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Items: 1 to 50 of 125

1.

Reactive cholangiocytes differentiate into proliferative hepatocytes with efficient DNA repair in mice with chronic liver injury.

Manco R, Clerbaux LA, Verhulst S, Bou Nader M, Sempoux C, Ambroise J, Bearzatto B, Gala JL, Horsmans Y, van Grunsven L, Desdouets C, Leclercq I.

J Hepatol. 2019 Jun;70(6):1180-1191. doi: 10.1016/j.jhep.2019.02.003. Epub 2019 Feb 20.

PMID:
30794890
2.

Whole-genome sequences of multidrug-resistant Escherichia coli in South-Kivu Province, Democratic Republic of Congo: characterization of phylogenomic changes, virulence and resistance genes.

Irenge LM, Ambroise J, Bearzatto B, Durant JF, Chirimwami RB, Gala JL.

BMC Infect Dis. 2019 Feb 11;19(1):137. doi: 10.1186/s12879-019-3763-3.

3.

Sensitive and Specific Recombinase Polymerase Amplification Assays for Fast Screening, Detection, and Identification of Bacillus anthracis in a Field Setting.

Bentahir M, Ambroise J, Delcorps C, Pilo P, Gala JL.

Appl Environ Microbiol. 2018 May 17;84(11). pii: e00506-18. doi: 10.1128/AEM.00506-18. Print 2018 Jun 1.

4.

A large-scale field study of bacterial communities in cereal aphid populations across Morocco.

Fakhour S, Ambroise J, Renoz F, Foray V, Gala JL, Hance T.

FEMS Microbiol Ecol. 2018 Mar 1;94(3). doi: 10.1093/femsec/fiy003.

PMID:
29346623
5.

Health crises due to infectious and communicable diseases : European preparedness and response tools in an international context.

Mahy P, Collard JM, Gala JL, Herman P, Groof D, Quoilin S, Sneyers M.

J Bus Contin Emer Plan. 2017 Jun 1;10(4):353-366.

PMID:
28610647
6.

Ebola virus RNA detection on fomites in close proximity to confirmed Ebola patients; N'Zerekore, Guinea, 2015.

Palich R, Irenge LM, Barte de Sainte Fare E, Augier A, Malvy D, Gala JL.

PLoS One. 2017 May 11;12(5):e0177350. doi: 10.1371/journal.pone.0177350. eCollection 2017.

7.

TP53 mutations in p53-negative dysplastic urothelial cells from Belgian AAN patients: New evidence for aristolochic acid-induced molecular pathogenesis and carcinogenesis.

Aydin S, Ambroise J, Cosyns JP, Gala JL.

Mutat Res. 2017 Jun;818:17-26. doi: 10.1016/j.mrgentox.2017.03.003. Epub 2017 Apr 6.

PMID:
28477877
8.
9.

Favipiravir pharmacokinetics in Ebola-Infected patients of the JIKI trial reveals concentrations lower than targeted.

Nguyen TH, Guedj J, Anglaret X, Laouénan C, Madelain V, Taburet AM, Baize S, Sissoko D, Pastorino B, Rodallec A, Piorkowski G, Carazo S, Conde MN, Gala JL, Bore JA, Carbonnelle C, Jacquot F, Raoul H, Malvy D, de Lamballerie X, Mentré F; JIKI study group.

PLoS Negl Trop Dis. 2017 Feb 23;11(2):e0005389. doi: 10.1371/journal.pntd.0005389. eCollection 2017 Feb.

10.

Using a constraint-based regression method for relative quantification of somatic mutations in pyrosequencing signals: a case for NRAS analysis.

Ambroise J, Badir J, Nienhaus L, Robert A, Dekairelle AF, Gala JL.

Algorithms Mol Biol. 2016 Sep 15;11:24. doi: 10.1186/s13015-016-0086-4. eCollection 2016.

11.

Regorafenib induced severe toxic hepatitis: characterization and discussion.

Sacré A, Lanthier N, Dano H, Aydin S, Leggenhager D, Weber A, Dekairelle AF, De Cuyper A, Gala JL, Humblet Y, Sempoux C, Van den Eynde M.

