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Items: 1 to 50 of 82

1.

Dual RNA-Seq Uncovers Metabolic Amino Acids Dependency of the Intracellular Bacterium Piscirickettsia salmonis Infecting Atlantic Salmon.

Valenzuela-Miranda D, Gallardo-Escárate C.

Front Microbiol. 2018 Nov 27;9:2877. doi: 10.3389/fmicb.2018.02877. eCollection 2018.

2.

Coding/non-coding cross-talk in intestinal epithelium transcriptome gives insights on how fish respond to stocking density.

Gonçalves AT, Núñez-Acuña G, Détrée C, Gallardo-Escárate C.

Comp Biochem Physiol Part D Genomics Proteomics. 2018 Oct 30;29:14-23. doi: 10.1016/j.cbd.2018.10.005. [Epub ahead of print]

PMID:
30408678
3.

The Atlantic salmon (Salmo salar) antimicrobial peptide cathelicidin-2 is a molecular host-associated cue for the salmon louse (Lepeophtheirus salmonis).

Núñez-Acuña G, Gallardo-Escárate C, Fields DM, Shema S, Skiftesvik AB, Ormazábal I, Browman HI.

Sci Rep. 2018 Sep 13;8(1):13738. doi: 10.1038/s41598-018-31885-6.

4.

Single and repetitive microplastics exposures induce immune system modulation and homeostasis alteration in the edible mussel Mytilus galloprovincialis.

Détrée C, Gallardo-Escárate C.

Fish Shellfish Immunol. 2018 Dec;83:52-60. doi: 10.1016/j.fsi.2018.09.018. Epub 2018 Sep 6.

PMID:
30195903
5.

Comparative analysis of long non-coding RNAs in Atlantic and Coho salmon reveals divergent transcriptome responses associated with immunity and tissue repair during sea lice infestation.

Valenzuela-Muñoz V, Valenzuela-Miranda D, Gallardo-Escárate C.

Dev Comp Immunol. 2018 Oct;87:36-50. doi: 10.1016/j.dci.2018.05.016. Epub 2018 May 24.

PMID:
29803715
6.

Metagenomic study of bacterial microbiota in persistent endodontic infections using Next-generation sequencing.

Sánchez-Sanhueza G, Bello-Toledo H, González-Rocha G, Gonçalves AT, Valenzuela V, Gallardo-Escárate C.

Int Endod J. 2018 Dec;51(12):1336-1348. doi: 10.1111/iej.12953. Epub 2018 Jun 9.

PMID:
29786880
7.

Hydrogen peroxide treatment modulates the transcription of sex-related genes in the sea lice Caligus rogercresseyi.

Farlora R, Valdebenito-Aguayo F, Valenzuela-Muñoz V, Gallardo-Escárate C.

J Fish Dis. 2018 Jun;41(6):921-926. doi: 10.1111/jfd.12700. Epub 2017 Oct 6. No abstract available.

PMID:
28984365
8.

Transcriptome mining of immune-related genes in the muricid snail Concholepas concholepas.

Détrée C, López-Landavery E, Gallardo-Escárate C, Lafarga-De la Cruz F.

Fish Shellfish Immunol. 2017 Dec;71:69-75. doi: 10.1016/j.fsi.2017.09.061. Epub 2017 Sep 28.

PMID:
28962882
9.

Influences of thermal environment on fish growth.

Boltaña S, Sanhueza N, Aguilar A, Gallardo-Escarate C, Arriagada G, Valdes JA, Soto D, Quiñones RA.

Ecol Evol. 2017 Jul 26;7(17):6814-6825. doi: 10.1002/ece3.3239. eCollection 2017 Sep.

10.

Ocean acidification and pathogen exposure modulate the immune response of the edible mussel Mytilus chilensis.

Castillo N, Saavedra LM, Vargas CA, Gallardo-Escárate C, Détrée C.

Fish Shellfish Immunol. 2017 Nov;70:149-155. doi: 10.1016/j.fsi.2017.08.047. Epub 2017 Sep 1.

PMID:
28870859
11.

MicroRNA-based transcriptomic responses of Atlantic salmon during infection by the intracellular bacterium Piscirickettsia salmonis.

