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Items: 1 to 50 of 110

1.

Transcriptome analysis reveals key genes involved in the regulation of nicotine biosynthesis at early time points after topping in tobacco (Nicotiana tabacum L.).

Qin Y, Bai S, Li W, Sun T, Galbraith DW, Yang Z, Zhou Y, Sun G, Wang B.

BMC Plant Biol. 2020 Jan 20;20(1):30. doi: 10.1186/s12870-020-2241-9.

2.

Guidelines for the use of flow cytometry and cell sorting in immunological studies (second edition).

Cossarizza A, Chang HD, Radbruch A, Acs A, Adam D, Adam-Klages S, Agace WW, Aghaeepour N, Akdis M, Allez M, Almeida LN, Alvisi G, Anderson G, Andrä I, Annunziato F, Anselmo A, Bacher P, Baldari CT, Bari S, Barnaba V, Barros-Martins J, Battistini L, Bauer W, Baumgart S, Baumgarth N, Baumjohann D, Baying B, Bebawy M, Becher B, Beisker W, Benes V, Beyaert R, Blanco A, Boardman DA, Bogdan C, Borger JG, Borsellino G, Boulais PE, Bradford JA, Brenner D, Brinkman RR, Brooks AES, Busch DH, Büscher M, Bushnell TP, Calzetti F, Cameron G, Cammarata I, Cao X, Cardell SL, Casola S, Cassatella MA, Cavani A, Celada A, Chatenoud L, Chattopadhyay PK, Chow S, Christakou E, Čičin-Šain L, Clerici M, Colombo FS, Cook L, Cooke A, Cooper AM, Corbett AJ, Cosma A, Cosmi L, Coulie PG, Cumano A, Cvetkovic L, Dang VD, Dang-Heine C, Davey MS, Davies D, De Biasi S, Del Zotto G, Dela Cruz GV, Delacher M, Della Bella S, Dellabona P, Deniz G, Dessing M, Di Santo JP, Diefenbach A, Dieli F, Dolf A, Dörner T, Dress RJ, Dudziak D, Dustin M, Dutertre CA, Ebner F, Eckle SBG, Edinger M, Eede P, Ehrhardt GRA, Eich M, Engel P, Engelhardt B, Erdei A, Esser C, Everts B, Evrard M, Falk CS, Fehniger TA, Felipo-Benavent M, Ferry H, Feuerer M, Filby A, Filkor K, Fillatreau S, Follo M, Förster I, Foster J, Foulds GA, Frehse B, Frenette PS, Frischbutter S, Fritzsche W, Galbraith DW, Gangaev A, Garbi N, Gaudilliere B, Gazzinelli RT, Geginat J, Gerner W, Gherardin NA, Ghoreschi K, Gibellini L, Ginhoux F, Goda K, Godfrey DI, Goettlinger C, González-Navajas JM, Goodyear CS, Gori A, Grogan JL, Grummitt D, Grützkau A, Haftmann C, Hahn J, Hammad H, Hämmerling G, Hansmann L, Hansson G, Harpur CM, Hartmann S, Hauser A, Hauser AE, Haviland DL, Hedley D, Hernández DC, Herrera G, Herrmann M, Hess C, Höfer T, Hoffmann P, Hogquist K, Holland T, Höllt T, Holmdahl R, Hombrink P, Houston JP, Hoyer BF, Huang B, Huang FP, Huber JE, Huehn J, Hundemer M, Hunter CA, Hwang WYK, Iannone A, Ingelfinger F, Ivison SM, Jäck HM, Jani PK, Jávega B, Jonjic S, Kaiser T, Kalina T, Kamradt T, Kaufmann SHE, Keller B, Ketelaars SLC, Khalilnezhad A, Khan S, Kisielow J, Klenerman P, Knopf J, Koay HF, Kobow K, Kolls JK, Kong WT, Kopf M, Korn T, Kriegsmann K, Kristyanto H, Kroneis T, Krueger A, Kühne J, Kukat C, Kunkel D, Kunze-Schumacher