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2-Amino-2, 3-Dihydro-1H-Indene-5-Carboxamide-Based Discoidin Domain Receptors 1 (DDR1) Inhibitors: Design, Synthesis, and In Vivo Anti-pancreatic Cancer Efficacy.

Zhu D, Huang H, Pinkas D, Luo J, Ganguly D, Fox AE, Arner E, Xiang Q, Tu ZC, Bullock AN, Brekken RA, Ding K, Lu X.

J Med Chem. 2019 Jul 16. doi: 10.1021/acs.jmedchem.9b00365. [Epub ahead of print]


Labour room violence in Uttar Pradesh, India: evidence from longitudinal study of pregnancy and childbirth.

Goli S, Ganguly D, Chakravorty S, Siddiqui MZ, Ram H, Rammohan A, Acharya SS.

BMJ Open. 2019 Jul 1;9(7):e028688. doi: 10.1136/bmjopen-2018-028688.


Information Extraction of Behavior Change Intervention Descriptions.

Ganguly D, Hou Y, Deleris LAA, Bonin F.

AMIA Jt Summits Transl Sci Proc. 2019 May 6;2019:182-191. eCollection 2019.


APELA Expression in Glioma, and Its Association with Patient Survival and Tumor Grade.

Ganguly D, Cai C, Sims MM, Yang CH, Thomas M, Cheng J, Saad AG, Pfeffer LM.

Pharmaceuticals (Basel). 2019 Mar 26;12(1). pii: E45. doi: 10.3390/ph12010045.


Cutting Edge: Dysregulated Endocannabinoid-Rheostat for Plasmacytoid Dendritic Cell Activation in a Systemic Lupus Endophenotype.

Rahaman O, Bhattacharya R, Liu CSC, Raychaudhuri D, Ghosh AR, Bandopadhyay P, Pal S, Goswami RP, Sircar G, Ghosh P, Ganguly D.

J Immunol. 2019 Mar 15;202(6):1674-1679. doi: 10.4049/jimmunol.1801521. Epub 2019 Feb 6.


Histopathological Changes of Placenta in Meconium Stained Liquor and Its Relevance in Fetal Distress: A Case Control Study.

Mondal TR, Bandyopadhyay G, Mukhopadhyay SG, Ganguly D.

Turk Patoloji Derg. 2019;35(2):107-118. doi: 10.5146/tjpath.2018.01444.


Seagrass litter decomposition: an additional nutrient source to shallow coastal waters.

Prasad MHK, Ganguly D, Paneerselvam A, Ramesh R, Purvaja R.

Environ Monit Assess. 2018 Dec 6;191(1):5. doi: 10.1007/s10661-018-7127-z.


Injectable, Magnetically Orienting Electrospun Fiber Conduits for Neuron Guidance.

Johnson CDL, Ganguly D, Zuidema JM, Cardinal TJ, Ziemba AM, Kearns KR, McCarthy SM, Thompson DM, Ramanath G, Borca-Tasciuc DA, Dutz S, Gilbert RJ.

ACS Appl Mater Interfaces. 2019 Jan 9;11(1):356-372. doi: 10.1021/acsami.8b18344. Epub 2018 Dec 19.


Improved Multiplex Immunohistochemistry for Immune Microenvironment Evaluation of Mouse Formalin-Fixed, Paraffin-Embedded Tissues.

Sorrelle N, Ganguly D, Dominguez ATA, Zhang Y, Huang H, Dahal LN, Burton N, Ziemys A, Brekken RA.

J Immunol. 2019 Jan 1;202(1):292-299. doi: 10.4049/jimmunol.1800878. Epub 2018 Dec 3.


RNA Polymerase II Read-Through Promotes Expression of Neighboring Genes in SAL1-PAP-XRN Retrograde Signaling.

Crisp PA, Smith AB, Ganguly DR, Murray KD, Eichten SR, Millar AA, Pogson BJ.

Plant Physiol. 2018 Dec;178(4):1614-1630. doi: 10.1104/pp.18.00758. Epub 2018 Oct 9.


Seagrass and macrophyte mediated CO2 and CH4 dynamics in shallow coastal waters.

Banerjee K, Paneerselvam A, Ramachandran P, Ganguly D, Singh G, Ramesh R.

PLoS One. 2018 Oct 8;13(10):e0203922. doi: 10.1371/journal.pone.0203922. eCollection 2018.


Activity-guided development of potent and selective toll-like receptor 9 antagonists.

Paul B, Rahaman O, Roy S, Pal S, Satish S, Mukherjee A, Ghosh AR, Raychaudhuri D, Bhattacharya R, Goon S, Ganguly D, Talukdar A.