Liver Int. 2016 Nov;36(11):1590-1594. doi: 10.1111/liv.13217. Epub 2016 Sep 6.

12.

Correction: Experimental Treatment with Favipiravir for Ebola Virus Disease (the JIKI Trial): A Historically Controlled, Single-Arm Proof-of-Concept Trial in Guinea.

Sissoko D, Laouenan C, Folkesson E, M'Lebing AB, Beavogui AH, Baize S, Camara AM, Maes P, Shepherd S, Danel C, Carazo S, Conde MN, Gala JL, Colin G, Savini H, Bore JA, Le Marcis F, Koundouno FR, Petitjean F, Lamah MC, Diederich S, Tounkara A, Poelart G, Berbain E, Dindart JM, Duraffour S, Lefevre A, Leno T, Peyrouset O, Irenge L, Bangoura N, Palich R, Hinzmann J, Kraus A, Barry TS, Berette S, Bongono A, Camara MS, Munoz VC, Doumbouya L, Harouna S, Kighoma PM, Koundouno FR, Lolamou R, Loua CM, Massala V, Moumouni K, Provost C, Samake N, Sekou C, Soumah A, Arnould I, Komano MS, Gustin L, Berutto C, Camara D, Camara FS, Colpaert J, Delamou L, Jansson L, Kourouma E, Loua M, Malme K, Manfrin E, Maomou A, Milinouno A, Ombelet S, Sidiboun AY, Verreckt I, Yombouno P, Bocquin A, Carbonnelle C, Carmoi T, Frange P, Mely S, Nguyen VK, Pannetier D, Taburet AM, Treluyer JM, Kolie J, Moh R, Gonzalez MC, Kuisma E, Liedigk B, Ngabo D, Rudolf M, Thom R, Kerber R, Gabriel M, Di Caro A, Wölfel R, Badir J, Bentahir M, Deccache Y, Dumont C, Durant JF, El Bakkouri K, Uwamahoro MG, Smits B, Toufik N, Van Cauwenberghe S, Ezzedine K, D'Ortenzio E, Pizarro L, Etienne A, Guedj J, Fizet A, de Sainte Fare EB, Murgue B, Tran-Minh T, Rapp C, Piguet P, Poncin M, Draguez B, Duverger TA, Barbe S, Baret G, Defourny I, Carroll M, Raoul H, Augier A, Eholie SP, Yazdanpanah Y, Levy-Marchal C, Antierrens A, Van Herp M, Günther S, de Lamballerie X, Keïta S, Mentre F, Anglaret X, Malvy D; JIKI Study Group.

PLoS Med. 2016 Apr 5;13(4):e1002009. doi: 10.1371/journal.pmed.1002009. eCollection 2016 Apr.

13.

A 6-Year-Old Child with Severe Ebola Virus Disease: Laboratory-Guided Clinical Care in an Ebola Treatment Center in Guinea.

Palich R, Gala JL, Petitjean F, Shepherd S, Peyrouset O, Abdoul BM, Kinda M, Danel C, Augier A, Anglaret X, Malvy D, Blackwell N; ALIMA N’zérékoré Ebola Treatment Center medical group.

PLoS Negl Trop Dis. 2016 Mar 24;10(3):e0004393. doi: 10.1371/journal.pntd.0004393. eCollection 2016 Mar. No abstract available.

14.

Experimental Treatment with Favipiravir for Ebola Virus Disease (the JIKI Trial): A Historically Controlled, Single-Arm Proof-of-Concept Trial in Guinea.

