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Items: 26

1.

LARP4 mRNA codon-tRNA match contributes to LARP4 activity for ribosomal protein mRNA poly(A) tail length protection.

Mattijssen S, Arimbasseri AG, Iben JR, Gaidamakov S, Lee J, Hafner M, Maraia RJ.

Elife. 2017 Sep 12;6. pii: e28889. doi: 10.7554/eLife.28889.

2.

La Deletion from Mouse Brain Alters Pre-tRNA Metabolism and Accumulation of Pre-5.8S rRNA, with Neuron Death and Reactive Astrocytosis.

Blewett NH, Iben JR, Gaidamakov S, Maraia RJ.

Mol Cell Biol. 2017 May 2;37(10). pii: e00588-16. doi: 10.1128/MCB.00588-16. Print 2017 May 15.

3.

Targeted deletion of the gene encoding the La autoantigen (Sjögren's syndrome antigen B) in B cells or the frontal brain causes extensive tissue loss.

Gaidamakov S, Maximova OA, Chon H, Blewett NH, Wang H, Crawford AK, Day A, Tulchin N, Crouch RJ, Morse HC 3rd, Blitzer RD, Maraia RJ.

Mol Cell Biol. 2014 Jan;34(1):123-31. doi: 10.1128/MCB.01010-13. Epub 2013 Nov 4.

4.

La-related protein 4 binds poly(A), interacts with the poly(A)-binding protein MLLE domain via a variant PAM2w motif, and can promote mRNA stability.

Yang R, Gaidamakov SA, Xie J, Lee J, Martino L, Kozlov G, Crawford AK, Russo AN, Conte MR, Gehring K, Maraia RJ.

Mol Cell Biol. 2011 Feb;31(3):542-56. doi: 10.1128/MCB.01162-10. Epub 2010 Nov 22.

5.

Specific recognition of RNA/DNA hybrid and enhancement of human RNase H1 activity by HBD.

Nowotny M, Cerritelli SM, Ghirlando R, Gaidamakov SA, Crouch RJ, Yang W.

EMBO J. 2008 Apr 9;27(7):1172-81. doi: 10.1038/emboj.2008.44. Epub 2008 Mar 13.

6.

Structure of human RNase H1 complexed with an RNA/DNA hybrid: insight into HIV reverse transcription.

Nowotny M, Gaidamakov SA, Ghirlando R, Cerritelli SM, Crouch RJ, Yang W.

Mol Cell. 2007 Oct 26;28(2):264-76. Erratum in: Mol Cell. 2007 Nov 9;28(3):513.

7.

Crystal structures of RNase H bound to an RNA/DNA hybrid: substrate specificity and metal-dependent catalysis.

Nowotny M, Gaidamakov SA, Crouch RJ, Yang W.

Cell. 2005 Jul 1;121(7):1005-16.

8.

Eukaryotic RNases H1 act processively by interactions through the duplex RNA-binding domain.

Gaidamakov SA, Gorshkova II, Schuck P, Steinbach PJ, Yamada H, Crouch RJ, Cerritelli SM.

Nucleic Acids Res. 2005 Apr 14;33(7):2166-75. Print 2005.

9.

Selective inhibition of HIV-1 reverse transcriptase-associated ribonuclease H activity by hydroxylated tropolones.

Budihas SR, Gorshkova I, Gaidamakov S, Wamiru A, Bona MK, Parniak MA, Crouch RJ, McMahon JB, Beutler JA, Le Grice SF.

Nucleic Acids Res. 2005 Mar 1;33(4):1249-56. Print 2005.

10.

A capillary electrophoretic assay for ribonuclease H activity.

Chan KC, Budihas SR, Le Grice SF, Parniak MA, Crouch RJ, Gaidamakov SA, Isaaq HJ, Wamiru A, McMahon JB, Beutler JA.

Anal Biochem. 2004 Aug 15;331(2):296-302.

PMID:
15265735
11.

Selective inhibitory DNA aptamers of the human RNase H1.

Pileur F, Andreola ML, Dausse E, Michel J, Moreau S, Yamada H, Gaidamakov SA, Crouch RJ, Toulmé JJ, Cazenave C.

Nucleic Acids Res. 2003 Oct 1;31(19):5776-88.

12.

[Sensitized photomodification of DNA with binary systems of oligonucleotide conjugates. V. Effect of the structure of the target DNA. Quantitative photomodification].

Dobrikov MI, Gaĭdamakov SA, Gaĭnutdinov TI, Ivanova TM, Vlasov VV.

