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Time-dependent Pax3-mediated chromatin remodeling and cooperation with Six4 and Tead2 specify the skeletal myogenic lineage in developing mesoderm.

Magli A, Baik J, Mills LJ, Kwak IY, Dillon BS, Mondragon Gonzalez R, Stafford DA, Swanson SA, Stewart R, Thomson JA, Garry DJ, Dynlacht BD, Perlingeiro RCR.

PLoS Biol. 2019 Feb 26;17(2):e3000153. doi: 10.1371/journal.pbio.3000153. eCollection 2019 Feb.


Convergences of Life Sciences and Engineering in Understanding and Treating Heart Failure.

Berry JL, Zhu W, Tang YL, Krishnamurthy P, Ge Y, Cooke JP, Chen Y, Garry DJ, Yang HT, Rajasekaran NS, Koch WJ, Li S, Domae K, Qin G, Cheng K, Kamp TJ, Ye L, Hu S, Ogle BM, Rogers JM, Abel ED, Davis ME, Prabhu SD, Liao R, Pu WT, Wang Y, Ping P, Bursac N, Vunjak-Novakovic G, Wu JC, Bolli R, Menasché P, Zhang J.

Circ Res. 2019 Jan 4;124(1):161-169. doi: 10.1161/CIRCRESAHA.118.314216.


Interspecies Chimeras and the Generation of Humanized Organs.

Garry DJ, Garry MG.

Circ Res. 2019 Jan 4;124(1):23-25. doi: 10.1161/CIRCRESAHA.118.314189. No abstract available.


Progesterone effects on vaginal cytokines in women with a history of preterm birth.

Garry DJ, Baker DA, Persad MD, Peresleni T, Kocis C, Demishev M.

PLoS One. 2018 Dec 31;13(12):e0209346. doi: 10.1371/journal.pone.0209346. eCollection 2018.


Loss of peroxiredoxin-2 exacerbates eccentric contraction-induced force loss in dystrophin-deficient muscle.

Olthoff JT, Lindsay A, Abo-Zahrah R, Baltgalvis KA, Patrinostro X, Belanto JJ, Yu DY, Perrin BJ, Garry DJ, Rodney GG, Lowe DA, Ervasti JM.

Nat Commun. 2018 Nov 30;9(1):5104. doi: 10.1038/s41467-018-07639-3.


A conserved HH-Gli1-Mycn network regulates heart regeneration from newt to human.

Singh BN, Koyano-Nakagawa N, Gong W, Moskowitz IP, Weaver CV, Braunlin E, Das S, van Berlo JH, Garry MG, Garry DJ.

Nat Commun. 2018 Oct 12;9(1):4237. doi: 10.1038/s41467-018-06617-z.


Integrative effects of dystrophin loss on metabolic function of the mdx mouse.

Strakova J, Kamdar F, Kulhanek D, Razzoli M, Garry DJ, Ervasti JM, Bartolomucci A, Townsend D.

Sci Rep. 2018 Sep 11;8(1):13624. doi: 10.1038/s41598-018-31753-3.


Predicting Evolution of the Transcription Regulatory Network in a Bacteriophage.

Garry DJ, Meyer AJ, Ellefson JW, Bull JJ, Ellington AD.

Genome Biol Evol. 2018 Oct 1;10(10):2614-2628. doi: 10.1093/gbe/evy191.


TCM visualizes trajectories and cell populations from single cell data.

Gong W, Kwak IY, Koyano-Nakagawa N, Pan W, Garry DJ.

Nat Commun. 2018 Jul 16;9(1):2749. doi: 10.1038/s41467-018-05112-9.


Hedgehog and Wnt Signaling Pathways Regulate Tail Regeneration.

Singh BN, Weaver CV, Garry MG, Garry DJ.

Stem Cells Dev. 2018 Oct 15;27(20):1426-1437. doi: 10.1089/scd.2018.0049. Epub 2018 Sep 8.


Viral attenuation by engineered protein fragmentation.

Garry DJ, Ellington AD, Molineux IJ, Bull JJ.

Virus Evol. 2018 Jun 19;4(1):vey017. doi: 10.1093/ve/vey017. eCollection 2018 Jan.


DrImpute: imputing dropout events in single cell RNA sequencing data.

Gong W, Kwak IY, Pota P, Koyano-Nakagawa N, Garry DJ.