Valenzuela-Miranda D, Valenzuela-Muñoz V, Farlora R, Gallardo-Escárate C.

Dev Comp Immunol. 2017 Dec;77:287-296. doi: 10.1016/j.dci.2017.08.016. Epub 2017 Sep 1.

PMID:
28870451
12.

Modulation of Atlantic salmon miRNome response to sea louse infestation.

Valenzuela-Muñoz V, Novoa B, Figueras A, Gallardo-Escárate C.

Dev Comp Immunol. 2017 Nov;76:380-391. doi: 10.1016/j.dci.2017.07.009. Epub 2017 Jul 12.

PMID:
28711463
13.

Functional Annotation of All Salmonid Genomes (FAASG): an international initiative supporting future salmonid research, conservation and aquaculture.

Macqueen DJ, Primmer CR, Houston RD, Nowak BF, Bernatchez L, Bergseth S, Davidson WS, Gallardo-Escárate C, Goldammer T, Guiguen Y, Iturra P, Kijas JW, Koop BF, Lien S, Maass A, Martin SAM, McGinnity P, Montecino M, Naish KA, Nichols KM, Ólafsson K, Omholt SW, Palti Y, Plastow GS, Rexroad CE Rd, Rise ML, Ritchie RJ, Sandve SR, Schulte PM, Tello A, Vidal R, Vik JO, Wargelius A, Yáñez JM; FAASG Consortium.

BMC Genomics. 2017 Jun 27;18(1):484. doi: 10.1186/s12864-017-3862-8.

14.

Functional Diets Modulate lncRNA-Coding RNAs and Gene Interactions in the Intestine of Rainbow Trout Oncorhynchus mykiss.

Núñez-Acuña G, Détrée C, Gallardo-Escárate C, Gonçalves AT.

Mar Biotechnol (NY). 2017 Jun;19(3):287-300. doi: 10.1007/s10126-017-9750-z. Epub 2017 May 12.

PMID:
28500613
15.

Functional diets modulate the acute phase protein response in Oncorhynchus mykiss subjected to chronic stress and challenged with Vibrio anguillarum.

Castro-Osses D, Carrera-Naipil C, Gallardo-Escárate C, Gonçalves AT.

Fish Shellfish Immunol. 2017 Jul;66:62-70. doi: 10.1016/j.fsi.2017.05.001. Epub 2017 May 2.

PMID:
28476670
16.

Transcriptomic analysis of the hepatic response to stress in the red cusk-eel (Genypterus chilensis): Insights into lipid metabolism, oxidative stress and liver steatosis.

Naour S, Espinoza BM, Aedo JE, Zuloaga R, Maldonado J, Bastias-Molina M, Silva H, Meneses C, Gallardo-Escarate C, Molina A, Valdés JA.

PLoS One. 2017 Apr 27;12(4):e0176447. doi: 10.1371/journal.pone.0176447. eCollection 2017.

17.

In the shadow: The emerging role of long non-coding RNAs in the immune response of Atlantic salmon.

Tarifeño-Saldivia E, Valenzuela-Miranda D, Gallardo-Escárate C.

Dev Comp Immunol. 2017 Aug;73:193-205. doi: 10.1016/j.dci.2017.03.024. Epub 2017 Mar 31.

PMID:
28373064
18.

Intestinal transcriptome modulation by functional diets in rainbow trout: A high-throughput sequencing appraisal to highlight GALT immunomodulation.

Gonçalves AT, Valenzuela-Muñoz V, Gallardo-Escárate C.

Fish Shellfish Immunol. 2017 May;64:325-338. doi: 10.1016/j.fsi.2017.03.022. Epub 2017 Mar 12.

PMID:
28300682
19.
20.

Microbiome dynamic modulation through functional diets based on pre- and probiotics (mannan-oligosaccharides and Saccharomyces cerevisiae) in juvenile rainbow trout (Oncorhynchus mykiss).

Gonçalves AT, Gallardo-Escárate C.

J Appl Microbiol. 2017 May;122(5):1333-1347. doi: 10.1111/jam.13437. Epub 2017 Apr 4.

