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Items: 11

1.

Toward a service-based workflow for automated information extraction from herbarium specimens.

Kirchhoff A, Bügel U, Santamaria E, Reimeier F, Röpert D, Tebbje A, Güntsch A, Chaves F, Steinke KH, Berendsohn W.

Database (Oxford). 2018 Jan 1;2018. doi: 10.1093/database/bay103.

2.

Data management: Stable identifiers for collection specimens.

Groom Q, Hyam R, Güntsch A.

Nature. 2017 May 31;546(7656):33. doi: 10.1038/546033d. No abstract available.

PMID:
28569808
3.

Actionable, long-term stable and semantic web compatible identifiers for access to biological collection objects.

Güntsch A, Hyam R, Hagedorn G, Chagnoux S, Röpert D, Casino A, Droege G, Glöckler F, Gödderz K, Groom Q, Hoffmann J, Holleman A, Kempa M, Koivula H, Marhold K, Nicolson N, Smith VS, Triebel D.

Database (Oxford). 2017 Jan 1;2017(1). doi: 10.1093/database/bax003.

4.

BioVeL: a virtual laboratory for data analysis and modelling in biodiversity science and ecology.

Hardisty AR, Bacall F, Beard N, Balcázar-Vargas MP, Balech B, Barcza Z, Bourlat SJ, De Giovanni R, de Jong Y, De Leo F, Dobor L, Donvito G, Fellows D, Guerra AF, Ferreira N, Fetyukova Y, Fosso B, Giddy J, Goble C, Güntsch A, Haines R, Ernst VH, Hettling H, Hidy D, Horváth F, Ittzés D, Ittzés P, Jones A, Kottmann R, Kulawik R, Leidenberger S, Lyytikäinen-Saarenmaa P, Mathew C, Morrison N, Nenadic A, de la Hidalga AN, Obst M, Oostermeijer G, Paymal E, Pesole G, Pinto S, Poigné A, Fernandez FQ, Santamaria M, Saarenmaa H, Sipos G, Sylla KH, Tähtinen M, Vicario S, Vos RA, Williams AR, Yilmaz P.

BMC Ecol. 2016 Oct 20;16(1):49.

5.

B-HIT - A Tool for Harvesting and Indexing Biodiversity Data.

Kelbert P, Droege G, Barker K, Braak K, Cawsey EM, Coddington J, Robertson T, Whitacre J, Güntsch A.

PLoS One. 2015 Nov 6;10(11):e0142240. doi: 10.1371/journal.pone.0142240. eCollection 2015.

6.

PESI - a taxonomic backbone for Europe.

de Jong Y, Kouwenberg J, Boumans L, Hussey C, Hyam R, Nicolson N, Kirk P, Paton A, Michel E, Guiry MD, Boegh PS, Pedersen HÆ, Enghoff H, von Raab-Straube E, Güntsch A, Geoffroy M, Müller A, Kohlbecker A, Berendsohn W, Appeltans W, Arvanitidis C, Vanhoorne B, Declerck J, Vandepitte L, Hernandez F, Nash R, Costello MJ, Ouvrard D, Bezard-Falgas P, Bourgoin T, Wetzel FT, Glöckler F, Korb G, Ring C, Hagedorn G, Häuser C, Aktaç N, Asan A, Ardelean A, Borges PA, Dhora D, Khachatryan H, Malicky M, Ibrahimov S, Tuzikov A, De Wever A, Moncheva S, Spassov N, Chobot K, Popov A, Boršić I, Sfenthourakis S, Kõljalg U, Uotila P, Olivier G, Dauvin JC, Tarkhnishvili D, Chaladze G, Tuerkay M, Legakis A, Peregovits L, Gudmundsson G, Ólafsson E, Lysaght L, Galil BS, Raimondo FM, Domina G, Stoch F, Minelli A, Spungis V, Budrys E, Olenin S, Turpel A, Walisch T, Krpach V, Gambin MT, Ungureanu L, Karaman G, Kleukers RM, Stur E, Aagaard K, Valland N, Moen TL, Bogdanowicz W, Tykarski P, Węsławski JM, Kędra M, M de Frias Martins A, Abreu AD, Silva R, Medvedev S, Ryss A, Šimić S, Marhold K, Stloukal E, Tome D, Ramos MA, Valdés B, Pina F, Kullander S, Telenius A, Gonseth Y, Tschudin P, Sergeyeva O, Vladymyrov V, Rizun VB, Raper C, Lear D, Stoev P, Penev L, Rubio AC, Backeljau T, Saarenmaa H, Ulenberg S.

Biodivers Data J. 2015 Sep 28;(3):e5848. doi: 10.3897/BDJ.3.e5848. eCollection 2015.

7.

Sample data processing in an additive and reproducible taxonomic workflow by using character data persistently linked to preserved individual specimens.

Kilian N, Henning T, Plitzner P, Müller A, Güntsch A, Stöver BC, Müller KF, Berendsohn WG, Borsch T.

Database (Oxford). 2015 Sep 30;2015. pii: bav094. doi: 10.1093/database/bav094. Print 2015. Review.

8.

A semi-automated workflow for biodiversity data retrieval, cleaning, and quality control.

Mathew C, Güntsch A, Obst M, Vicario S, Haines R, Williams AR, de Jong Y, Goble C.

Biodivers Data J. 2014 Dec 11;(2):e4221. doi: 10.3897/BDJ.2.e4221. eCollection 2014.

9.

Fauna Europaea - all European animal species on the web.

de Jong Y, Verbeek M, Michelsen V, Bjørn Pde P, Los W, Steeman F, Bailly N, Basire C, Chylarecki P, Stloukal E, Hagedorn G, Wetzel FT, Glöckler F, Kroupa A, Korb G, Hoffmann A, Häuser C, Kohlbecker A, Müller A, Güntsch A, Stoev P, Penev L.

Biodivers Data J. 2014 Sep 17;(2):e4034. doi: 10.3897/BDJ.2.e4034. eCollection 2014.

10.

OpenUp! Creating a cross-domain pipeline for natural history data.

Berendsohn WG, Güntsch A.

Zookeys. 2012;(209):47-54. doi: 10.3897/zookeys.209.3179. Epub 2012 Jul 20.

11.

The DNA bank network: the start from a german initiative.

Gemeinholzer B, Dröge G, Zetzsche H, Haszprunar G, Klenk HP, Güntsch A, Berendsohn WG, Wägele JW.

Biopreserv Biobank. 2011 Mar;9(1):51-5. doi: 10.1089/bio.2010.0029.

PMID:
24850206

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