Eur J Med Chem. 2018 Nov 5;159:187-205. doi: 10.1016/j.ejmech.2018.09.058. Epub 2018 Sep 26.


Microplastics along the beaches of southeast coast of India.

Karthik R, Robin RS, Purvaja R, Ganguly D, Anandavelu I, Raghuraman R, Hariharan G, Ramakrishna A, Ramesh R.

Sci Total Environ. 2018 Dec 15;645:1388-1399. doi: 10.1016/j.scitotenv.2018.07.242. Epub 2018 Jul 23.


Aerosol-induced intensification of cooling effect of clouds during Indian summer monsoon.

Sarangi C, Kanawade VP, Tripathi SN, Thomas A, Ganguly D.

Nat Commun. 2018 Sep 14;9(1):3754. doi: 10.1038/s41467-018-06015-5.


Chromatin Remodeling Factor BRG1 Regulates Stemness and Chemosensitivity of Glioma Initiating Cells.

Ganguly D, Sims M, Cai C, Fan M, Pfeffer LM.

Stem Cells. 2018 Dec;36(12):1804-1815. doi: 10.1002/stem.2909. Epub 2018 Nov 12.


Maternal dietary diversity and odds of low birth weight: Empirical findings from India.

Rammohan A, Goli S, Singh D, Ganguly D, Singh U.

Women Health. 2019 Apr;59(4):375-390. doi: 10.1080/03630242.2018.1487903. Epub 2018 Aug 17.


The critical role that STAT3 plays in glioma-initiating cells: STAT3 addiction in glioma.

Ganguly D, Fan M, Yang CH, Zbytek B, Finkelstein D, Roussel MF, Pfeffer LM.

Oncotarget. 2018 Apr 24;9(31):22095-22112. doi: 10.18632/oncotarget.25188. eCollection 2018 Apr 24.


Maintenance of pre-existing DNA methylation states through recurring excess-light stress.

Ganguly DR, Crisp PA, Eichten SR, Pogson BJ.

Plant Cell Environ. 2018 Jul;41(7):1657-1672. doi: 10.1111/pce.13324. Epub 2018 May 16.


Unsupervised Information Extraction from Behaviour Change Literature.

Ganguly D, Deleris LA, Mac Aonghusa P, Wright AJ, Finnerty AN, Norris E, Marques MM, Michie S.

Stud Health Technol Inform. 2018;247:680-684.


Cutting Edge: Piezo1 Mechanosensors Optimize Human T Cell Activation.

Liu CSC, Raychaudhuri D, Paul B, Chakrabarty Y, Ghosh AR, Rahaman O, Talukdar A, Ganguly D.

J Immunol. 2018 Feb 15;200(4):1255-1260. doi: 10.4049/jimmunol.1701118. Epub 2018 Jan 12.


KLK5 induces shedding of DPP4 from circulatory Th17 cells in type 2 diabetes.

Nargis T, Kumar K, Ghosh AR, Sharma A, Rudra D, Sen D, Chakrabarti S, Mukhopadhyay S, Ganguly D, Chakrabarti P.

Mol Metab. 2017 Nov;6(11):1529-1539. doi: 10.1016/j.molmet.2017.09.004. Epub 2017 Sep 27.


The Arabidopsis DNA Methylome Is Stable under Transgenerational Drought Stress.

Ganguly DR, Crisp PA, Eichten SR, Pogson BJ.

Plant Physiol. 2017 Dec;175(4):1893-1912. doi: 10.1104/pp.17.00744. Epub 2017 Oct 6.


Do Type I Interferons Link Systemic Autoimmunities and Metabolic Syndrome in a Pathogenetic Continuum?

Ganguly D.

Trends Immunol. 2018 Jan;39(1):28-43. doi: 10.1016/ Epub 2017 Aug 17. Review.


Rapid Recovery Gene Downregulation during Excess-Light Stress and Recovery in Arabidopsis.

Crisp PA, Ganguly DR, Smith AB, Murray KD, Estavillo GM, Searle I, Ford E, Bogdanović O, Lister R, Borevitz JO, Eichten SR, Pogson BJ.

Plant Cell. 2017 Aug;29(8):1836-1863. doi: 10.1105/tpc.16.00828. Epub 2017 Jul 13.


Design and development of benzoxazole derivatives with toll-like receptor 9 antagonism.

Roy S, Mukherjee A, Paul B, Rahaman O, Roy S, Maithri G, Ramya B, Pal S, Ganguly D, Talukdar A.

Eur J Med Chem. 2017 Jul 7;134:334-347. doi: 10.1016/j.ejmech.2017.03.086. Epub 2017 Apr 5.


Seagrass metabolism and carbon dynamics in a tropical coastal embayment.

Ganguly D, Singh G, Ramachandran P, Selvam AP, Banerjee K, Ramachandran R.

