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Items: 41

1.

Evaluation of a novel cloud-based software platform for structured experiment design and linked data analytics.

Juergens H, Niemeijer M, Jennings-Antipov LD, Mans R, Morel J, van Maris AJA, Pronk JT, Gardner TS.

Sci Data. 2018 Oct 3;5:180195. doi: 10.1038/sdata.2018.195.

2.

Electronic Medical Record Reporting Enhances Proactive Psychiatric Consultation.

Finn CT, Thakur D, Shea KM, Riblet NBV, Lee HB, Heng G, Scott R, Gardner TS, Randlett S, LaRock T, Siriwardana N, Green G, Torrey WC.

Psychosomatics. 2018 Nov;59(6):561-566. doi: 10.1016/j.psym.2018.05.002. Epub 2018 May 17.

PMID:
30064731
3.

Rewriting yeast central carbon metabolism for industrial isoprenoid production.

Meadows AL, Hawkins KM, Tsegaye Y, Antipov E, Kim Y, Raetz L, Dahl RH, Tai A, Mahatdejkul-Meadows T, Xu L, Zhao L, Dasika MS, Murarka A, Lenihan J, Eng D, Leng JS, Liu CL, Wenger JW, Jiang H, Chao L, Westfall P, Lai J, Ganesan S, Jackson P, Mans R, Platt D, Reeves CD, Saija PR, Wichmann G, Holmes VF, Benjamin K, Hill PW, Gardner TS, Tsong AE.

Nature. 2016 Sep 29;537(7622):694-697. doi: 10.1038/nature19769. Epub 2016 Sep 21.

PMID:
27654918
4.

Judging synthetic biology risks.

Breitling R, Takano E, Gardner TS.

Science. 2015 Jan 9;347(6218):107. doi: 10.1126/science.aaa5253. No abstract available.

5.

Synthetic biology: evolution or revolution? A co-founder's perspective.

Gardner TS, Hawkins K.

Curr Opin Chem Biol. 2013 Dec;17(6):871-7. doi: 10.1016/j.cbpa.2013.09.013. Epub 2013 Oct 11. Review.

PMID:
24126196
6.

Synthetic biology: from hype to impact.

Gardner TS.

Trends Biotechnol. 2013 Mar;31(3):123-5. doi: 10.1016/j.tibtech.2013.01.018. Epub 2013 Feb 16. No abstract available.

PMID:
23419209
7.

Industrial fermentation of renewable diesel fuels.

Westfall PJ, Gardner TS.

Curr Opin Biotechnol. 2011 Jun;22(3):344-50. doi: 10.1016/j.copbio.2011.04.023. Epub 2011 May 24.

PMID:
21612911
8.

On the choice and number of microarrays for transcriptional regulatory network inference.

Cosgrove EJ, Gardner TS, Kolaczyk ED.

BMC Bioinformatics. 2010 Sep 9;11:454. doi: 10.1186/1471-2105-11-454.

9.

Reverse-engineering transcription control networks.

Gardner TS, Faith JJ.

Phys Life Rev. 2005 Mar;2(1):65-88. doi: 10.1016/j.plrev.2005.01.001.

PMID:
20416858
10.

Quorum-sensing regulation of a copper toxicity system in Pseudomonas aeruginosa.

Thaden JT, Lory S, Gardner TS.

J Bacteriol. 2010 May;192(10):2557-68. doi: 10.1128/JB.01528-09. Epub 2010 Mar 16.

11.

Predicting gene targets of perturbations via network-based filtering of mRNA expression compendia.

Cosgrove EJ, Zhou Y, Gardner TS, Kolaczyk ED.

Bioinformatics. 2008 Nov 1;24(21):2482-90. doi: 10.1093/bioinformatics/btn476. Epub 2008 Sep 8.

12.

Towards environmental systems biology of Shewanella.

Fredrickson JK, Romine MF, Beliaev AS, Auchtung JM, Driscoll ME, Gardner TS, Nealson KH, Osterman AL, Pinchuk G, Reed JL, Rodionov DA, Rodrigues JL, Saffarini DA, Serres MH, Spormann AM, Zhulin IB, Tiedje JM.

Nat Rev Microbiol. 2008 Aug;6(8):592-603. doi: 10.1038/nrmicro1947. Epub 2008 Jul 7. Review.

PMID:
18604222
13.

Identification of diverse carbon utilization pathways in Shewanella oneidensis MR-1 via expression profiling.

Driscoll ME, Romine MF, Juhn FS, Serres MH, McCue LA, Beliaev AS, Fredrickson JK, Gardner TS.

Genome Inform. 2007;18:287-98.

PMID:
18546496
14.

Predicting sigma28 promoters in eleven Shewanella genomes.

Song W, Juhn FS, Naiman DQ, Konstantinidis KT, Gardner TS, Ward MJ.

FEMS Microbiol Lett. 2008 Jun;283(2):223-30. doi: 10.1111/j.1574-6968.2008.01175.x. Epub 2008 Apr 19.

15.

Problem of track offset in optical disk systems.

Gerber RE, Gardner TS, Kay DB.

Appl Opt. 1998 Dec 10;37(35):8173-80.

PMID:
18301635
16.

Many Microbe Microarrays Database: uniformly normalized Affymetrix compendia with structured experimental metadata.

Faith JJ, Driscoll ME, Fusaro VA, Cosgrove EJ, Hayete B, Juhn FS, Schneider SJ, Gardner TS.