H, Kurosaki T, Kurts C, Kvistborg P, Kwok I, Landry J, Lantz O, Lanuti P, LaRosa F, Lehuen A, LeibundGut-Landmann S, Leipold MD, Leung LYT, Levings MK, Lino AC, Liotta F, Litwin V, Liu Y, Ljunggren HG, Lohoff M, Lombardi G, Lopez L, López-Botet M, Lovett-Racke AE, Lubberts E, Luche H, Ludewig B, Lugli E, Lunemann S, Maecker HT, Maggi L, Maguire O, Mair F, Mair KH, Mantovani A, Manz RA, Marshall AJ, Martínez-Romero A, Martrus G, Marventano I, Maslinski W, Matarese G, Mattioli AV, Maueröder C, Mazzoni A, McCluskey J, McGrath M, McGuire HM, McInnes IB, Mei HE, Melchers F, Melzer S, Mielenz D, Miller SD, Mills KHG, Minderman H, Mjösberg J, Moore J, Moran B, Moretta L, Mosmann TR, Müller S, Multhoff G, Muñoz LE, Münz C, Nakayama T, Nasi M, Neumann K, Ng LG, Niedobitek A, Nourshargh S, Núñez G, O'Connor JE, Ochel A, Oja A, Ordonez D, Orfao A, Orlowski-Oliver E, Ouyang W, Oxenius A, Palankar R, Panse I, Pattanapanyasat K, Paulsen M, Pavlinic D, Penter L, Peterson P, Peth C, Petriz J, Piancone F, Pickl WF, Piconese S, Pinti M, Pockley AG, Podolska MJ, Poon Z, Pracht K, Prinz I, Pucillo CEM, Quataert SA, Quatrini L, Quinn KM, Radbruch H, Radstake TRDJ, Rahmig S, Rahn HP, Rajwa B, Ravichandran G, Raz Y, Rebhahn JA, Recktenwald D, Reimer D, Reis E Sousa C, Remmerswaal EBM, Richter L, Rico LG, Riddell A, Rieger AM, Robinson JP, Romagnani C, Rubartelli A, Ruland J, Saalmüller A, Saeys Y, Saito T, Sakaguchi S, Sala-de-Oyanguren F, Samstag Y, Sanderson S, Sandrock I, Santoni A, Sanz RB, Saresella M, Sautes-Fridman C, Sawitzki B, Schadt L, Scheffold A, Scherer HU, Schiemann M, Schildberg FA, Schimisky E, Schlitzer A, Schlosser J, Schmid S, Schmitt S, Schober K, Schraivogel D, Schuh W, Schüler T, Schulte R, Schulz AR, Schulz SR, Scottá C, Scott-Algara D, Sester DP, Shankey TV, Silva-Santos B, Simon AK, Sitnik KM, Sozzani S, Speiser DE, Spidlen J, Stahlberg A, Stall AM, Stanley N, Stark R, Stehle C, Steinmetz T, Stockinger H, Takahama Y, Takeda K, Tan L, Tárnok A, Tiegs G, Toldi G, Tornack J, Traggiai E, Trebak M, Tree TIM, Trotter J, Trowsdale J, Tsoumakidou M, Ulrich H, Urbanczyk S, van de Veen W, van den Broek M, van der Pol E, Van Gassen S, Van Isterdael G, van Lier RAW, Veldhoen M, Vento-Asturias S, Vieira P, Voehringer D, Volk HD, von Borstel A, von Volkmann K, Waisman A, Walker RV, Wallace PK, Wang SA, Wang XM, Ward MD, Ward-Hartstonge KA, Warnatz K, Warnes G, Warth S, Waskow C, Watson JV, Watzl C, Wegener L, Weisenburger T, Wiedemann A, Wienands J, Wilharm A, Wilkinson RJ, Willimsky G, Wing JB, Winkelmann R, Winkler TH, Wirz OF, Wong A, Wurst P, Yang JHM, Yang J, Yazdanbakhsh M, Yu L, Yue A, Zhang H, Zhao Y, Ziegler SM, Zielinski C, Zimmermann J, Zychlinsky A.

Eur J Immunol. 2019 Oct;49(10):1457-1973. doi: 10.1002/eji.201970107.

PMID:
31633216
3.

