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Items: 1 to 50 of 79

1.

Intrinsic noise, Delta-Notch signalling and delayed reactions promote sustained, coherent, synchronized oscillations in the presomitic mesoderm.

Baron JW, Galla T.

J R Soc Interface. 2019 Nov 29;16(160):20190436. doi: 10.1098/rsif.2019.0436. Epub 2019 Nov 27.

PMID:
31771454
2.

Consensus and diversity in multistate noisy voter models.

Herrerías-Azcué F, Galla T.

Phys Rev E. 2019 Aug;100(2-1):022304. doi: 10.1103/PhysRevE.100.022304.

PMID:
31574746
3.

Motion, fixation probability and the choice of an evolutionary process.

Herrerías-Azcué F, Pérez-Muñuzuri V, Galla T.

PLoS Comput Biol. 2019 Aug 5;15(8):e1007238. doi: 10.1371/journal.pcbi.1007238. eCollection 2019 Aug.

4.

Quantitative single-cell live imaging links HES5 dynamics with cell-state and fate in murine neurogenesis.

Manning CS, Biga V, Boyd J, Kursawe J, Ymisson B, Spiller DG, Sanderson CM, Galla T, Rattray M, Papalopulu N.

Nat Commun. 2019 Jun 27;10(1):2835. doi: 10.1038/s41467-019-10734-8.

5.

Stochastic fluctuations and quasipattern formation in reaction-diffusion systems with anomalous transport.

Baron JW, Galla T.

Phys Rev E. 2019 May;99(5-1):052124. doi: 10.1103/PhysRevE.99.052124.

PMID:
31212552
6.

Classical stochastic systems with fast-switching environments: Reduced master equations, their interpretation, and limits of validity.

Hufton PG, Lin YT, Galla T.

Phys Rev E. 2019 Mar;99(3-1):032121. doi: 10.1103/PhysRevE.99.032121.

PMID:
30999530
7.
8.

Effective diffusion coefficients in reaction-diffusion systems with anomalous transport.

Baron JW, Galla T.

Phys Rev E. 2019 Jan;99(1-1):012212. doi: 10.1103/PhysRevE.99.012212.

PMID:
30780224
9.

Computational Model of Progression to Multiple Myeloma Identifies Optimum Screening Strategies.

Altrock PM, Ferlic J, Galla T, Tomasson MH, Michor F.

JCO Clin Cancer Inform. 2018 Dec;2:1-12. doi: 10.1200/CCI.17.00131.

10.

How successful are mutants in multiplayer games with fluctuating environments? Sojourn times, fixation and optimal switching.

Baron JW, Galla T.

R Soc Open Sci. 2018 Mar 21;5(3):172176. doi: 10.1098/rsos.172176. eCollection 2018 Mar.

11.

The prevalence of chaotic dynamics in games with many players.

Sanders JBT, Farmer JD, Galla T.

Sci Rep. 2018 Mar 20;8(1):4902. doi: 10.1038/s41598-018-22013-5.

12.

Stirring does not make populations well mixed.

Herrerías-Azcué F, Pérez-Muñuzuri V, Galla T.

Sci Rep. 2018 Mar 6;8(1):4068. doi: 10.1038/s41598-018-22062-w.

13.

The effects of heterogeneity on stochastic cycles in epidemics.

Herrerías-Azcué F, Galla T.

Sci Rep. 2017 Oct 11;7(1):13008. doi: 10.1038/s41598-017-12606-x.

14.

Mechanisms of stochastic onset and termination of atrial fibrillation studied with a cellular automaton model.

Lin YT, Chang ET, Eatock J, Galla T, Clayton RH.

J R Soc Interface. 2017 Mar;14(128). pii: 20160968. doi: 10.1098/rsif.2016.0968.

15.

Effects of population growth on the success of invading mutants.

Ashcroft P, Smith CER, Garrod M, Galla T.

J Theor Biol. 2017 May 7;420:232-240. doi: 10.1016/j.jtbi.2017.03.014. Epub 2017 Mar 18.

PMID:
28322875
16.

Stochastic evolution in populations of ideas.

Nicole R, Sollich P, Galla T.

Sci Rep. 2017 Jan 18;7:40580. doi: 10.1038/srep40580.

17.

Progress of the attractiveness of Rheumatology among medical speciality training candidates (MIR) in Spain.

Andréu JL, Silva-Fernández L, Galla T.

Reumatol Clin. 2018 May - Jun;14(3):150-154. doi: 10.1016/j.reuma.2016.11.003. Epub 2016 Dec 14. English, Spanish.

18.

Stochastic transport in the presence of spatial disorder: Fluctuation-induced corrections to homogenization.

Russell MJ, Jensen OE, Galla T.