Nucleic Acids Res. 2008 Jan;36(Database issue):D866-70. Epub 2007 Oct 11.

17.

Lightweight genome viewer: portable software for browsing genomics data in its chromosomal context.

Faith JJ, Olson AJ, Gardner TS, Sachidanandam R.

BMC Bioinformatics. 2007 Sep 18;8:344.

19.

Size matters: network inference tackles the genome scale.

Hayete B, Gardner TS, Collins JJ.

Mol Syst Biol. 2007;3:77. Epub 2007 Feb 13. No abstract available.

20.

Large-scale mapping and validation of Escherichia coli transcriptional regulation from a compendium of expression profiles.

Faith JJ, Hayete B, Thaden JT, Mogno I, Wierzbowski J, Cottarel G, Kasif S, Collins JJ, Gardner TS.

PLoS Biol. 2007 Jan;5(1):e8.

21.

Chemogenomic profiling on a genome-wide scale using reverse-engineered gene networks.

di Bernardo D, Thompson MJ, Gardner TS, Chobot SE, Eastwood EL, Wojtovich AP, Elliott SJ, Schaus SE, Collins JJ.

Nat Biotechnol. 2005 Mar;23(3):377-83.

PMID:
15765094
22.

Programmable cells: interfacing natural and engineered gene networks.

Kobayashi H, Kaern M, Araki M, Chung K, Gardner TS, Cantor CR, Collins JJ.

Proc Natl Acad Sci U S A. 2004 Jun 1;101(22):8414-9. Epub 2004 May 24.

23.

Robust identification of large genetic networks.

Di Bernardo D, Gardner TS, Collins JJ.

Pac Symp Biocomput. 2004:486-97.

24.

Inferring genetic networks and identifying compound mode of action via expression profiling.

Gardner TS, di Bernardo D, Lorenz D, Collins JJ.

Science. 2003 Jul 4;301(5629):102-5.

25.

Neutralizing noise in gene networks.

Gardner TS, Collins JJ.

Nature. 2000 Jun 1;405(6786):520-1. No abstract available.

PMID:
10850696
26.

Construction of a genetic toggle switch in Escherichia coli.

Gardner TS, Cantor CR, Collins JJ.

Nature. 2000 Jan 20;403(6767):339-42.

PMID:
10659857
27.

A theory for controlling cell cycle dynamics using a reversibly binding inhibitor.

Gardner TS, Dolnik M, Collins JJ.

Proc Natl Acad Sci U S A. 1998 Nov 24;95(24):14190-5.

28.

Measurement of 1-[mgr ]m diam beams.

Cannon B, Gardner TS, Cohen DK.

Appl Opt. 1986 Sep 1;25(17):2981. No abstract available.

PMID:
18235562
29.

The possible roles of oral yeast ribonucleic acid (Y-RNA) in geriatrics and gerontology.

GARDNER TS.

Gerontologia. 1963;7:109-17. No abstract available.

PMID:
13946554
30.

MONOAMINE OXIDASE INHIBITORS. III. STRUCTURAL VARIATIONS IN 1-ALKYL AND 1-ARALKYL-1(OR 2)-ACYLHYDRAZINES.

GARDNER TS, WENIS E, LEE J.

J Med Pharm Chem. 1962 May;91:503-13. No abstract available.

PMID:
14056387
31.

The synthesis of tertiary pyridylmethylbenzylamines.

GARDNER TS, WENIS E, LEE J.

J Med Pharm Chem. 1961 May 18;3:461-70. No abstract available.

PMID:
13896917
32.

Monoamine oxidase inhibitors. II. Some amino and dialkylaminobenzyl hydrazines and their acyl derivatives.

GARDNER TS, WENIS E, LEE J.

J Med Pharm Chem. 1961 Mar 1;3:241-52. No abstract available.

PMID:
13896916
33.

Monoamine oxidase inhibitors. I. 1-Alkyl and 1-aralkyl-2-(picolinoyl and 5-methyl-3-isoxazolyl-carbonyl)hydrazines.

GARDNER TS, WENIS E, LEE J.

J Med Pharm Chem. 1960 Apr;2:133-45. No abstract available.

PMID:
13826540
34.

L-lyxoflavin.

GARDNER TS, WENIS E, LEE J.

Arch Biochem Biophys. 1951 Nov;34(1):98-104. No abstract available.

PMID:
14904039
35.

A critical evaluation of anti-reticular cytotoxic serum (ACS).

GARDNER TS, SPEAKER DM.

Tex Rep Biol Med. 1951;9(3):448-90. No abstract available.

PMID:
14866865
36.

The design of experiments for the cumulative effects of vitamins as anti-aging factors.

GARDNER TS.

J Tenn Acad Sci. 1948 Oct;23(4):291-306. No abstract available.

PMID:
18120622
38.
39.

Crystalline 1-iodo-1-desoxy-2,3: 4,6-diisopropylidene-L-sorbose.

GARDNER TS, LEE J.

J Org Chem. 1947 Sep;12(5):733-6. No abstract available.

PMID:
20264598
40.

The effect of sodium thiocyanate and yeast nucleic acid on the survival time of 700 day old albino mice.

GARDNER TS, FORBES FB.

J Gerontol. 1946 Oct;1(Pt 1 4):453-6. No abstract available.

PMID:
20273848
41.

The effect of yeast nucleic acid on the survival time of 600 day old albino mice.

GARDNER TS.

J Gerontol. 1946 Oct;1(Pt 1 4):445-52. No abstract available.

PMID:
20273847

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