Sissoko D, Laouenan C, Folkesson E, M'Lebing AB, Beavogui AH, Baize S, Camara AM, Maes P, Shepherd S, Danel C, Carazo S, Conde MN, Gala JL, Colin G, Savini H, Bore JA, Le Marcis F, Koundouno FR, Petitjean F, Lamah MC, Diederich S, Tounkara A, Poelart G, Berbain E, Dindart JM, Duraffour S, Lefevre A, Leno T, Peyrouset O, Irenge L, Bangoura N, Palich R, Hinzmann J, Kraus A, Barry TS, Berette S, Bongono A, Camara MS, Chanfreau Munoz V, Doumbouya L, Souley Harouna, Kighoma PM, Koundouno FR, Réné Lolamou, Loua CM, Massala V, Moumouni K, Provost C, Samake N, Sekou C, Soumah A, Arnould I, Komano MS, Gustin L, Berutto C, Camara D, Camara FS, Colpaert J, Delamou L, Jansson L, Kourouma E, Loua M, Malme K, Manfrin E, Maomou A, Milinouno A, Ombelet S, Sidiboun AY, Verreckt I, Yombouno P, Bocquin A, Carbonnelle C, Carmoi T, Frange P, Mely S, Nguyen VK, Pannetier D, Taburet AM, Treluyer JM, Kolie J, Moh R, Gonzalez MC, Kuisma E, Liedigk B, Ngabo D, Rudolf M, Thom R, Kerber R, Gabriel M, Di Caro A, Wölfel R, Badir J, Bentahir M, Deccache Y, Dumont C, Durant JF, El Bakkouri K, Gasasira Uwamahoro M, Smits B, Toufik N, Van Cauwenberghe S, Ezzedine K, D'Ortenzio E, Pizarro L, Etienne A, Guedj J, Fizet A, Barte de Sainte Fare E, Murgue B, Tran-Minh T, Rapp C, Piguet P, Poncin M, Draguez B, Allaford Duverger T, Barbe S, Baret G, Defourny I, Carroll M, Raoul H, Augier A, Eholie SP, Yazdanpanah Y, Levy-Marchal C, Antierrens A, Van Herp M, Günther S, de Lamballerie X, Keïta S, Mentre F, Anglaret X, Malvy D; JIKI Study Group.

PLoS Med. 2016 Mar 1;13(3):e1001967. doi: 10.1371/journal.pmed.1001967. eCollection 2016 Mar. Erratum in: PLoS Med. 2016 Apr;13(4):e1002009. Dortenzio, Eric [corrected to D’Ortenzio, Eric]. PLoS Med. 2016 Jun;13(6):e1002066.

15.

Antimicrobial resistance of bacteria isolated from patients with bloodstream infections at a tertiary care hospital in the Democratic Republic of the Congo.

Irenge LM, Kabego L, Kinunu FB, Itongwa M, Mitangala PN, Gala JL, Chirimwami RB.

S Afr Med J. 2015 Sep 14;105(9):752-5. doi: 10.7196/SAMJnew.7937.

PMID:
26428974
16.

A qPCR and multiplex pyrosequencing assay combined with automated data processing for rapid and unambiguous detection of ESBL-producers Enterobacteriaceae.

Deccache Y, Irenge LM, Ambroise J, Savov E, Marinescu D, Chirimwami RB, Gala JL.

AMB Express. 2015 Dec;5(1):136. doi: 10.1186/s13568-015-0136-1. Epub 2015 Aug 12.

17.

Multiplex pyrosequencing assay using AdvISER-MH-PYRO algorithm: a case for rapid and cost-effective genotyping analysis of prostate cancer risk-associated SNPs.

Ambroise J, Butoescu V, Robert A, Tombal B, Gala JL.

BMC Med Genet. 2015 Jun 25;16:42. doi: 10.1186/s12881-015-0186-x.

18.

Heterogeneity of synovial molecular patterns in patients with arthritis.

Lauwerys BR, Hernández-Lobato D, Gramme P, Ducreux J, Dessy A, Focant I, Ambroise J, Bearzatto B, Nzeusseu Toukap A, Van den Eynde BJ, Elewaut D, Gala JL, Durez P, Houssiau FA, Helleputte T, Dupont P.

PLoS One. 2015 Apr 30;10(4):e0122104. doi: 10.1371/journal.pone.0122104. eCollection 2015.

19.

Unambiguous detection of multiple TP53 gene mutations in AAN-associated urothelial cancer in Belgium using laser capture microdissection.

Aydin S, Dekairelle AF, Ambroise J, Durant JF, Heusterspreute M, Guiot Y, Cosyns JP, Gala JL.

PLoS One. 2014 Sep 3;9(9):e106301. doi: 10.1371/journal.pone.0106301. eCollection 2014.