Ambio. 2017 Oct;46(6):667-679. doi: 10.1007/s13280-017-0916-8. Epub 2017 Mar 31.


A chloroplast retrograde signal, 3'-phosphoadenosine 5'-phosphate, acts as a secondary messenger in abscisic acid signaling in stomatal closure and germination.

Pornsiriwong W, Estavillo GM, Chan KX, Tee EE, Ganguly D, Crisp PA, Phua SY, Zhao C, Qiu J, Park J, Yong MT, Nisar N, Yadav AK, Schwessinger B, Rathjen J, Cazzonelli CI, Wilson PB, Gilliham M, Chen ZH, Pogson BJ.

Elife. 2017 Mar 21;6. pii: e23361. doi: 10.7554/eLife.23361.


Adipose Recruitment and Activation of Plasmacytoid Dendritic Cells Fuel Metaflammation.

Ghosh AR, Bhattacharya R, Bhattacharya S, Nargis T, Rahaman O, Duttagupta P, Raychaudhuri D, Liu CS, Roy S, Ghosh P, Khanna S, Chaudhuri T, Tantia O, Haak S, Bandyopadhyay S, Mukhopadhyay S, Chakrabarti P, Ganguly D.

Diabetes. 2016 Nov;65(11):3440-3452. Epub 2016 Aug 25.


C-terminal tail insertion of Bcl-xL in membrane occurs via partial unfolding and refolding cycle associating microsolvation.

Maity A, Sinha S, Ganguly D, Ghosh Dastidar S.

Phys Chem Chem Phys. 2016 Aug 24;18(34):24095-105. doi: 10.1039/c6cp02468h.


The Water Fraction of Calendula officinalis Hydroethanol Extract Stimulates In Vitro and In Vivo Proliferation of Dermal Fibroblasts in Wound Healing.

Dinda M, Mazumdar S, Das S, Ganguly D, Dasgupta UB, Dutta A, Jana K, Karmakar P.

Phytother Res. 2016 Oct;30(10):1696-1707. doi: 10.1002/ptr.5678. Epub 2016 Jul 18.


Uncoupling High Light Responses from Singlet Oxygen Retrograde Signaling and Spatial-Temporal Systemic Acquired Acclimation.

Carmody M, Crisp PA, d'Alessandro S, Ganguly D, Gordon M, Havaux M, Albrecht-Borth V, Pogson BJ.

Plant Physiol. 2016 Jul;171(3):1734-49. doi: 10.1104/pp.16.00404. Epub 2016 Jun 10.


Reconsidering plant memory: Intersections between stress recovery, RNA turnover, and epigenetics.

Crisp PA, Ganguly D, Eichten SR, Borevitz JO, Pogson BJ.

Sci Adv. 2016 Feb 19;2(2):e1501340. doi: 10.1126/sciadv.1501340. eCollection 2016 Feb. Review.


Sentence Recognition in Quiet and Noise by Pediatric Cochlear Implant Users: Relationships to Spoken Language.

Eisenberg LS, Fisher LM, Johnson KC, Ganguly DH, Grace T, Niparko JK; CDaCI Investigative Team.

Otol Neurotol. 2016 Feb;37(2):e75-81. doi: 10.1097/MAO.0000000000000910.


Correction: Molecular Heterogeneity in a Patient-Derived Glioblastoma Xenoline is Regulated by Different Cancer Stem Cell Populations.

Garner JM, Ellison DW, Finkelstein D, Ganguly D, Du Z, Sims M, Yang CH, Interiano RB, Davidoff AM, Pfeffer LM.

PLoS One. 2015 Dec 10;10(12):e0145052. doi: 10.1371/journal.pone.0145052. eCollection 2015.


Conformational Flexibility and pH Effects on Anisotropic Growth of Sheet-Like Assembly of Amphiphilic Peptides.

Huang H, Ganguly D, Chen J, Sun XS.

J Nanosci Nanotechnol. 2015 Jun;15(6):4470-9.


T(H)17 cells promote microbial killing and innate immune sensing of DNA via interleukin 26.

Meller S, Di Domizio J, Voo KS, Friedrich HC, Chamilos G, Ganguly D, Conrad C, Gregorio J, Le Roy D, Roger T, Ladbury JE, Homey B, Watowich S, Modlin RL, Kontoyiannis DP, Liu YJ, Arold ST, Gilliet M.

Nat Immunol. 2015 Sep;16(9):970-9. doi: 10.1038/ni.3211. Epub 2015 Jul 13.


Molecular heterogeneity in a patient-derived glioblastoma xenoline is regulated by different cancer stem cell populations.

