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Items: 23

1.

Unlocking the Power of Big Data at the National Institutes of Health.

Coakley MF, Leerkes MR, Barnett J, Gabrielian AE, Noble K, Weber MN, Huyen Y.

Big Data. 2013 Sep;1(3):183-6. doi: 10.1089/big.2013.0012. Epub 2013 Jun 6.

2.

A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome.

Mural RJ, Adams MD, Myers EW, Smith HO, Miklos GL, Wides R, Halpern A, Li PW, Sutton GG, Nadeau J, Salzberg SL, Holt RA, Kodira CD, Lu F, Chen L, Deng Z, Evangelista CC, Gan W, Heiman TJ, Li J, Li Z, Merkulov GV, Milshina NV, Naik AK, Qi R, Shue BC, Wang A, Wang J, Wang X, Yan X, Ye J, Yooseph S, Zhao Q, Zheng L, Zhu SC, Biddick K, Bolanos R, Delcher AL, Dew IM, Fasulo D, Flanigan MJ, Huson DH, Kravitz SA, Miller JR, Mobarry CM, Reinert K, Remington KA, Zhang Q, Zheng XH, Nusskern DR, Lai Z, Lei Y, Zhong W, Yao A, Guan P, Ji RR, Gu Z, Wang ZY, Zhong F, Xiao C, Chiang CC, Yandell M, Wortman JR, Amanatides PG, Hladun SL, Pratts EC, Johnson JE, Dodson KL, Woodford KJ, Evans CA, Gropman B, Rusch DB, Venter E, Wang M, Smith TJ, Houck JT, Tompkins DE, Haynes C, Jacob D, Chin SH, Allen DR, Dahlke CE, Sanders R, Li K, Liu X, Levitsky AA, Majoros WH, Chen Q, Xia AC, Lopez JR, Donnelly MT, Newman MH, Glodek A, Kraft CL, Nodell M, Ali F, An HJ, Baldwin-Pitts D, Beeson KY, Cai S, Carnes M, Carver A, Caulk PM, Center A, Chen YH, Cheng ML, Coyne MD, Crowder M, Danaher S, Davenport LB, Desilets R, Dietz SM, Doup L, Dullaghan P, Ferriera S, Fosler CR, Gire HC, Gluecksmann A, Gocayne JD, Gray J, Hart B, Haynes J, Hoover J, Howland T, Ibegwam C, Jalali M, Johns D, Kline L, Ma DS, MacCawley S, Magoon A, Mann F, May D, McIntosh TC, Mehta S, Moy L, Moy MC, Murphy BJ, Murphy SD, Nelson KA, Nuri Z, Parker KA, Prudhomme AC, Puri VN, Qureshi H, Raley JC, Reardon MS, Regier MA, Rogers YH, Romblad DL, Schutz J, Scott JL, Scott R, Sitter CD, Smallwood M, Sprague AC, Stewart E, Strong RV, Suh E, Sylvester K, Thomas R, Tint NN, Tsonis C, Wang G, Wang G, Williams MS, Williams SM, Windsor SM, Wolfe K, Wu MM, Zaveri J, Chaturvedi K, Gabrielian AE, Ke Z, Sun J, Subramanian G, Venter JC, Pfannkoch CM, Barnstead M, Stephenson LD.

Science. 2002 May 31;296(5573):1661-71. Erratum in: Science 2002 Aug 23;297(5585):1278. Science. 2004 Mar 12;303(5664):1612.

3.

Curved DNA in promoter sequences.

Gabrielian AE, Landsman D, Bolshoy A.

In Silico Biol. 1999-2000;1(4):183-96.

PMID:
11479933
4.

The sequence of the human genome.