The genome of Populus alba x Populus tremula var. glandulosa clone 84K.

Qiu D, Bai S, Ma J, Zhang L, Shao F, Zhang K, Yang Y, Sun T, Huang J, Zhou Y, Galbraith DW, Wang Z, Sun G.

DNA Res. 2019 Oct 1;26(5):423-431. doi: 10.1093/dnares/dsz020.

4.

BZU2/ZmMUTE controls symmetrical division of guard mother cell and specifies neighbor cell fate in maize.

Wang H, Guo S, Qiao X, Guo J, Li Z, Zhou Y, Bai S, Gao Z, Wang D, Wang P, Galbraith DW, Song CP.

PLoS Genet. 2019 Aug 29;15(8):e1008377. doi: 10.1371/journal.pgen.1008377. eCollection 2019 Aug.

5.

Optimizing Periplasmic Expression in Escherichia coli for the Production of Recombinant Proteins Tagged with the Small Metal-Binding Protein SmbP.

Santos BD, Morones-Ramirez JR, Balderas-Renteria I, Casillas-Vega NG, Galbraith DW, Zarate X.

Mol Biotechnol. 2019 Jun;61(6):451-460. doi: 10.1007/s12033-019-00176-4.

PMID:
30997666
6.

Transient induction of a subset of ethylene biosynthesis genes is potentially involved in regulation of grapevine bud dormancy release.

Shi Z, Halaly-Basha T, Zheng C, Weissberg M, Ophir R, Galbraith DW, Pang X, Or E.

Plant Mol Biol. 2018 Dec;98(6):507-523. doi: 10.1007/s11103-018-0793-y. Epub 2018 Nov 3.

PMID:
30392158
7.

A Spatiotemporal DNA Endoploidy Map of the Arabidopsis Root Reveals Roles for the Endocycle in Root Development and Stress Adaptation.

Bhosale R, Boudolf V, Cuevas F, Lu R, Eekhout T, Hu Z, Van Isterdael G, Lambert GM, Xu F, Nowack MK, Smith RS, Vercauteren I, De Rycke R, Storme V, Beeckman T, Larkin JC, Kremer A, Höfte H, Galbraith DW, Kumpf RP, Maere S, De Veylder L.

Plant Cell. 2018 Oct;30(10):2330-2351. doi: 10.1105/tpc.17.00983. Epub 2018 Aug 16.

8.

Abscisic acid catabolism enhances dormancy release of grapevine buds.

Zheng C, Acheampong AK, Shi Z, Mugzech A, Halaly-Basha T, Shaya F, Sun Y, Colova V, Mosquna A, Ophir R, Galbraith DW, Or E.

Plant Cell Environ. 2018 Oct;41(10):2490-2503. doi: 10.1111/pce.13371. Epub 2018 Jul 12.

PMID:
29907961
9.

Distinct gibberellin functions during and after grapevine bud dormancy release.

Zheng C, Kwame Acheampong A, Shi Z, Halaly T, Kamiya Y, Ophir R, Galbraith DW, Or E.

J Exp Bot. 2018 Mar 24;69(7):1635-1648. doi: 10.1093/jxb/ery022.

10.

Nuclear Cytometry: Analysis of the Patterns of DNA Synthesis and Transcription Using Flow Cytometry, Confocal Microscopy, and RNA Sequencing.

Galbraith DW, Sliwinska E, Samadder P.

Methods Mol Biol. 2018;1678:371-392. doi: 10.1007/978-1-4939-7346-0_16.

PMID:
29071687
11.

Flow cytometry and single nucleus sorting for Cre-based analysis of changes in transcriptional states.

Samadder P, Weng N, Doetschman T, Heimark RL, Galbraith DW.

Cytometry A. 2016 May;89(5):430-42. doi: 10.1002/cyto.a.22847. Epub 2016 Mar 22.

12.

Expression and purification of recombinant proteins in Escherichia coli tagged with the metal-binding protein CusF.

Cantu-Bustos JE, Vargas-Cortez T, Morones-Ramirez JR, Balderas-Renteria I, Galbraith DW, McEvoy MM, Zarate X.

