perrod S, Laiosa CV, Gartenberg MR, Sternglanz R.

Mol Cell Biol. 2002 Dec;22(23):8292-301.

25.

Establishment of transcriptional silencing in the absence of DNA replication.

Li YC, Cheng TH, Gartenberg MR.

Science. 2001 Jan 26;291(5504):650-3.

26.

Role for nucleolin/Nsr1 in the cellular localization of topoisomerase I.

Edwards TK, Saleem A, Shaman JA, Dennis T, Gerigk C, Oliveros E, Gartenberg MR, Rubin EH.

J Biol Chem. 2000 Nov 17;275(46):36181-8.

27.

The Sir proteins of Saccharomyces cerevisiae: mediators of transcriptional silencing and much more.

Gartenberg MR.

Curr Opin Microbiol. 2000 Apr;3(2):132-7. Review.

PMID:
10744999
28.

Yeast heterochromatin is a dynamic structure that requires silencers continuously.

Cheng TH, Gartenberg MR.

Genes Dev. 2000 Feb 15;14(4):452-63.

29.

Controlling gene expression in yeast by inducible site-specific recombination.

Cheng TH, Chang CR, Joy P, Yablok S, Gartenberg MR.

Nucleic Acids Res. 2000 Dec 15;28(24):E108.

30.

Isolation of selected chromatin fragments from yeast by site-specific recombination in vivo.

Ansari A, Cheng TH, Gartenberg MR.

Methods. 1999 Feb;17(2):104-11.

PMID:
10075889
31.

Persistence of an alternate chromatin structure at silenced loci in vitro.

Ansari A, Gartenberg MR.

Proc Natl Acad Sci U S A. 1999 Jan 19;96(2):343-8.

32.

Curing Saccharomyces cerevisiae of the 2 micron plasmid by targeted DNA damage.

Tsalik EL, Gartenberg MR.

Yeast. 1998 Jun 30;14(9):847-52.

33.

Persistence of an alternate chromatin structure at silenced loci in the absence of silencers.

Cheng TH, Li YC, Gartenberg MR.

Proc Natl Acad Sci U S A. 1998 May 12;95(10):5521-6.

34.

The yeast silent information regulator Sir4p anchors and partitions plasmids.

Ansari A, Gartenberg MR.

Mol Cell Biol. 1997 Dec;17(12):7061-8.

35.

Yeast telomeric sequences function as chromosomal anchorage points in vivo.

Mirabella A, Gartenberg MR.

EMBO J. 1997 Feb 3;16(3):523-33.

37.

Positive supercoiling of DNA greatly diminishes mRNA synthesis in yeast.

Gartenberg MR, Wang JC.

Proc Natl Acad Sci U S A. 1992 Dec 1;89(23):11461-5.

38.

A hit-and-run system for targeted genetic manipulations in yeast.

Roca J, Gartenberg MR, Oshima Y, Wang JC.

Nucleic Acids Res. 1992 Sep 11;20(17):4671-2. No abstract available.

39.
40.

Sequence-dependent contribution of distal binding domains to CAP protein-DNA binding affinity.

Dalma-Weiszhausz DD, Gartenberg MR, Crothers DM.

Nucleic Acids Res. 1991 Feb 11;19(3):611-6.

41.

DNA bending in protein-DNA complexes.

Crothers DM, Gartenberg MR, Shrader TE.

Methods Enzymol. 1991;208:118-46. No abstract available.

PMID:
1779833
42.

Molecular characterization of the GCN4-DNA complex.

Gartenberg MR, Ampe C, Steitz TA, Crothers DM.

Proc Natl Acad Sci U S A. 1990 Aug;87(16):6034-8.

43.

DNA sequence determinants of CAP-induced bending and protein binding affinity.

Gartenberg MR, Crothers DM.

Nature. 1988 Jun 30;333(6176):824-9.

PMID:
2838756
44.

The DNA binding domain and bending angle of E. coli CAP protein.

Liu-Johnson HN, Gartenberg MR, Crothers DM.

Cell. 1986 Dec 26;47(6):995-1005.

PMID:
3536129

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