PMID:
28256031
21.

Extending Immunological Profiling in the Gilthead Sea Bream, Sparus aurata, by Enriched cDNA Library Analysis, Microarray Design and Initial Studies upon the Inflammatory Response to PAMPs.

Boltaña S, Castellana B, Goetz G, Tort L, Teles M, Mulero V, Novoa B, Figueras A, Goetz FW, Gallardo-Escarate C, Planas JV, Mackenzie S.

Int J Mol Sci. 2017 Feb 3;18(2). pii: E317. doi: 10.3390/ijms18020317.

22.

Long non-coding RNAs are associated with spatiotemporal gene expression profiles in the marine gastropod Tegula atra.

Détrée C, Núñez-Acuña G, Tapia F, Gallardo-Escárate C.

Mar Genomics. 2017 Jun;33:39-45. doi: 10.1016/j.margen.2017.01.002. Epub 2017 Jan 12.

PMID:
28089489
23.

Uncovering iron regulation with species-specific transcriptome patterns in Atlantic and coho salmon during a Caligus rogercresseyi infestation.

Valenzuela-Muñoz V, Boltaña S, Gallardo-Escárate C.

J Fish Dis. 2017 Sep;40(9):1169-1184. doi: 10.1111/jfd.12592. Epub 2017 Jan 11.

PMID:
28075024
24.

Iron metabolism modulation in Atlantic salmon infested with the sea lice Lepeophtheirus salmonis and Caligus rogercresseyi: A matter of nutritional immunity?

Valenzuela-Muñoz V, Gallardo-Escárate C.

Fish Shellfish Immunol. 2017 Jan;60:97-102. doi: 10.1016/j.fsi.2016.11.045. Epub 2016 Nov 22.

PMID:
27888129
25.

De novo transcriptome analysis of the red seaweed Gracilaria chilensis and identification of linkers associated with phycobilisomes.

Vorphal MA, Gallardo-Escárate C, Valenzuela-Muñoz V, Dagnino-Leone J, Vásquez JA, Martínez-Oyanedel J, Bunster M.

Mar Genomics. 2017 Feb;31:17-19. doi: 10.1016/j.margen.2016.11.001. Epub 2016 Nov 11.

PMID:
27843115
26.

Density-dependent effects of Caligus rogercresseyi infestation on the immune responses of Salmo salar.

Boltaña S, Sanchez M, Valenzuela V, Gallardo-Escárate C.

Fish Shellfish Immunol. 2016 Dec;59:365-374. doi: 10.1016/j.fsi.2016.11.002. Epub 2016 Nov 3.

PMID:
27818345
27.

Novel insights into the response of Atlantic salmon (Salmo salar) to Piscirickettsia salmonis: Interplay of coding genes and lncRNAs during bacterial infection.

Valenzuela-Miranda D, Gallardo-Escárate C.

Fish Shellfish Immunol. 2016 Dec;59:427-438. doi: 10.1016/j.fsi.2016.11.001. Epub 2016 Nov 3.

PMID:
27818337
28.

Comparative immunity of Salmo salar and Oncorhynchus kisutch during infestation with the sea louse Caligus rogercresseyi: An enrichment transcriptome analysis.

Valenzuela-Muñoz V, Boltaña S, Gallardo-Escárate C.

Fish Shellfish Immunol. 2016 Dec;59:276-287. doi: 10.1016/j.fsi.2016.10.046. Epub 2016 Nov 1.

PMID:
27815198
29.

In vitro modulation of Drimys winteri bark extract and the active compound polygodial on Salmo salar immune genes after exposure to Saprolegnia parasitica.

Pereira-Torres D, Gonçalves AT, Ulloa V, Martínez R, Carrasco H, Olea AF, Espinoza L, Gallardo-Escárate C, Astuya A.

Fish Shellfish Immunol. 2016 Dec;59:103-108. doi: 10.1016/j.fsi.2016.10.035. Epub 2016 Oct 21.

PMID:
27777106
30.

Uncovering the Complex Transcriptome Response of Mytilus chilensis against Saxitoxin: Implications of Harmful Algal Blooms on Mussel Populations.