Protein Expr Purif. 2016 May;121:61-5. doi: 10.1016/j.pep.2016.01.007. Epub 2016 Jan 12.

PMID:
26805756
13.

Redrawing the frontiers in the age of post-publication review.

Galbraith DW.

Front Genet. 2015 Jun 5;6:198. doi: 10.3389/fgene.2015.00198. eCollection 2015.

14.

Digital data acquisition and processing.

Naivar MA, Galbraith DW.

Curr Protoc Cytom. 2015 Jan 5;71:10.19.1-10.19.13. doi: 10.1002/0471142956.cy1019s71.

PMID:
25559220
15.

Challenges and solutions in cytometric measurements of non-mammalian species.

Galbraith DW.

Cytometry A. 2014 Oct;85(10):831-2. doi: 10.1002/cyto.a.22523. No abstract available.

16.

TOPOISOMERASE 6B is involved in chromatin remodelling associated with control of carbon partitioning into secondary metabolites and cell walls, and epidermal morphogenesis in Arabidopsis.

Mittal A, Balasubramanian R, Cao J, Singh P, Subramanian S, Hicks G, Nothnagel EA, Abidi N, Janda J, Galbraith DW, Rock CD.

J Exp Bot. 2014 Aug;65(15):4217-39. doi: 10.1093/jxb/eru198. Epub 2014 May 12.

17.

Endoreduplicative standards for calibration of flow cytometric C-Value measurements.

Galbraith DW.

Cytometry A. 2014 Apr;85(4):368-74. doi: 10.1002/cyto.a.22440. Epub 2014 Jan 10.

18.

A cell-free expression platform for production of protein microarrays.

Zárate X, Galbraith DW.

Methods Mol Biol. 2014;1118:297-307. doi: 10.1007/978-1-62703-782-2_21.

PMID:
24395426
19.

RNA-sequencing from single nuclei.

Grindberg RV, Yee-Greenbaum JL, McConnell MJ, Novotny M, O'Shaughnessy AL, Lambert GM, Araúzo-Bravo MJ, Lee J, Fishman M, Robbins GE, Lin X, Venepally P, Badger JH, Galbraith DW, Gage FH, Lasken RS.

Proc Natl Acad Sci U S A. 2013 Dec 3;110(49):19802-7. doi: 10.1073/pnas.1319700110. Epub 2013 Nov 18.

20.

Identification and characterization of a repertoire of genes differentially expressed in developing top ear shoots between a superior hybrid and its parental inbreds in Zea mays L.

Qin J, Scheuring CF, Wei G, Zhi H, Zhang M, Huang JJ, Zhou X, Galbraith DW, Zhang HB.

Mol Genet Genomics. 2013 Dec;288(12):691-705. doi: 10.1007/s00438-013-0781-5. Epub 2013 Oct 22.

PMID:
24146224
21.

Flow cytometry and sorting in Arabidopsis.

Galbraith DW.

Methods Mol Biol. 2014;1062:509-37. doi: 10.1007/978-1-62703-580-4_27.

PMID:
24057384
22.

High-throughput monitoring of plant nuclear DNA contents via flow cytometry.

Galbraith DW, Lambert GM.

Methods Mol Biol. 2012;918:311-25. doi: 10.1007/978-1-61779-995-2_16.

PMID:
22893296
23.

The genome of flax (Linum usitatissimum) assembled de novo from short shotgun sequence reads.

Wang Z, Hobson N, Galindo L, Zhu S, Shi D, McDill J, Yang L, Hawkins S, Neutelings G, Datla R, Lambert G, Galbraith DW, Grassa CJ, Geraldes A, Cronk QC, Cullis C, Dash PK, Kumar PA, Cloutier S, Sharpe AG, Wong GK, Wang J, Deyholos MK.

Plant J. 2012 Nov;72(3):461-73. doi: 10.1111/j.1365-313X.2012.05093.x. Epub 2012 Aug 14.

24.

RNA interference-mediated gene knockdown within specific cell types.

Zhang C, Galbraith DW.

Plant Mol Biol. 2012 Sep;80(2):169-76. doi: 10.1007/s11103-012-9937-7. Epub 2012 Jun 28.

