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Items: 18

1.

FusorSV: an algorithm for optimally combining data from multiple structural variation detection methods.

Becker T, Lee WP, Leone J, Zhu Q, Zhang C, Liu S, Sargent J, Shanker K, Mil-Homens A, Cerveira E, Ryan M, Cha J, Navarro FCP, Galeev T, Gerstein M, Mills RE, Shin DG, Lee C, Malhotra A.

Genome Biol. 2018 Mar 20;19(1):38. doi: 10.1186/s13059-018-1404-6.

2.

Novel approaches for bioinformatic analysis of salivary RNA sequencing data for development.

Kaczor-Urbanowicz KE, Kim Y, Li F, Galeev T, Kitchen RR, Gerstein M, Koyano K, Jeong SH, Wang X, Elashoff D, Kang SY, Kim SM, Kim K, Kim S, Chia D, Xiao X, Rozowsky J, Wong DTW.

Bioinformatics. 2018 Jan 1;34(1):1-8. doi: 10.1093/bioinformatics/btx504.

PMID:
28961734
3.

Corrigendum: Diverse human extracellular RNAs are widely detected in human plasma.

Freedman JE, Gerstein M, Mick E, Rozowsky J, Levy D, Kitchen R, Das S, Shah R, Danielson K, Beaulieu L, Navarro FC, Wang Y, Galeev TR, Holman A, Kwong RY, Murthy V, Tanriverdi SE, Koupenova M, Mikhalev E, Tanriverdi K.

Nat Commun. 2016 Jun 3;7:11902. doi: 10.1038/ncomms11902. No abstract available.

4.

Diverse human extracellular RNAs are widely detected in human plasma.

Freedman JE, Gerstein M, Mick E, Rozowsky J, Levy D, Kitchen R, Das S, Shah R, Danielson K, Beaulieu L, Navarro FC, Wang Y, Galeev TR, Holman A, Kwong RY, Murthy V, Tanriverdi SE, Koupenova-Zamor M, Mikhalev E, Tanriverdi K.

Nat Commun. 2016 Apr 26;7:11106. doi: 10.1038/ncomms11106.

5.

A uniform survey of allele-specific binding and expression over 1000-Genomes-Project individuals.

Chen J, Rozowsky J, Galeev TR, Harmanci A, Kitchen R, Bedford J, Abyzov A, Kong Y, Regan L, Gerstein M.

Nat Commun. 2016 Apr 18;7:11101. doi: 10.1038/ncomms11101.

6.

Reads meet rotamers: structural biology in the age of deep sequencing.

Sethi A, Clarke D, Chen J, Kumar S, Galeev TR, Regan L, Gerstein M.

Curr Opin Struct Biol. 2015 Dec;35:125-34. doi: 10.1016/j.sbi.2015.11.003. Epub 2015 Dec 1. Review.

7.

Geometric and electronic factors in the rational design of transition-metal-centered boron molecular wheels.

Romanescu C, Galeev TR, Li WL, Boldyrev AI, Wang LS.

J Chem Phys. 2013 Apr 7;138(13):134315. doi: 10.1063/1.4798935.

PMID:
23574235
8.

Solid state adaptive natural density partitioning: a tool for deciphering multi-center bonding in periodic systems.

Galeev TR, Dunnington BD, Schmidt JR, Boldyrev AI.

Phys Chem Chem Phys. 2013 Apr 14;15(14):5022-9. doi: 10.1039/c3cp50350j.

PMID:
23443061
9.

Photoelectron spectroscopy and ab initio study of boron-carbon mixed clusters: CB9- and C2B8-.

Galeev TR, Li WL, Romanescu C, Cernusák I, Wang LS, Boldyrev AI.

J Chem Phys. 2012 Dec 21;137(23):234306. doi: 10.1063/1.4770231.

PMID:
23267485
10.

Transition-metal-centered monocyclic boron wheel clusters (M©Bn): a new class of aromatic borometallic compounds.

Romanescu C, Galeev TR, Li WL, Boldyrev AI, Wang LS.

Acc Chem Res. 2013 Feb 19;46(2):350-8. doi: 10.1021/ar300149a. Epub 2012 Dec 5.

PMID:
23210660
11.

Observation of the highest coordination number in planar species: decacoordinated Ta©B10(-) and Nb©B10(-) anions.

Galeev TR, Romanescu C, Li WL, Wang LS, Boldyrev AI.

Angew Chem Int Ed Engl. 2012 Feb 27;51(9):2101-5. doi: 10.1002/anie.201107880. Epub 2012 Feb 1. No abstract available.

PMID:
22298320
12.

Transition-metal-centered nine-membered boron rings: MⓒB9 and MⓒB9(-) (M = Rh, Ir).

Li WL, Romanescu C, Galeev TR, Piazza ZA, Boldyrev AI, Wang LS.

J Am Chem Soc. 2012 Jan 11;134(1):165-8. doi: 10.1021/ja209808k. Epub 2011 Dec 16.

PMID:
22148745
13.

Valence isoelectronic substitution in the B8(-) and B9(-) molecular wheels by an Al dopant atom: umbrella-like structures of AlB7(-) and AlB8(-).

Galeev TR, Romanescu C, Li WL, Wang LS, Boldyrev AI.

J Chem Phys. 2011 Sep 14;135(10):104301. doi: 10.1063/1.3625959.

PMID:
21932887
14.

Aromatic metal-centered monocyclic boron rings: Co©B8- and Ru©B9-.

Romanescu C, Galeev TR, Li WL, Boldyrev AI, Wang LS.

Angew Chem Int Ed Engl. 2011 Sep 26;50(40):9334-7. doi: 10.1002/anie.201104166. Epub 2011 Aug 31. No abstract available.

PMID:
21882323
15.

Planarity takes over in the C(x)H(x)P(6-x) (x = 0-6) series at x = 4.

Galeev TR, Boldyrev AI.

Phys Chem Chem Phys. 2011 Dec 14;13(46):20549-56. doi: 10.1039/c1cp21959f. Epub 2011 Aug 24.

PMID:
21869975
16.

Aluminum avoids the central position in AlB9- and AlB10-: photoelectron spectroscopy and ab initio study.

Li WL, Romanescu C, Galeev TR, Wang LS, Boldyrev AI.

J Phys Chem A. 2011 Sep 29;115(38):10391-7. doi: 10.1021/jp205873g. Epub 2011 Sep 1.

PMID:
21800920
17.

Deciphering the mystery of hexagon holes in an all-boron graphene α-sheet.

Galeev TR, Chen Q, Guo JC, Bai H, Miao CQ, Lu HG, Sergeeva AP, Li SD, Boldyrev AI.

Phys Chem Chem Phys. 2011 Jun 28;13(24):11575-8. doi: 10.1039/c1cp20439d. Epub 2011 May 20.

PMID:
21603683
18.

Molecular wheel to monocyclic ring transition in boron-carbon mixed clusters C2B6⁻ and C3B5⁻.

Galeev TR, Ivanov AS, Romanescu C, Li WL, Bozhenko KV, Wang LS, Boldyrev AI.

Phys Chem Chem Phys. 2011 May 21;13(19):8805-10. doi: 10.1039/c1cp20359b. Epub 2011 Apr 12.

PMID:
21487619

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