Detree C, Núñez-Acuña G, Roberts S, Gallardo-Escárate C.

PLoS One. 2016 Oct 20;11(10):e0165231. doi: 10.1371/journal.pone.0165231. eCollection 2016.

31.

Pesticides Drive Stochastic Changes in the Chemoreception and Neurotransmission System of Marine Ectoparasites.

Núñez-Acuña G, Boltaña S, Gallardo-Escárate C.

Int J Mol Sci. 2016 May 31;17(6). pii: E700. doi: 10.3390/ijms17060700.

32.

Evidence for the Induction of Key Components of the NOTCH Signaling Pathway via Deltamethrin and Azamethiphos Treatment in the Sea Louse Caligus rogercresseyi.

Boltaña S, Chávez-Mardones J, Valenzuela-Muñoz V, Gallardo-Escárate C.

Int J Mol Sci. 2016 May 12;17(5). pii: E304. doi: 10.3390/ijms17050304.

33.

Aquaporin family genes exhibit developmentally-regulated and host-dependent transcription patterns in the sea louse Caligus rogercresseyi.

Farlora R, Valenzuela-Muñoz V, Chávez-Mardones J, Gallardo-Escárate C.

Gene. 2016 Jul 1;585(1):119-127. doi: 10.1016/j.gene.2016.03.035. Epub 2016 Mar 23.

PMID:
27016299
34.

Long noncoding RNAs (lncRNAs) dynamics evidence immunomodulation during ISAV-Infected Atlantic salmon (Salmo salar).

Boltaña S, Valenzuela-Miranda D, Aguilar A, Mackenzie S, Gallardo-Escárate C.

Sci Rep. 2016 Mar 4;6:22698. doi: 10.1038/srep22698.

35.

Transcriptome mining: Multigene panel to test delousing drug response in the sea louse Caligus rogercresseyi.

Valenzuela-Muñoz V, Gallardo-Escárate C.

Mar Genomics. 2016 Feb;25:103-113. doi: 10.1016/j.margen.2015.12.005. Epub 2015 Dec 23.

PMID:
26723558
36.

mRNA-seq reveals skeletal muscle atrophy in response to handling stress in a marine teleost, the red cusk-eel (Genypterus chilensis).

Aedo JE, Maldonado J, Aballai V, Estrada JM, Bastias-Molina M, Meneses C, Gallardo-Escarate C, Silva H, Molina A, Valdés JA.

BMC Genomics. 2015 Dec 1;16:1024. doi: 10.1186/s12864-015-2232-7.

37.

Transcription expression of immune-related genes from Caligus rogercresseyi evidences host-dependent patterns on Atlantic and coho salmon.

Vera-Bizama F, Valenzuela-Muñoz V, Gonçalves AT, Marambio JP, Hawes C, Wadsworth S, Gallardo-Escárate C.

Fish Shellfish Immunol. 2015 Dec;47(2):725-31. doi: 10.1016/j.fsi.2015.10.022. Epub 2015 Oct 19.

PMID:
26492996
38.

Transcriptome immunomodulation of in-feed additives in Atlantic salmon Salmo salar infested with sea lice Caligus rogercresseyi.

Núñez-Acuña G, Gonçalves AT, Valenzuela-Muñoz V, Pino-Marambio J, Wadsworth S, Gallardo-Escárate C.

Fish Shellfish Immunol. 2015 Nov;47(1):450-60. doi: 10.1016/j.fsi.2015.09.009. Epub 2015 Sep 10.

PMID:
26363235
39.

Next-Generation Transcriptome Profiling of the Salmon Louse Caligus rogercresseyi Exposed to Deltamethrin (AlphaMax™): Discovery of Relevant Genes and Sex-Related Differences.

Chávez-Mardones J, Gallardo-Escárate C.

Mar Biotechnol (NY). 2015 Dec;17(6):793-810. doi: 10.1007/s10126-015-9661-9. Epub 2015 Aug 26.

PMID:
26307019
40.

Saxitoxin Modulates Immunological Parameters and Gene Transcription in Mytilus chilensis Hemocytes.