PMID:
22740284
25.

Frontiers in genomic assay technologies: the grand challenges in enabling data-intensive biological research.

Galbraith DW.

Front Genet. 2011 Jun 8;2:26. doi: 10.3389/fgene.2011.00026. eCollection 2011. No abstract available.

26.

A high-density quantitative nuclease protection microarray platform for high throughput analysis of gene expression.

Bourzac KM, Rounseville MP, Zarate X, Maddula VS, Henderson DC, Luckey JA, Seligmann B, Galbraith DW.

J Biotechnol. 2011 Jun 10;154(1):68-75. doi: 10.1016/j.jbiotec.2011.03.020. Epub 2011 Apr 8.

PMID:
21504771
27.

Optimizing microarray-based in situ transcription-translation of proteins for matrix-assisted laser desorption ionization mass spectrometry.

Kimzey MJ, Zarate X, Galbraith DW, Lau SS.

Anal Biochem. 2011 Jul 15;414(2):282-6. doi: 10.1016/j.ab.2011.03.030. Epub 2011 Apr 6.

28.

Multiparametric analysis, sorting, and transcriptional profiling of plant protoplasts and nuclei according to cell type.

Galbraith DW, Janda J, Lambert GM.

Methods Mol Biol. 2011;699:407-29. doi: 10.1007/978-1-61737-950-5_20. Review.

PMID:
21116995
29.

Dissecting quantitative resistance against blast disease using heterogeneous inbred family lines in rice.

Liu Y, Zhu XY, Zhang S, Bernardo M, Edwards J, Galbraith DW, Leach J, Zhang G, Liu B, Leung H.

Theor Appl Genet. 2011 Feb;122(2):341-53. doi: 10.1007/s00122-010-1450-2. Epub 2010 Sep 25.

PMID:
20872132
30.

Genome structures and halophyte-specific gene expression of the extremophile Thellungiella parvula in comparison with Thellungiella salsuginea (Thellungiella halophila) and Arabidopsis.

Oh DH, Dassanayake M, Haas JS, Kropornika A, Wright C, d'Urzo MP, Hong H, Ali S, Hernandez A, Lambert GM, Inan G, Galbraith DW, Bressan RA, Yun DJ, Zhu JK, Cheeseman JM, Bohnert HJ.

Plant Physiol. 2010 Nov;154(3):1040-52. doi: 10.1104/pp.110.163923. Epub 2010 Sep 10.

31.

Development of high-yield autofluorescent protein microarrays using hybrid cell-free expression with combined Escherichia coli S30 and wheat germ extracts.

Zárate X, Henderson DC, Phillips KC, Lake AD, Galbraith DW.

Proteome Sci. 2010 Jun 15;8:32. doi: 10.1186/1477-5956-8-32.

32.

Profiling translatomes of discrete cell populations resolves altered cellular priorities during hypoxia in Arabidopsis.

Mustroph A, Zanetti ME, Jang CJ, Holtan HE, Repetti PP, Galbraith DW, Girke T, Bailey-Serres J.

Proc Natl Acad Sci U S A. 2009 Nov 3;106(44):18843-8. doi: 10.1073/pnas.0906131106. Epub 2009 Oct 20.

33.

Analysis of PHOTOPERIOD SENSITIVITY5 sheds light on the role of phytochromes in photoperiodic flowering in rice.

Andrés F, Galbraith DW, Talón M, Domingo C.

Plant Physiol. 2009 Oct;151(2):681-90. doi: 10.1104/pp.109.139097. Epub 2009 Aug 12.

34.

RiceArrayNet: a database for correlating gene expression from transcriptome profiling, and its application to the analysis of coexpressed genes in rice.

Lee TH, Kim YK, Pham TT, Song SI, Kim JK, Kang KY, An G, Jung KH, Galbraith DW, Kim M, Yoon UH, Nahm BH.

Plant Physiol. 2009 Sep;151(1):16-33. doi: 10.1104/pp.109.139030. Epub 2009 Jul 15.

35.
36.

Evidence for antisense transcription associated with microRNA target mRNAs in Arabidopsis.