20.

Amplicon identification using SparsE representation of multiplex PYROsequencing signal (AdvISER-M-PYRO): application to bacterial resistance genotyping.

Ambroise J, Deccache Y, Irenge L, Savov E, Robert A, Gala JL.

Bioinformatics. 2014 Dec 15;30(24):3590-7. doi: 10.1093/bioinformatics/btu516. Epub 2014 Aug 30.

PMID:
25173420
21.

Comparative pharmacogenetic analysis of risk polymorphisms in Caucasian and Vietnamese children with acute lymphoblastic leukemia: prediction of therapeutic outcome?

Hoang PT, Ambroise J, Dekairelle AF, Durant JF, Butoescu V, Chi VL, Huynh N, Nguyen TB, Robert A, Vermylen C, Gala JL.

Br J Clin Pharmacol. 2015 Mar;79(3):429-40. doi: 10.1111/bcp.12481.

22.

Antimicrobial resistance in urinary isolates from inpatients and outpatients at a tertiary care hospital in South-Kivu Province (Democratic Republic of Congo).

Irenge LM, Kabego L, Vandenberg O, Chirimwami RB, Gala JL.

BMC Res Notes. 2014 Jun 18;7:374. doi: 10.1186/1756-0500-7-374.

23.

Simple technique for in field samples collection in the cases of skin rash illness and subsequent PCR detection of orthopoxviruses and varicella zoster virus.

Dumont C, Irenge LM, Magazani EK, Garin D, Muyembe JJ, Bentahir M, Gala JL.

PLoS One. 2014 May 19;9(5):e96930. doi: 10.1371/journal.pone.0096930. eCollection 2014.

24.

Gene expression in human ovarian tissue after xenografting.

Van Langendonckt A, Romeu L, Ambroise J, Amorim C, Bearzatto B, Gala JL, Donnez J, Dolmans MM.

Mol Hum Reprod. 2014 Jun;20(6):514-25. doi: 10.1093/molehr/gau015. Epub 2014 Feb 28.

PMID:
24586055
25.

Rapid and efficient filtration-based procedure for separation and safe analysis of CBRN mixed samples.

Bentahir M, Laduron F, Irenge L, Ambroise J, Gala JL.

PLoS One. 2014 Feb 5;9(2):e88055. doi: 10.1371/journal.pone.0088055. eCollection 2014.

26.

Comparison of long-term outcome between white and Vietnamese children treated for acute lymphoblastic leukemia according to the FRALLE 2000 protocol.

Vu Hoang PT, Ambroise J, Dang Chi VL, Dekairelle AF, Dupont S, Huynh N, Nguyen TB, Robert A, Gala JL, Vermylen C.

J Pediatr Hematol Oncol. 2014 Oct;36(7):534-40. doi: 10.1097/MPH.0000000000000062.

PMID:
24322500
27.

Does genotyping of risk-associated single nucleotide polymorphisms improve patient selection for prostate biopsy when combined with a prostate cancer risk calculator?

Butoescu V, Ambroise J, Stainier A, Dekairelle AF, Gala JL, Tombal B.

Prostate. 2014 Apr;74(4):365-71. doi: 10.1002/pros.22757. Epub 2013 Nov 22.

PMID:
24265090
28.

Is transplantation of cryopreserved ovarian tissue from patients with advanced-stage breast cancer safe? A pilot study.

Luyckx V, Durant JF, Camboni A, Gilliaux S, Amorim CA, Van Langendonckt A, Irenge LM, Gala JL, Donnez J, Dolmans MM.

J Assist Reprod Genet. 2013 Oct;30(10):1289-99. doi: 10.1007/s10815-013-0065-3. Epub 2013 Aug 29.

29.

Human umbilical cord matrix stem cells maintain multilineage differentiation abilities and do not transform during long-term culture.

Scheers I, Lombard C, Paganelli M, Campard D, Najimi M, Gala JL, Decottignies A, Sokal E.

PLoS One. 2013 Aug 9;8(8):e71374. doi: 10.1371/journal.pone.0071374. eCollection 2013.

30.