BMC Bioinformatics. 2018 Jun 8;19(1):220. doi: 10.1186/s12859-018-2226-y.


Evolution of a Thermophilic Strand-Displacing Polymerase Using High-Temperature Isothermal Compartmentalized Self-Replication.

Milligan JN, Shroff R, Garry DJ, Ellington AD.

Biochemistry. 2018 Aug 7;57(31):4607-4619. doi: 10.1021/acs.biochem.8b00200. Epub 2018 Apr 18.


Etv2-miR-130a-Jarid2 cascade regulates vascular patterning during embryogenesis.

Singh BN, Tahara N, Kawakami Y, Das S, Koyano-Nakagawa N, Gong W, Garry MG, Garry DJ.

PLoS One. 2017 Dec 12;12(12):e0189010. doi: 10.1371/journal.pone.0189010. eCollection 2017.


Gata6 restricts Isl1 to the posterior of nascent hindlimb buds through Isl1 cis-regulatory modules.

Tahara N, Akiyama R, Theisen JWM, Kawakami H, Wong J, Garry DJ, Kawakami Y.

Dev Biol. 2018 Feb 1;434(1):74-83. doi: 10.1016/j.ydbio.2017.11.013. Epub 2017 Dec 7.


In Reply.

Buresch AM, Van Arsdale A, Garry DJ.

Obstet Gynecol. 2017 Dec;130(6):1387-1388. doi: 10.1097/AOG.0000000000002387. No abstract available.


Pathologic Stimulus Determines Lineage Commitment of Cardiac C-kit+ Cells.

Chen Z, Zhu W, Bender I, Gong W, Kwak IY, Yellamilli A, Hodges TJ, Nemoto N, Zhang J, Garry DJ, van Berlo JH.

Circulation. 2017 Dec 12;136(24):2359-2372. doi: 10.1161/CIRCULATIONAHA.117.030137. Epub 2017 Oct 11.


Etv2 as an essential regulator of mesodermal lineage development.

Koyano-Nakagawa N, Garry DJ.

Cardiovasc Res. 2017 Sep 1;113(11):1294-1306. doi: 10.1093/cvr/cvx133. Review.


Comparison of Subcuticular Suture Type for Skin Closure After Cesarean Delivery: A Randomized Controlled Trial.

Buresch AM, Van Arsdale A, Ferzli M, Sahasrabudhe N, Sun M, Bernstein J, Bernstein PS, Ngai IM, Garry DJ.

Obstet Gynecol. 2017 Sep;130(3):521-526. doi: 10.1097/AOG.0000000000002200.


Overcoming the Roadblocks to Cardiac Cell Therapy Using Tissue Engineering.

Yanamandala M, Zhu W, Garry DJ, Kamp TJ, Hare JM, Jun HW, Yoon YS, Bursac N, Prabhu SD, Dorn GW 2nd, Bolli R, Kitsis RN, Zhang J.

J Am Coll Cardiol. 2017 Aug 8;70(6):766-775. doi: 10.1016/j.jacc.2017.06.012. Review.


In Reply.

Garry DJ, Ngai I, Bernstein PS, Judge NE.

Obstet Gynecol. 2017 Apr;129(4):751. doi: 10.1097/AOG.0000000000001957. No abstract available.


Dpath software reveals hierarchical haemato-endothelial lineages of Etv2 progenitors based on single-cell transcriptome analysis.

Gong W, Rasmussen TL, Singh BN, Koyano-Nakagawa N, Pan W, Garry DJ.

Nat Commun. 2017 Feb 9;8:14362. doi: 10.1038/ncomms14362.



Garry DJ.

Trans Am Clin Climatol Assoc. 2016;127:212-223. Review.


Neonatal Cardiac Scaffolds: Novel Matrices for Regenerative Studies.

Garry MG, Kren SM, Garry DJ.

J Vis Exp. 2016 Nov 5;(117). doi: 10.3791/54459.


Endoglin integrates BMP and Wnt signalling to induce haematopoiesis through JDP2.

Baik J, Magli A, Tahara N, Swanson SA, Koyano-Nakagawa N, Borges L, Stewart R, Garry DJ, Kawakami Y, Thomson JA, Perlingeiro RC.

Nat Commun. 2016 Oct 7;7:13101. doi: 10.1038/ncomms13101.