Luo QJ, Samanta MP, Köksal F, Janda J, Galbraith DW, Richardson CR, Ou-Yang F, Rock CD.

PLoS Genet. 2009 Apr;5(4):e1000457. doi: 10.1371/journal.pgen.1000457. Epub 2009 Apr 17.

37.

Analysis of nuclear DNA content and ploidy in higher plants.

Galbraith DW, Lambert GM, Macas J, Dolezel J.

Curr Protoc Cytom. 2001 May;Chapter 7:Unit 7.6. doi: 10.1002/0471142956.cy0706s02.

PMID:
18770733
38.

Diurnal and circadian rhythms in the tomato transcriptome and their modulation by cryptochrome photoreceptors.

Facella P, Lopez L, Carbone F, Galbraith DW, Giuliano G, Perrotta G.

PLoS One. 2008 Jul 30;3(7):e2798. doi: 10.1371/journal.pone.0002798.

39.

Nanobiotechnology: silica breaks through in plants.

Galbraith DW.

Nat Nanotechnol. 2007 May;2(5):272-3. doi: 10.1038/nnano.2007.118. No abstract available.

PMID:
18654282
40.

Transcript profiling in Vitis riparia during chilling requirement fulfillment reveals coordination of gene expression patterns with optimized bud break.

Mathiason K, He D, Grimplet J, Venkateswari J, Galbraith DW, Or E, Fennell A.

Funct Integr Genomics. 2009 Feb;9(1):81-96. doi: 10.1007/s10142-008-0090-y. Epub 2008 Jul 17.

PMID:
18633655
41.

Global analysis of cell type-specific gene expression.

Galbraith DW.

Comp Funct Genomics. 2003;4(2):208-15. doi: 10.1002/cfg.281.

42.

Development and evaluation of a high-throughput, low-cost genotyping platform based on oligonucleotide microarrays in rice.

Edwards JD, Janda J, Sweeney MT, Gaikwad AB, Liu B, Leung H, Galbraith DW.

Plant Methods. 2008 May 29;4:13. doi: 10.1186/1746-4811-4-13.

43.

Global characterization of cell-specific gene expression through fluorescence-activated sorting of nuclei.

Zhang C, Barthelson RA, Lambert GM, Galbraith DW.

Plant Physiol. 2008 May;147(1):30-40. doi: 10.1104/pp.107.115246. Epub 2008 Mar 19.

44.

Plant systems biology comes of age.

Yuan JS, Galbraith DW, Dai SY, Griffin P, Stewart CN Jr.

Trends Plant Sci. 2008 Apr;13(4):165-71. doi: 10.1016/j.tplants.2008.02.003. Epub 2008 Mar 7. Review.

PMID:
18329321
45.

Comparison of the contributions of the nuclear and cytoplasmic compartments to global gene expression in human cells.

Barthelson RA, Lambert GM, Vanier C, Lynch RM, Galbraith DW.

BMC Genomics. 2007 Sep 25;8:340.

46.

Persistent infection and promiscuous recombination of multiple genotypes of an RNA virus within a single host generate extensive diversity.

Weng Z, Barthelson R, Gowda S, Hilf ME, Dawson WO, Galbraith DW, Xiong Z.

PLoS One. 2007 Sep 19;2(9):e917.

47.

High-throughput, high-sensitivity analysis of gene expression in Arabidopsis.

Kris RM, Felder S, Deyholos M, Lambert GM, Hinton J, Botros I, Martel R, Seligmann B, Galbraith DW.

Plant Physiol. 2007 Jul;144(3):1256-66. Epub 2007 May 11.

48.

DNA microarray analyses in higher plants.

Galbraith DW.

OMICS. 2006 Winter;10(4):455-73. Review.

PMID:
17233557
49.

The daunting process of MIAME.

Galbraith DW.

Nature. 2006 Nov 2;444(7115):31. No abstract available.

PMID:
17080064
50.

A framework of integrating gene relations from heterogeneous data sources: an experiment on Arabidopsis thaliana.

Li J, Li X, Su H, Chen H, Galbraith DW.

Bioinformatics. 2006 Aug 15;22(16):2037-43. Epub 2006 Jul 4.

PMID:
16820427

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