Bioorg Khim. 1999 Feb;25(2):137-46. Russian.

PMID:
10495903
13.

[Sensitized photomodification of DNA with binary systems of oligonucleotide conjugates. IV. Photoinduced electron transfer].

Dobrikov MI, Gaĭdamakov SA, Gaĭnutdinov TI, Tenetova ED, Shishkin GV, Vlasov VV.

Bioorg Khim. 1999 Jan;25(1):31-9. Russian.

PMID:
10234444
14.

[Sensitized photomodification of DNA with binary systems of oligonucleotide conjugates. III. Double-quantum sensitization].

Dobrikov MI, Gaĭdamakov SA, Shishkin GV, Vlasov VV.

Bioorg Khim. 1998 Nov;24(11):831-8. Russian.

PMID:
10079940
15.

[A binary system of oligonucleotide derivatives of perylene and n-azidotetrafluorobenzalhydrazone for DNA photomodification sensitized to visible light].

Dobrikov MI, Gaĭdamakov SA, Gaĭnutdinov TI, Tenetova ED, Shishkin GV, Vlasov VV.

Dokl Akad Nauk. 1998 Jan;358(3):403-7. Russian. No abstract available.

PMID:
9541790
16.

Sensitized photomodification of single-stranded DNA by a binary system of oligonucleotide conjugates.

Dobrikov MI, Gaidamakov SA, Gainutdinov TI, Koshkin AA, Vlassov VV.

Antisense Nucleic Acid Drug Dev. 1997 Aug;7(4):309-17.

PMID:
9303182
17.

[Sensitized photomodification of DNA with binary systems. II. Spectral photosensitivity. One- and two quantum sensitization].

Dobrikov MI, Gaĭdamakov SA, Koshkin AA, Luk''ianchuk NP, Shishkin GV, Vlasov VV.

Bioorg Khim. 1997 Jul;23(7):553-60. Russian.

PMID:
9471975
18.

[Sensitized photomodification by binary systems. I. Synthesis of oligonucleotide reagents, and the effect of their structure on the efficacy of target modification].

Dobrikov MI, Gaĭdamakov SA, Koshkin AA, Guĭnutdinov TI, Luk'ianchuk NP, Shishkin GV, Vlasov VV.

Bioorg Khim. 1997 Mar;23(3):191-9. Russian.

PMID:
9190790
19.

[Photomodification of DNA using a catalytic two-component system of oligonucleotides bearing benzanthracene and perfluorarylazide residues].

Dobrikov MI, Gaĭdamakov SA, Koshkin AA, Shishkin GV, Vlasov VV.

Dokl Akad Nauk. 1996 Dec;351(4):547-50. Russian. No abstract available.

PMID:
9116594
20.

[Sensitized photomodification of a DNA-target by a binary system of oligonucleotide derivatives. Singlet-singlet transfer of energy in a complementary complex].

Dobrikov MI, Gaĭdamakov SA, Koshkin AA, Vlasov VV.

Dokl Akad Nauk. 1996 Dec;351(5):687-91. Russian. No abstract available.

PMID:
9102086
21.

[Directed chemical modification of DNA fragments by perfluorarylazide derivatives of oligonucleotides in the presence of oligonucleotides bearing photosensitized pyrene groups].

Dobrikov MI, Gaĭdamakov SA, Koshkin AA, Luk'ianchuk NP, Shishkin GV, Vlasov VV.

Dokl Akad Nauk. 1995 Sep;344(1):122-5. Russian. No abstract available.

PMID:
8535260
22.

[Complementary addressed modification of plasmid DNA].

Vlasov VV, Gaĭdamakov SA, Nikonova AA, Levina AS.

Mol Biol (Mosk). 1989 Mar-Apr;23(2):556-61. Russian.

PMID:
2770731
23.

[Sequence specificity modification of double-stranded DNA with an alkylating derivative of oligodeoxyribonucleotide pT(CT)6].

Podust LM, Gaìdamakov SA, Abramova TV, Vlasov VV, Gorn VV.

Bioorg Khim. 1989 Mar;15(3):363-9. Russian.

PMID:
2742616
24.

Sequence-specific chemical modification of double-stranded DNA with alkylating oligodeoxyribonucleotide derivatives.

Vlassov VV, Gaidamakov SA, Zarytova VF, Knorre DG, Levina AS, Nikonova AA, Podust LM, Fedorova OS.

Gene. 1988 Dec 10;72(1-2):313-22.

PMID:
3149602
25.
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