Venter JC, Adams MD, Myers EW, Li PW, Mural RJ, Sutton GG, Smith HO, Yandell M, Evans CA, Holt RA, Gocayne JD, Amanatides P, Ballew RM, Huson DH, Wortman JR, Zhang Q, Kodira CD, Zheng XH, Chen L, Skupski M, Subramanian G, Thomas PD, Zhang J, Gabor Miklos GL, Nelson C, Broder S, Clark AG, Nadeau J, McKusick VA, Zinder N, Levine AJ, Roberts RJ, Simon M, Slayman C, Hunkapiller M, Bolanos R, Delcher A, Dew I, Fasulo D, Flanigan M, Florea L, Halpern A, Hannenhalli S, Kravitz S, Levy S, Mobarry C, Reinert K, Remington K, Abu-Threideh J, Beasley E, Biddick K, Bonazzi V, Brandon R, Cargill M, Chandramouliswaran I, Charlab R, Chaturvedi K, Deng Z, Di Francesco V, Dunn P, Eilbeck K, Evangelista C, Gabrielian AE, Gan W, Ge W, Gong F, Gu Z, Guan P, Heiman TJ, Higgins ME, Ji RR, Ke Z, Ketchum KA, Lai Z, Lei Y, Li Z, Li J, Liang Y, Lin X, Lu F, Merkulov GV, Milshina N, Moore HM, Naik AK, Narayan VA, Neelam B, Nusskern D, Rusch DB, Salzberg S, Shao W, Shue B, Sun J, Wang Z, Wang A, Wang X, Wang J, Wei M, Wides R, Xiao C, Yan C, Yao A, Ye J, Zhan M, Zhang W, Zhang H, Zhao Q, Zheng L, Zhong F, Zhong W, Zhu S, Zhao S, Gilbert D, Baumhueter S, Spier G, Carter C, Cravchik A, Woodage T, Ali F, An H, Awe A, Baldwin D, Baden H, Barnstead M, Barrow I, Beeson K, Busam D, Carver A, Center A, Cheng ML, Curry L, Danaher S, Davenport L, Desilets R, Dietz S, Dodson K, Doup L, Ferriera S, Garg N, Gluecksmann A, Hart B, Haynes J, Haynes C, Heiner C, Hladun S, Hostin D, Houck J, Howland T, Ibegwam C, Johnson J, Kalush F, Kline L, Koduru S, Love A, Mann F, May D, McCawley S, McIntosh T, McMullen I, Moy M, Moy L, Murphy B, Nelson K, Pfannkoch C, Pratts E, Puri V, Qureshi H, Reardon M, Rodriguez R, Rogers YH, Romblad D, Ruhfel B, Scott R, Sitter C, Smallwood M, Stewart E, Strong R, Suh E, Thomas R, Tint NN, Tse S, Vech C, Wang G, Wetter J, Williams S, Williams M, Windsor S, Winn-Deen E, Wolfe K, Zaveri J, Zaveri K, Abril JF, Guigó R, Campbell MJ, Sjolander KV, Karlak B, Kejariwal A, Mi H, Lazareva B, Hatton T, Narechania A, Diemer K, Muruganujan A, Guo N, Sato S, Bafna V, Istrail S, Lippert R, Schwartz R, Walenz B, Yooseph S, Allen D, Basu A, Baxendale J, Blick L, Caminha M, Carnes-Stine J, Caulk P, Chiang YH, Coyne M, Dahlke C, Mays A, Dombroski M, Donnelly M, Ely D, Esparham S, Fosler C, Gire H, Glanowski S, Glasser K, Glodek A, Gorokhov M, Graham K, Gropman B, Harris M, Heil J, Henderson S, Hoover J, Jennings D, Jordan C, Jordan J, Kasha J, Kagan L, Kraft C, Levitsky A, Lewis M, Liu X, Lopez J, Ma D, Majoros W, McDaniel J, Murphy S, Newman M, Nguyen T, Nguyen N, Nodell M, Pan S, Peck J, Peterson M, Rowe W, Sanders R, Scott J, Simpson M, Smith T, Sprague A, Stockwell T, Turner R, Venter E, Wang M, Wen M, Wu D, Wu M, Xia A, Zandieh A, Zhu X.

Science. 2001 Feb 16;291(5507):1304-51. Erratum in: Science 2001 Jun 5;292(5523):1838.

PMID:
11181995
5.

The genome sequence of Drosophila melanogaster.