Phys Rev E. 2016 Oct;94(4-1):042121. Epub 2016 Oct 17.

PMID:
27841511
19.

Stochasticity in the miR-9/Hes1 oscillatory network can account for clonal heterogeneity in the timing of differentiation.

Phillips NE, Manning CS, Pettini T, Biga V, Marinopoulou E, Stanley P, Boyd J, Bagnall J, Paszek P, Spiller DG, White MR, Goodfellow M, Galla T, Rattray M, Papalopulu N.

Elife. 2016 Oct 4;5. pii: e16118. doi: 10.7554/eLife.16118.

20.

Intrinsic noise in systems with switching environments.

Hufton PG, Lin YT, Galla T, McKane AJ.

Phys Rev E. 2016 May;93(5):052119. doi: 10.1103/PhysRevE.93.052119. Epub 2016 May 10.

PMID:
27300842
21.

Emergence of Cooperative Long-Term Market Loyalty in Double Auction Markets.

Alorić A, Sollich P, McBurney P, Galla T.

PLoS One. 2016 Apr 27;11(4):e0154606. doi: 10.1371/journal.pone.0154606. eCollection 2016.

22.

A Stochastic Individual-Based Model of the Progression of Atrial Fibrillation in Individuals and Populations.

Chang ET, Lin YT, Galla T, Clayton RH, Eatock J.

PLoS One. 2016 Apr 12;11(4):e0152349. doi: 10.1371/journal.pone.0152349. eCollection 2016.

23.

Bursting noise in gene expression dynamics: linking microscopic and mesoscopic models.

Lin YT, Galla T.

J R Soc Interface. 2016 Jan;13(114):20150772. doi: 10.1098/rsif.2015.0772.

24.

Publisher's Note: Generating functionals and Gaussian approximations for interruptible delay reactions [Phys. Rev. E 92, 042105 (2015)].

Brett T, Galla T.

Phys Rev E Stat Nonlin Soft Matter Phys. 2015 Oct;92(4):049902. doi: 10.1103/PhysRevE.92.049902. Epub 2015 Oct 19.

PMID:
26565372
25.

When the mean is not enough: Calculating fixation time distributions in birth-death processes.

Ashcroft P, Traulsen A, Galla T.

Phys Rev E Stat Nonlin Soft Matter Phys. 2015 Oct;92(4):042154. doi: 10.1103/PhysRevE.92.042154. Epub 2015 Oct 28.

PMID:
26565215
26.

Generating functionals and Gaussian approximations for interruptible delay reactions.

Brett T, Galla T.

Phys Rev E Stat Nonlin Soft Matter Phys. 2015 Oct;92(4):042105. doi: 10.1103/PhysRevE.92.042105. Epub 2015 Oct 5. Erratum in: Phys Rev E Stat Nonlin Soft Matter Phys. 2015 Oct;92(4):049902.

PMID:
26565166
27.

Competition for resources can explain patterns of social and individual learning in nature.

Smolla M, Gilman RT, Galla T, Shultz S.

Proc Biol Sci. 2015 Sep 22;282(1815). pii: 20151405. doi: 10.1098/rspb.2015.1405.

28.

Stochastic tunneling and metastable states during the somatic evolution of cancer.

Ashcroft P, Michor F, Galla T.

Genetics. 2015 Apr;199(4):1213-28. doi: 10.1534/genetics.114.171553. Epub 2015 Jan 26.

29.

Fixation in finite populations evolving in fluctuating environments.

Ashcroft P, Altrock PM, Galla T.

J R Soc Interface. 2014 Nov 6;11(100):20140663. doi: 10.1098/rsif.2014.0663.

30.

Gaussian approximations for stochastic systems with delay: chemical Langevin equation and application to a Brusselator system.

Brett T, Galla T.

J Chem Phys. 2014 Mar 28;140(12):124112. doi: 10.1063/1.4867786.

PMID:
24697429
31.

microRNA input into a neural ultradian oscillator controls emergence and timing of alternative cell states.

Goodfellow M, Phillips NE, Manning C, Galla T, Papalopulu N.

Nat Commun. 2014 Mar 4;5:3399. doi: 10.1038/ncomms4399.

32.

Pattern formation in individual-based systems with time-varying parameters.

Ashcroft P, Galla T.

Phys Rev E Stat Nonlin Soft Matter Phys. 2013 Dec;88(6):062104. Epub 2013 Dec 2.

PMID:
24483383
33.

Stochastic processes with distributed delays: chemical Langevin equation and linear-noise approximation.

Brett T, Galla T.

Phys Rev Lett. 2013 Jun 21;110(25):250601. Epub 2013 Jun 18.

PMID:
23829723
34.