Astuya A, Carrera C, Ulloa V, Aballay A, Núñez-Acuña G, Hégaret H, Gallardo-Escárate C.

Int J Mol Sci. 2015 Jul 6;16(7):15235-50. doi: 10.3390/ijms160715235.

41.

Insulin-like growth factor-1 suppresses the Myostatin signaling pathway during myogenic differentiation.

Retamales A, Zuloaga R, Valenzuela CA, Gallardo-Escarate C, Molina A, Valdés JA.

Biochem Biophys Res Commun. 2015 Aug 21;464(2):596-602. doi: 10.1016/j.bbrc.2015.07.018. Epub 2015 Jul 4.

PMID:
26151859
42.

Characterization of the growth-related transcriptome in California red abalone (Haliotis rufescens) through RNA-Seq analysis.

Valenzuela-Miranda D, Del Río-Portilla MA, Gallardo-Escárate C.

Mar Genomics. 2015 Dec;24 Pt 3:199-202. doi: 10.1016/j.margen.2015.05.009. Epub 2015 May 23.

PMID:
26006295
43.

Spatio-temporal transcriptome analysis in the marine snail Tegula atra along central-northern Chile (28-31°S).

Tapia FJ, Gallardo-Escárate C.

Mar Genomics. 2015 Oct;23:61-5. doi: 10.1016/j.margen.2015.05.005. Epub 2015 May 19.

PMID:
26001513
44.

Identification of microRNAs associated with sexual maturity in rainbow trout brain and testis through small RNA deep sequencing.

Farlora R, Valenzuela-Miranda D, Alarcón-Matus P, Gallardo-Escárate C.

Mol Reprod Dev. 2015 Sep;82(9):651-62. doi: 10.1002/mrd.22499. Epub 2015 May 15.

PMID:
25983107
45.

Cathepsin Gene Family Reveals Transcriptome Patterns Related to the Infective Stages of the Salmon Louse Caligus rogercresseyi.

Maldonado-Aguayo W, Chávez-Mardones J, Gonçalves AT, Gallardo-Escárate C.

PLoS One. 2015 Apr 29;10(4):e0123954. doi: 10.1371/journal.pone.0123954. eCollection 2015.

46.

High-throughput transcriptome analysis of ISAV-infected Atlantic salmon Salmo salar unravels divergent immune responses associated to head-kidney, liver and gills tissues.

Valenzuela-Miranda D, Boltaña S, Cabrejos ME, Yáñez JM, Gallardo-Escárate C.

Fish Shellfish Immunol. 2015 Aug;45(2):367-77. doi: 10.1016/j.fsi.2015.04.003. Epub 2015 Apr 21.

PMID:
25910847
47.

Transcriptomic insights on the ABC transporter gene family in the salmon louse Caligus rogercresseyi.

Valenzuela-Muñoz V, Sturm A, Gallardo-Escárate C.

Parasit Vectors. 2015 Apr 9;8:209. doi: 10.1186/s13071-015-0801-x.

48.

Prohibitin-2 gene reveals sex-related differences in the salmon louse Caligus rogercresseyi.

Farlora R, Nuñez-Acuña G, Gallardo-Escárate C.

Gene. 2015 Jun 10;564(1):73-80. doi: 10.1016/j.gene.2015.03.045. Epub 2015 Mar 23.

PMID:
25813873
49.

From the viral perspective: infectious salmon anemia virus (ISAV) transcriptome during the infective process in Atlantic salmon (Salmo salar).

Valenzuela-Miranda D, Cabrejos ME, Yañez JM, Gallardo-Escárate C.

Mar Genomics. 2015 Apr;20:39-43. doi: 10.1016/j.margen.2014.12.007. Epub 2015 Jan 2.

PMID:
25561340
50.

Transcriptome characterization of the ascidian Pyura chilensis using 454-pyrosequencing data from two distant localities on the southeast Pacific.

Haye PA, Gallardo-Escárate C.

Mar Genomics. 2015 Apr;20:19-22. doi: 10.1016/j.margen.2014.12.002. Epub 2014 Dec 16.

PMID:
25526667

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