Adams MD, Celniker SE, Holt RA, Evans CA, Gocayne JD, Amanatides PG, Scherer SE, Li PW, Hoskins RA, Galle RF, George RA, Lewis SE, Richards S, Ashburner M, Henderson SN, Sutton GG, Wortman JR, Yandell MD, Zhang Q, Chen LX, Brandon RC, Rogers YH, Blazej RG, Champe M, Pfeiffer BD, Wan KH, Doyle C, Baxter EG, Helt G, Nelson CR, Gabor GL, Abril JF, Agbayani A, An HJ, Andrews-Pfannkoch C, Baldwin D, Ballew RM, Basu A, Baxendale J, Bayraktaroglu L, Beasley EM, Beeson KY, Benos PV, Berman BP, Bhandari D, Bolshakov S, Borkova D, Botchan MR, Bouck J, Brokstein P, Brottier P, Burtis KC, Busam DA, Butler H, Cadieu E, Center A, Chandra I, Cherry JM, Cawley S, Dahlke C, Davenport LB, Davies P, de Pablos B, Delcher A, Deng Z, Mays AD, Dew I, Dietz SM, Dodson K, Doup LE, Downes M, Dugan-Rocha S, Dunkov BC, Dunn P, Durbin KJ, Evangelista CC, Ferraz C, Ferriera S, Fleischmann W, Fosler C, Gabrielian AE, Garg NS, Gelbart WM, Glasser K, Glodek A, Gong F, Gorrell JH, Gu Z, Guan P, Harris M, Harris NL, Harvey D, Heiman TJ, Hernandez JR, Houck J, Hostin D, Houston KA, Howland TJ, Wei MH, Ibegwam C, Jalali M, Kalush F, Karpen GH, Ke Z, Kennison JA, Ketchum KA, Kimmel BE, Kodira CD, Kraft C, Kravitz S, Kulp D, Lai Z, Lasko P, Lei Y, Levitsky AA, Li J, Li Z, Liang Y, Lin X, Liu X, Mattei B, McIntosh TC, McLeod MP, McPherson D, Merkulov G, Milshina NV, Mobarry C, Morris J, Moshrefi A, Mount SM, Moy M, Murphy B, Murphy L, Muzny DM, Nelson DL, Nelson DR, Nelson KA, Nixon K, Nusskern DR, Pacleb JM, Palazzolo M, Pittman GS, Pan S, Pollard J, Puri V, Reese MG, Reinert K, Remington K, Saunders RD, Scheeler F, Shen H, Shue BC, Sidén-Kiamos I, Simpson M, Skupski MP, Smith T, Spier E, Spradling AC, Stapleton M, Strong R, Sun E, Svirskas R, Tector C, Turner R, Venter E, Wang AH, Wang X, Wang ZY, Wassarman DA, Weinstock GM, Weissenbach J, Williams SM, WoodageT, Worley KC, Wu D, Yang S, Yao QA, Ye J, Yeh RF, Zaveri JS, Zhan M, Zhang G, Zhao Q, Zheng L, Zheng XH, Zhong FN, Zhong W, Zhou X, Zhu S, Zhu X, Smith HO, Gibbs RA, Myers EW, Rubin GM, Venter JC.

Science. 2000 Mar 24;287(5461):2185-95.

PMID:
10731132
6.

Candidate regulatory sequence elements for cell cycle-dependent transcription in Saccharomyces cerevisiae.

Wolfsberg TG, Gabrielian AE, Campbell MJ, Cho RJ, Spouge JL, Landsman D.

Genome Res. 1999 Aug;9(8):775-92.

7.

A genome-wide transcriptional analysis of the mitotic cell cycle.

Cho RJ, Campbell MJ, Winzeler EA, Steinmetz L, Conway A, Wodicka L, Wolfsberg TG, Gabrielian AE, Landsman D, Lockhart DJ, Davis RW.

Mol Cell. 1998 Jul;2(1):65-73.

8.

Protein engineering of de novo protein with predesigned structure and activity.

Dolgikh DA, Gabrielian AE, Uversky VN, Kirpichnikov MP.

Appl Biochem Biotechnol. 1996 Oct-Nov;61(1-2):85-96.