Voter models with conserved dynamics.

Caccioli F, Dall'Asta L, Galla T, Rogers T.

Phys Rev E Stat Nonlin Soft Matter Phys. 2013 May;87(5):052114. Epub 2013 May 10.

PMID:
23767494
35.

Complex dynamics in learning complicated games.

Galla T, Farmer JD.

Proc Natl Acad Sci U S A. 2013 Jan 22;110(4):1232-6. doi: 10.1073/pnas.1109672110. Epub 2013 Jan 7.

36.

Mixing times in evolutionary game dynamics.

Black AJ, Traulsen A, Galla T.

Phys Rev Lett. 2012 Jul 13;109(2):028101. Epub 2012 Jul 9.

PMID:
23030206
37.

Demographic noise and piecewise deterministic Markov processes.

Realpe-Gomez J, Galla T, McKane AJ.

Phys Rev E Stat Nonlin Soft Matter Phys. 2012 Jul;86(1 Pt 1):011137. Epub 2012 Jul 30.

PMID:
23005398
38.

The mechanics of stochastic slowdown in evolutionary games.

Altrock PM, Traulsen A, Galla T.

J Theor Biol. 2012 Oct 21;311:94-106. doi: 10.1016/j.jtbi.2012.07.003. Epub 2012 Jul 16.

PMID:
22814474
39.

Complexity measures, emergence, and multiparticle correlations.

Galla T, Gühne O.

Phys Rev E Stat Nonlin Soft Matter Phys. 2012 Apr;85(4 Pt 2):046209. Epub 2012 Apr 13.

PMID:
22680558
40.

Agent-specific impact of single trades in financial markets.

Bladon AJ, Moro E, Galla T.

Phys Rev E Stat Nonlin Soft Matter Phys. 2012 Mar;85(3 Pt 2):036103. Epub 2012 Mar 12.

PMID:
22587145
41.

Learning dynamics in public goods games.

Bladon AJ, Galla T.

Phys Rev E Stat Nonlin Soft Matter Phys. 2011 Oct;84(4 Pt 1):041132. Epub 2011 Oct 21.

PMID:
22181112
42.

Stochastic waves in a Brusselator model with nonlocal interaction.

Biancalani T, Galla T, McKane AJ.

Phys Rev E Stat Nonlin Soft Matter Phys. 2011 Aug;84(2 Pt 2):026201. Epub 2011 Aug 5.

PMID:
21929075
43.

Imitation, internal absorption and the reversal of local drift in stochastic evolutionary games.

Galla T.

J Theor Biol. 2011 Jan 21;269(1):46-56. doi: 10.1016/j.jtbi.2010.09.035. Epub 2010 Oct 1.

PMID:
20888345
44.

Evolutionary dynamics, intrinsic noise, and cycles of cooperation.

Bladon AJ, Galla T, McKane AJ.

Phys Rev E Stat Nonlin Soft Matter Phys. 2010 Jun;81(6 Pt 2):066122. Epub 2010 Jun 28.

PMID:
20866493
45.

Intrinsic noise in game dynamical learning.

Galla T.

Phys Rev Lett. 2009 Nov 6;103(19):198702. Epub 2009 Nov 6.

PMID:
20365961
46.

Intrinsic fluctuations in stochastic delay systems: theoretical description and application to a simple model of gene regulation.

Galla T.

Phys Rev E Stat Nonlin Soft Matter Phys. 2009 Aug;80(2 Pt 1):021909. Epub 2009 Aug 12.

PMID:
19792153
47.

Independence and interdependence in the nest-site choice by honeybee swarms: Agent-based models, analytical approaches and pattern formation.

Galla T.

J Theor Biol. 2010 Jan 7;262(1):186-96. doi: 10.1016/j.jtbi.2009.09.007. Epub 2009 Sep 15.

PMID:
19761778
48.

Limit cycles, complex Floquet multipliers, and intrinsic noise.

Boland RP, Galla T, McKane AJ.

Phys Rev E Stat Nonlin Soft Matter Phys. 2009 May;79(5 Pt 1):051131. Epub 2009 May 29.

PMID:
19518440
49.

Effects of noise and confidence thresholds in nominal and metric Axelrod dynamics of social influence.

De Sanctis L, Galla T.

Phys Rev E Stat Nonlin Soft Matter Phys. 2009 Apr;79(4 Pt 2):046108. Epub 2009 Apr 21.

PMID:
19518302
50.

Rank abundance relations in evolutionary dynamics of random replicators.

Yoshino Y, Galla T, Tokita K.

Phys Rev E Stat Nonlin Soft Matter Phys. 2008 Sep;78(3 Pt 1):031924. Epub 2008 Sep 29.

PMID:
18851082

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