Shuffle Optimizer: A Program to Optimize DNA Shuffling for Protein Engineering.

Milligan JN, Garry DJ.

Methods Mol Biol. 2017;1472:35-45. doi: 10.1007/978-1-4939-6343-0_3.


Humanized organs in gene-edited animals.

Garry MG, Garry DJ.

Regen Med. 2016 Oct;11(7):617-9. doi: 10.2217/rme-2016-0096. Epub 2016 Sep 5. No abstract available.


Cardiotoxin Induced Injury and Skeletal Muscle Regeneration.

Garry GA, Antony ML, Garry DJ.

Methods Mol Biol. 2016;1460:61-71. doi: 10.1007/978-1-4939-3810-0_6.


Dystrophin-Deficient Cardiomyopathy.

Kamdar F, Garry DJ.

J Am Coll Cardiol. 2016 May 31;67(21):2533-46. doi: 10.1016/j.jacc.2016.02.081. Review.


Lineage Reprogramming of Fibroblasts into Proliferative Induced Cardiac Progenitor Cells by Defined Factors.

Lalit PA, Salick MR, Nelson DO, Squirrell JM, Shafer CM, Patel NG, Saeed I, Schmuck EG, Markandeya YS, Wong R, Lea MR, Eliceiri KW, Hacker TA, Crone WC, Kyba M, Garry DJ, Stewart R, Thomson JA, Downs KM, Lyons GE, Kamp TJ.

Cell Stem Cell. 2016 Mar 3;18(3):354-67. doi: 10.1016/j.stem.2015.12.001. Epub 2016 Feb 11.


Go to the Mattresses: A New Method for Human-Induced Pluripotent Stem Cell-Derived Cardiomyocyte Maturation.

Garry MG, Garry DJ.

Circ Res. 2015 Dec 4;117(12):982-3. doi: 10.1161/CIRCRESAHA.115.307794. No abstract available.


The Etv2-miR-130a Network Regulates Mesodermal Specification.

Singh BN, Kawakami Y, Akiyama R, Rasmussen TL, Garry MG, Gong W, Das S, Shi X, Koyano-Nakagawa N, Garry DJ.

Cell Rep. 2015 Nov 3;13(5):915-23. doi: 10.1016/j.celrep.2015.09.060. Epub 2015 Oct 22.


Skin Preparation for Prevention of Surgical Site Infection After Cesarean Delivery: A Randomized Controlled Trial.

Ngai IM, Van Arsdale A, Govindappagari S, Judge NE, Neto NK, Bernstein J, Bernstein PS, Garry DJ.

Obstet Gynecol. 2015 Dec;126(6):1251-7. doi: 10.1097/AOG.0000000000001118.


Lift NIH restrictions on chimera research.

Sharma A, Sebastiano V, Scott CT, Magnus D, Koyano-Nakagawa N, Garry DJ, Witte ON, Nakauchi H, Wu JC, Weissman IL, Wu SM.

Science. 2015 Nov 6;350(6261):640. doi: 10.1126/science.350.6261.640-a. Epub 2015 Nov 5. No abstract available.


Feedback Mechanisms Regulate Ets Variant 2 (Etv2) Gene Expression and Hematoendothelial Lineages.

Koyano-Nakagawa N, Shi X, Rasmussen TL, Das S, Walter CA, Garry DJ.

J Biol Chem. 2015 Nov 20;290(47):28107-19. doi: 10.1074/jbc.M115.662197. Epub 2015 Sep 22.


Transcription yield of fully 2'-modified RNA can be increased by the addition of thermostabilizing mutations to T7 RNA polymerase mutants.

Meyer AJ, Garry DJ, Hall B, Byrom MM, McDonald HG, Yang X, Yin YW, Ellington AD.

Nucleic Acids Res. 2015 Sep 3;43(15):7480-8. doi: 10.1093/nar/gkv734. Epub 2015 Jul 24.


Hedgehog Signaling during Appendage Development and Regeneration.

Singh BN, Koyano-Nakagawa N, Donaldson A, Weaver CV, Garry MG, Garry DJ.

Genes (Basel). 2015 Jun 23;6(2):417-35. doi: 10.3390/genes6020417. Review.


Human Induced Pluripotent Stem Cell-Derived Cardiomyocytes as a Model for Heart Development and Congenital Heart Disease.