Garner JM, Ellison DW, Finkelstein D, Ganguly D, Du Z, Sims M, Yang CH, Interiano RB, Davidoff AM, Pfeffer LM.

PLoS One. 2015 May 8;10(5):e0125838. doi: 10.1371/journal.pone.0125838. eCollection 2015. Erratum in: PLoS One. 2015;10(12):e0145052.


Modulation of the disordered conformational ensembles of the p53 transactivation domain by cancer-associated mutations.

Ganguly D, Chen J.

PLoS Comput Biol. 2015 Apr 21;11(4):e1004247. doi: 10.1371/journal.pcbi.1004247. eCollection 2015 Apr.


Insights into chloroplast biogenesis and development.

Pogson BJ, Ganguly D, Albrecht-Borth V.

Biochim Biophys Acta. 2015 Sep;1847(9):1017-24. doi: 10.1016/j.bbabio.2015.02.003. Epub 2015 Feb 8. Review.


Role of doxycycline to resolve different types of non-malignant lung and pleural pathology: The results of a pilot observation.

Bhattacharyya P, Dey R, Saha D, Nag S, Ghosh S, Chowdhury SR, Ganguly D.

Lung India. 2015 Jan-Feb;32(1):40-3. doi: 10.4103/0970-2113.148447.


A study on the formation of the nitro radical anion by ornidazole and its significant decrease in a structurally characterized binuclear Cu(II)-complex: impact in biology.

Santra RC, Ganguly D, Singh J, Mukhopadhyay K, Das S.

Dalton Trans. 2015 Jan 28;44(4):1992-2000. doi: 10.1039/c4dt03362k.


Developmental outcomes of early-identified children who are hard of hearing at 12 to 18 months of age.

Stika CJ, Eisenberg LS, Johnson KC, Henning SC, Colson BG, Ganguly DH, DesJardin JL.

Early Hum Dev. 2015 Jan;91(1):47-55. doi: 10.1016/j.earlhumdev.2014.11.005. Epub 2014 Dec 2.


Cationic antimicrobial peptides in psoriatic skin cooperate to break innate tolerance to self-DNA.

Lande R, Chamilos G, Ganguly D, Demaria O, Frasca L, Durr S, Conrad C, Schröder J, Gilliet M.

Eur J Immunol. 2015 Jan;45(1):203-13. doi: 10.1002/eji.201344277. Epub 2014 Nov 13.


Parental Support for Language Development During Joint Book Reading for Young Children With Hearing Loss.

DesJardin JL, Doll ER, Stika CJ, Eisenberg LS, Johnson KJ, Ganguly DH, Colson BG, Henning SC.

Commun Disord Q. 2014 May;35(3):167-181.


Genetic evidence for the role of plasmacytoid dendritic cells in systemic lupus erythematosus.

Sisirak V, Ganguly D, Lewis KL, Couillault C, Tanaka L, Bolland S, D'Agati V, Elkon KB, Reizis B.

J Exp Med. 2014 Sep 22;211(10):1969-76. doi: 10.1084/jem.20132522. Epub 2014 Sep 1.


Electrostatically accelerated encounter and folding for facile recognition of intrinsically disordered proteins.

Ganguly D, Zhang W, Chen J.

PLoS Comput Biol. 2013;9(11):e1003363. doi: 10.1371/journal.pcbi.1003363. Epub 2013 Nov 21.


The role of dendritic cells in autoimmunity.

Ganguly D, Haak S, Sisirak V, Reizis B.

Nat Rev Immunol. 2013 Aug;13(8):566-77. doi: 10.1038/nri3477. Epub 2013 Jul 5. Review.


Pregnancy outcome in pre-operative danazol treatment followed by laparoscopic correction in infertility associated with endometriosis.

Chatterjee S, Dey S, Chowdhury RG, Ganguly DD.

J Indian Med Assoc. 2012 Oct;110(10):694-9.


Evaluation of serological markers to monitor the disease status of Indian post kala-azar dermal leishmaniasis.

Mukhopadhyay D, Das NK, De Sarkar S, Manna A, Ganguly DN, Barbhuiya JN, Maitra AK, Hazra A, Chatterjee M.

Trans R Soc Trop Med Hyg. 2012 Nov;106(11):668-76. doi: 10.1016/j.trstmh.2012.07.005. Epub 2012 Aug 21.


Nucleic acid-containing amyloid fibrils potently induce type I interferon and stimulate systemic autoimmunity.

Di Domizio J, Dorta-Estremera S, Gagea M, Ganguly D, Meller S, Li P, Zhao B, Tan FK, Bi L, Gilliet M, Cao W.

Proc Natl Acad Sci U S A. 2012 Sep 4;109(36):14550-5. doi: 10.1073/pnas.1206923109. Epub 2012 Aug 17.

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