AdvISER-PYRO: Amplicon Identification using SparsE Representation of PYROsequencing signal.

Ambroise J, Piette AS, Delcorps C, Rigouts L, de Jong BC, Irenge L, Robert A, Gala JL.

Bioinformatics. 2013 Aug 15;29(16):1963-9. doi: 10.1093/bioinformatics/btt339. Epub 2013 Jun 14.

31.

A novel splice-site mutation in angiotensin I-converting enzyme (ACE) gene, c.3691+1G>A (IVS25+1G>A), causes a dramatic increase in circulating ACE through deletion of the transmembrane anchor.

Persu A, Lambert M, Deinum J, Cossu M, de Visscher N, Irenge L, Ambroise J, Minon JM, Nesterovitch AB, Churbanov A, Popova IA, Danilov SM, Danser AH, Gala JL.

PLoS One. 2013;8(4):e59537. doi: 10.1371/journal.pone.0059537. Epub 2013 Apr 1.

32.

Duplex quantitative real-time PCR assay for the detection and discrimination of the eggs of Toxocara canis and Toxocara cati (Nematoda, Ascaridoidea) in soil and fecal samples.

Durant JF, Irenge LM, Fogt-Wyrwas R, Dumont C, Doucet JP, Mignon B, Losson B, Gala JL.

Parasit Vectors. 2012 Dec 7;5:288. doi: 10.1186/1756-3305-5-288.

33.

Combining multiple laser scans of spotted microarrays by means of a two-way ANOVA model.

Ambroise J, Bearzatto B, Robert A, Macq B, Gala JL.

Stat Appl Genet Mol Biol. 2012 Feb 27;11(3):Article 8. doi: 10.1515/1544-6115.1738.

PMID:
22499702
34.

Transcriptional network inference from functional similarity and expression data: a global supervised approach.

Ambroise J, Robert A, Macq B, Gala JL.

Stat Appl Genet Mol Biol. 2012 Jan 6;11(1):Article 2. doi: 10.2202/1544-6115.1695.

PMID:
22499684
35.

Rapid detection methods for Bacillus anthracis in environmental samples: a review.

Irenge LM, Gala JL.

Appl Microbiol Biotechnol. 2012 Feb;93(4):1411-22. doi: 10.1007/s00253-011-3845-7. Epub 2012 Jan 20. Review.

PMID:
22262227
36.

Assessment of p53 functional activity in tumor cells and histologically normal mucosa from patients with head and neck squamous cell carcinoma.

Van der Vorst S, Dekairelle AF, Weynand B, Hamoir M, Gala JL.

Head Neck. 2012 Nov;34(11):1542-50. doi: 10.1002/hed.21960. Epub 2011 Nov 23.

PMID:
22109999
37.

Impact of the spotted microarray preprocessing method on fold-change compression and variance stability.

Ambroise J, Bearzatto B, Robert A, Govaerts B, Macq B, Gala JL.

BMC Bioinformatics. 2011 Oct 25;12:413. doi: 10.1186/1471-2105-12-413.

38.

Acenocoumarol sensitivity and pharmacokinetic characterization of CYP2C9 *5/*8,*8/*11,*9/*11 and VKORC1*2 in black African healthy Beninese subjects.

Allabi AC, Horsmans Y, Alvarez JC, Bigot A, Verbeeck RK, Yasar U, Gala JL.

Eur J Drug Metab Pharmacokinet. 2012 Jun;37(2):125-32. doi: 10.1007/s13318-011-0056-7. Epub 2011 Aug 3.

PMID:
21811894
39.

Limitations of extensive TPMT genotyping in the management of azathioprine-induced myelosuppression in IBD patients.

Dewit O, Moreels T, Baert F, Peeters H, Reenaers C, de Vos M, Van Hootegem P, Muls V, Veereman G, Mana F, Van Outryve M, Holvoet J, Naegels S, Piessevaux H, Horsmans Y, Gala JL; Belgian Inflammatory Bowel Disease Research Group (BIRD).

Clin Biochem. 2011 Sep;44(13):1062-1066. doi: 10.1016/j.clinbiochem.2011.06.079. Epub 2011 Jun 24.