Doyle MJ, Lohr JL, Chapman CS, Koyano-Nakagawa N, Garry MG, Garry DJ.

Stem Cell Rev. 2015 Oct;11(5):710-27. doi: 10.1007/s12015-015-9596-6. Review.


Somatic Cell Therapy for Chronic Heart Failure: In Search of Mechanistic Insights.

Garry GA, Garry DJ.

J Card Fail. 2015 Jul;21(7):583-5. doi: 10.1016/j.cardfail.2015.05.005. Epub 2015 May 15. No abstract available.


Kelch Repeat and BTB Domain Containing Protein 5 (Kbtbd5) Regulates Skeletal Muscle Myogenesis through the E2F1-DP1 Complex.

Gong W, Gohla RM, Bowlin KM, Koyano-Nakagawa N, Garry DJ, Shi X.

J Biol Chem. 2015 Jun 12;290(24):15350-61. doi: 10.1074/jbc.M114.629956. Epub 2015 May 4.


Cardiomyopathy in a dish: using human inducible pluripotent stem cells to model inherited cardiomyopathies.

Kamdar F, Klaassen Kamdar A, Koyano-Nakagawa N, Garry MG, Garry DJ.

J Card Fail. 2015 Sep;21(9):761-70. doi: 10.1016/j.cardfail.2015.04.010. Epub 2015 Apr 28. Review.


Inferring dynamic gene regulatory networks in cardiac differentiation through the integration of multi-dimensional data.

Gong W, Koyano-Nakagawa N, Li T, Garry DJ.

BMC Bioinformatics. 2015 Mar 7;16:74. doi: 10.1186/s12859-015-0460-0.


A Fatal Case of Strongyloidiasis in Pregnancy.

Buresch AM, Judge NE, Dayal AK, Garry DJ.

Obstet Gynecol. 2015 Jul;126(1):87-9. doi: 10.1097/AOG.0000000000000676.


The transcription factor Mesp1 interacts with cAMP-responsive element binding protein 1 (Creb1) and coactivates Ets variant 2 (Etv2) gene expression.

Shi X, Zirbes KM, Rasmussen TL, Ferdous A, Garry MG, Koyano-Nakagawa N, Garry DJ.

J Biol Chem. 2015 Apr 10;290(15):9614-25. doi: 10.1074/jbc.M114.614628. Epub 2015 Feb 18.


Acquisition of a quantitative, stoichiometrically conserved ratiometric marker of maturation status in stem cell-derived cardiac myocytes.

Bedada FB, Chan SS, Metzger SK, Zhang L, Zhang J, Garry DJ, Kamp TJ, Kyba M, Metzger JM.

Stem Cell Reports. 2014 Oct 14;3(4):594-605. doi: 10.1016/j.stemcr.2014.07.012. Epub 2014 Sep 4.


Sox7 is regulated by ETV2 during cardiovascular development.

Behrens AN, Zierold C, Shi X, Ren Y, Koyano-Nakagawa N, Garry DJ, Martin CM.

Stem Cells Dev. 2014 Sep 1;23(17):2004-13. doi: 10.1089/scd.2013.0525. Epub 2014 Jun 17.


Cooperative interaction of Etv2 and Gata2 regulates the development of endothelial and hematopoietic lineages.

Shi X, Richard J, Zirbes KM, Gong W, Lin G, Kyba M, Thomson JA, Koyano-Nakagawa N, Garry DJ.

Dev Biol. 2014 May 15;389(2):208-18. doi: 10.1016/j.ydbio.2014.02.018. Epub 2014 Feb 26.


Kbtbd5 is regulated by MyoD and restricted to the myogenic lineage.

Bowlin KM, Embree LJ, Garry MG, Garry DJ, Shi X.

Differentiation. 2013 Nov-Dec;86(4-5):184-91. doi: 10.1016/j.diff.2013.08.002. Epub 2013 Dec 20.


Patching the heart: cardiac repair from within and outside.

Ye L, Zimmermann WH, Garry DJ, Zhang J.

Circ Res. 2013 Sep 13;113(7):922-32. doi: 10.1161/CIRCRESAHA.113.300216. Review.


Unilateral adrenal infarction in pregnancy.

Green PA, Ngai IM, Lee TT, Garry DJ.

BMJ Case Rep. 2013 Aug 23;2013. pii: bcr2013009997. doi: 10.1136/bcr-2013-009997.

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