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Items: 13

1.

Relative impact of indels versus SNPs on complex disease.

Gagliano SA, Sengupta S, Sidore C, Maschio A, Cucca F, Schlessinger D, Abecasis GR.

Genet Epidemiol. 2019 Feb;43(1):112-117. doi: 10.1002/gepi.22175. Epub 2018 Nov 22.

PMID:
30565766
2.

Correction to: Picomolar concentrations of oligomeric alpha-synuclein sensitizes TLR4 to play an initiating role in Parkinson's disease pathogenesis.

Hughes CD, Choi ML, Ryten M, Hopkins L, Drews A, Botía JA, Iljina M, Rodrigues M, Gagliano SA, Gandhi S, Bryant C, Klenerman D.

Acta Neuropathol. 2019 Jan;137(1):121. doi: 10.1007/s00401-018-1919-7.

PMID:
30328509
3.

Picomolar concentrations of oligomeric alpha-synuclein sensitizes TLR4 to play an initiating role in Parkinson's disease pathogenesis.

Hughes CD, Choi ML, Ryten M, Hopkins L, Drews A, Botía JA, Iljina M, Rodrigues M, Gagliano SA, Gandhi S, Bryant C, Klenerman D.

Acta Neuropathol. 2019 Jan;137(1):103-120. doi: 10.1007/s00401-018-1907-y. Epub 2018 Sep 17. Erratum in: Acta Neuropathol. 2018 Oct 17;:.

4.

Efficiently controlling for case-control imbalance and sample relatedness in large-scale genetic association studies.

Zhou W, Nielsen JB, Fritsche LG, Dey R, Gabrielsen ME, Wolford BN, LeFaive J, VandeHaar P, Gagliano SA, Gifford A, Bastarache LA, Wei WQ, Denny JC, Lin M, Hveem K, Kang HM, Abecasis GR, Willer CJ, Lee S.

Nat Genet. 2018 Sep;50(9):1335-1341. doi: 10.1038/s41588-018-0184-y. Epub 2018 Aug 13.

5.

Long- and short-term outcomes in renal allografts with deceased donors: A large recipient and donor genome-wide association study.

Hernandez-Fuentes MP, Franklin C, Rebollo-Mesa I, Mollon J, Delaney F, Perucha E, Stapleton C, Borrows R, Byrne C, Cavalleri G, Clarke B, Clatworthy M, Feehally J, Fuggle S, Gagliano SA, Griffin S, Hammad A, Higgins R, Jardine A, Keogan M, Leach T, MacPhee I, Mark PB, Marsh J, Maxwell P, McKane W, McLean A, Newstead C, Augustine T, Phelan P, Powis S, Rowe P, Sheerin N, Solomon E, Stephens H, Thuraisingham R, Trembath R, Topham P, Vaughan R, Sacks SH, Conlon P, Opelz G, Soranzo N, Weale ME, Lord GM; United Kingdom and Ireland Renal Transplant Consortium (UKIRTC) and the Wellcome Trust Case Control Consortium (WTCCC)-3.

Am J Transplant. 2018 Jun;18(6):1370-1379. doi: 10.1111/ajt.14594. Epub 2018 Feb 1.

6.

Genomics implicates adaptive and innate immunity in Alzheimer's and Parkinson's diseases.

Gagliano SA, Pouget JG, Hardy J, Knight J, Barnes MR, Ryten M, Weale ME.

Ann Clin Transl Neurol. 2016 Nov 4;3(12):924-933. doi: 10.1002/acn3.369. eCollection 2016 Dec.

7.

It's All in the Brain: A Review of Available Functional Genomic Annotations.

Gagliano SA.

Biol Psychiatry. 2017 Mar 15;81(6):478-483. doi: 10.1016/j.biopsych.2016.08.011. Epub 2016 Aug 11. Review.

PMID:
27788914
8.

Allele-Skewed DNA Modification in the Brain: Relevance to a Schizophrenia GWAS.

Gagliano SA, Ptak C, Mak DYF, Shamsi M, Oh G, Knight J, Boutros PC, Petronis A.

Am J Hum Genet. 2016 May 5;98(5):956-962. doi: 10.1016/j.ajhg.2016.03.006. Epub 2016 Apr 14.

9.

Smoking Gun or Circumstantial Evidence? Comparison of Statistical Learning Methods using Functional Annotations for Prioritizing Risk Variants.

Gagliano SA, Ravji R, Barnes MR, Weale ME, Knight J.

Sci Rep. 2015 Aug 24;5:13373. doi: 10.1038/srep13373.

10.

Assessing models for genetic prediction of complex traits: a comparison of visualization and quantitative methods.

Gagliano SA, Paterson AD, Weale ME, Knight J.

BMC Genomics. 2015 May 22;16:405. doi: 10.1186/s12864-015-1616-z.

11.

A genome-wide association study of suicide severity scores in bipolar disorder.

Zai CC, Gonçalves VF, Tiwari AK, Gagliano SA, Hosang G, de Luca V, Shaikh SA, King N, Chen Q, Xu W, Strauss J, Breen G, Lewis CM, Farmer AE, McGuffin P, Knight J, Vincent JB, Kennedy JL.

J Psychiatr Res. 2015 Jun;65:23-9. doi: 10.1016/j.jpsychires.2014.11.002. Epub 2014 Nov 20.

PMID:
25917933
12.

A Bayesian method to incorporate hundreds of functional characteristics with association evidence to improve variant prioritization.

Gagliano SA, Barnes MR, Weale ME, Knight J.

PLoS One. 2014 May 20;9(5):e98122. doi: 10.1371/journal.pone.0098122. eCollection 2014.

13.

Protein kinase cAMP-dependent regulatory type II beta (PRKAR2B) gene variants in antipsychotic-induced weight gain.

Gagliano SA, Tiwari AK, Freeman N, Lieberman JA, Meltzer HY, Kennedy JL, Knight J, Müller DJ.

Hum Psychopharmacol. 2014 Jul;29(4):330-5. doi: 10.1002/hup.2407. Epub 2014 Apr 16.

PMID:
24737441

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