PMID:
21723857
40.

A bias in quantitative RT-PCR limit of detection is induced by the use of cancer cell lines in the molecular detection of circulating tumor cells.

Prost à la Denise J, Dekairelle AF, Desbene C, Moutereau S, Douard R, Devanlay M, Eschwege P, Gala JL, Loric S.

Clin Chem Lab Med. 2011 Jun;49(6):1073-5. doi: 10.1515/CCLM.2011.175. No abstract available.

PMID:
21649554
41.

Identification of relevant properties for epitopes detection using a regression model.

Ambroise J, Giard J, Gala JL, Macq B.

IEEE/ACM Trans Comput Biol Bioinform. 2011 Nov-Dec;8(6):1700-7. doi: 10.1109/TCBB.2011.77.

PMID:
21519120
42.

Development of a pyrosequencing assay for rapid assessment of quinolone resistance in Acinetobacter baumannii isolates.

Deccache Y, Irenge LM, Savov E, Ariciuc M, Macovei A, Trifonova A, Gergova I, Ambroise J, Vanhoof R, Gala JL.

J Microbiol Methods. 2011 Jul;86(1):115-8. doi: 10.1016/j.mimet.2011.04.007. Epub 2011 Apr 13.

PMID:
21514328
43.

Fast surface-based travel depth estimation algorithm for macromolecule surface shape description.

Giard J, Alface PR, Gala JL, Macq B.

IEEE/ACM Trans Comput Biol Bioinform. 2011 Jan-Mar;8(1):59-68. doi: 10.1109/TCBB.2009.53.

PMID:
21071797
44.

Development and validation of a real-time quantitative PCR assay for rapid identification of Bacillus anthracis in environmental samples.

Irenge LM, Durant JF, Tomaso H, Pilo P, Olsen JS, Ramisse V, Mahillon J, Gala JL.

Appl Microbiol Biotechnol. 2010 Nov;88(5):1179-92. doi: 10.1007/s00253-010-2848-0. Epub 2010 Sep 9.

PMID:
20827474
45.

Successful long-term management of a patient with late-stage metastatic colorectal cancer treated with panitumumab.

Seront E, Marot L, Coche E, Gala JL, Sempoux C, Humblet Y.

Cancer Treat Rev. 2010 Feb;36 Suppl 1:S11-4. doi: 10.1016/S0305-7372(10)70002-5.

PMID:
20189054
46.

Regression applied to protein binding site prediction and comparison with classification.

Giard J, Ambroise J, Gala JL, Macq B.

BMC Bioinformatics. 2009 Sep 3;10:276. doi: 10.1186/1471-2105-10-276.

47.

Automated cell disruption is a reliable and effective method of isolating RNA from fresh snap-frozen normal and malignant oral mucosa samples.

Van der Vorst S, Dekairelle AF, Irenge L, Hamoir M, Robert A, Gala JL.

Clin Chem Lab Med. 2009;47(3):294-301.

PMID:
19676140
48.

Prognostic value of prostate circulating cells detection in prostate cancer patients: a prospective study.

Eschwège P, Moutereau S, Droupy S, Douard R, Gala JL, Benoit G, Conti M, Manivet P, Loric S.

Br J Cancer. 2009 Feb 24;100(4):608-10. doi: 10.1038/sj.bjc.6604912.

49.

Development and validation of a triplex real-time PCR for rapid detection and specific identification of M. avium sub sp. paratuberculosis in faecal samples.

Irenge LM, Walravens K, Govaerts M, Godfroid J, Rosseels V, Huygen K, Gala JL.

Vet Microbiol. 2009 Apr 14;136(1-2):166-72. doi: 10.1016/j.vetmic.2008.09.087. Epub 2008 Oct 21.

PMID:
19095382
50.

Amplification-based DNA analysis in the diagnosis of prosthetic joint infection.

Vandercam B, Jeumont S, Cornu O, Yombi JC, Lecouvet F, Lefèvre P, Irenge LM, Gala JL.

J Mol Diagn. 2008 Nov;10(6):537-43. doi: 10.2353/jmoldx.2008.070137. Epub 2008 Oct 2.

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