PMID:
9100347
9.

[Biological activity of recombinant human growth hormone and its analogs].

Belousova IuV, Shul'ga AA, Gabriélian AE, Levichkin IV, Lopatin SA, Chernov BK, Zakharova IV, Kuzina NV, Mikhaĭlova LI, Moskaleva EIu, Kondratenko TIa, Severin ES, Skriabin KG, Kirpichnikov MP.

Mol Biol (Mosk). 1996 May-Jun;30(3):673-80. Russian. No abstract available.

PMID:
8754015
10.

The de novo protein with grafted biological function: transferring of interferon blast-transforming activity to albebetin.

Dolgikh DA, Uversky VN, Gabrielian AE, Chemeris VV, Federov AN, Navolotskaya EV, Zav'yalov VP, Kirpichnikov MP.

Protein Eng. 1996 Feb;9(2):195-201.

PMID:
9005441
11.

[Analysis of thermostable structural bases of bacilliary secretory metalloproteinases based on a model of chimeric enzymes].

Chumakov VN, Azimova MI, Zaĭtsev DA, Gabriélian AE, Kostrov SV.

Mol Biol (Mosk). 1995 Sep-Oct;29(5):992-1000. Russian. No abstract available.

PMID:
8538616
13.

[Use of frequency analysis for localization of functionally important regions of thermolysin].

Gabriélian AE, Kostrov SA, Kirpichnikov MP.

Mol Biol (Mosk). 1994 Sep-Oct;28(5):1044-51. Russian.

PMID:
7990826
14.

[Modeling antigenic determinants of the hepatitis A virus using synthetic peptides].

Kulik LN, Ivanov VS, Chikin LD, Berkova NP, Kozhich AT, Gabriélian AE, Ivanova VT.

Bioorg Khim. 1994 Jul;20(7):709-19. Russian.

PMID:
7527634
15.

Synthetic peptides in the determination of hepatitis A virus T-cell epitopes.

Ivanov VS, Kulik LN, Gabrielian AE, Tchikin LD, Kozhich AT, Ivanov VT.

FEBS Lett. 1994 May 30;345(2-3):159-61.

16.

[Search for T-epitopes of the hepatitis A virus using synthetic peptides].

Kulik LN, Ivanov VS, Gabriélian AE, Chikin LD, Ivanov VT.

Bioorg Khim. 1993 Dec;19(12):1169-76. Russian.

PMID:
7509604
17.

[Artificial proteins with a given spatial structure and biological activity].

Dolgikh DA, Gabriélian AE, Navolotskaia EV, Chemeris VV, Kirpichnikov MP.

Biofizika. 1993 Jan-Feb;38(1):67-74. Russian.

PMID:
8471646
18.

[Theoretical analysis of the amino acid sequence of receptors for growth hormones and prolactins. Prediction of ligand-binding segments].

Gabriélian AE, Shul'ga AA, Kirpichnikov MP.

Mol Biol (Mosk). 1992 Jul-Aug;26(4):916-26. Russian.

PMID:
1435782
19.

[The synthetic peptide 62-75 VP3 of the hepatitis A virus induces virus-binding antibodies].

Kusov IuIu, Kazachkov IuA, Dzagurov GK, Nastashenko TA, Kozhich AT, Gabrielian AE, Chikin LD, Ivanov VT, Balaian MS.

Vopr Virusol. 1991 Mar-Apr;36(2):114-7. Russian.

PMID:
1652865
20.
21.

Amino acid complementarity: testing of hypotheses.

Gabrielian AE, Heymann S.

Biomed Sci. 1990 Mar;1(3):311-3.

PMID:
2103835
22.

On searching for the active sites in proteins and peptide hormones.

Gabrielian AE, Ivanov VS, Kozhich AT.

Comput Appl Biosci. 1990 Jan;6(1):1-2.

PMID:
2310951
23.

[A method of searching for amphipathic structures in protein sequences].

Gabriélian AE, Ivanov VS, Kozhich AT.

Bioorg Khim. 1989 Jul;15(7):985-6. Russian.

PMID:
2479384

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