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Items: 49

1.

Proteomic fingerprinting for the fast and accurate identification of species in the Polyporoid and Hymenochaetoid fungi clades.

Tomé LMR, Badotti F, Assis GBN, Fonseca PLC, da Silva GA, da Silveira RMB, Costa-Rezende DH, Dos Santos ERD, de Carvalho Azevedo VA, Figueiredo HCP, Góes-Neto A.

J Proteomics. 2019 May 23;203:103390. doi: 10.1016/j.jprot.2019.103390. [Epub ahead of print]

PMID:
31129267
2.

Biotechnological approaches for cocoa waste management: A review.

Vásquez ZS, de Carvalho Neto DP, Pereira GVM, Vandenberghe LPS, de Oliveira PZ, Tiburcio PB, Rogez HLG, Góes Neto A, Soccol CR.

Waste Manag. 2019 May 1;90:72-83. doi: 10.1016/j.wasman.2019.04.030. Epub 2019 Apr 24. Review.

PMID:
31088675
3.

Reverse transcriptase droplet digital PCR to identify the emerging vesicular virus Senecavirus A in biological samples.

Pinheiro-de-Oliveira TF, Fonseca-Júnior AA, Camargos MF, Laguardia-Nascimento M, Giannattasio-Ferraz S, Cottorello ACP, de Oliveira AM, Góes-Neto A, Barbosa-Stancioli EF.

Transbound Emerg Dis. 2019 May;66(3):1360-1369. doi: 10.1111/tbed.13168. Epub 2019 Apr 1.

PMID:
30864242
4.

Virome analyses of Hevea brasiliensis using small RNA deep sequencing and PCR techniques reveal the presence of a potential new virus.

Fonseca PLC, Badotti F, de Oliveira TFP, Fonseca A, Vaz ABM, Tomé LMR, Abrahão JS, Marques JT, Trindade GS, Chaverri P, Aguiar ERGR, Góes-Neto A.

Virol J. 2018 Nov 26;15(1):184. doi: 10.1186/s12985-018-1095-3.

5.

Rapidly evolving changes and gene loss associated with host switching in Corynebacterium pseudotuberculosis.

Viana MVC, Sahm A, Góes Neto A, Figueiredo HCP, Wattam AR, Azevedo V.

PLoS One. 2018 Nov 12;13(11):e0207304. doi: 10.1371/journal.pone.0207304. eCollection 2018.

6.

A multiscale study of fungal endophyte communities of the foliar endosphere of native rubber trees in Eastern Amazon.

Vaz ABM, Fonseca PLC, Badotti F, Skaltsas D, Tomé LMR, Silva AC, Cunha MC, Soares MA, Santos VL, Oliveira G, Chaverri P, Góes-Neto A.

Sci Rep. 2018 Nov 1;8(1):16151. doi: 10.1038/s41598-018-34619-w.

7.

Gut microbiome modulation during treatment of mucositis with the dairy bacterium Lactococcus lactis and recombinant strain secreting human antimicrobial PAP.

Carvalho R, Vaz A, Pereira FL, Dorella F, Aguiar E, Chatel JM, Bermudez L, Langella P, Fernandes G, Figueiredo H, Goes-Neto A, Azevedo V.

Sci Rep. 2018 Oct 10;8(1):15072. doi: 10.1038/s41598-018-33469-w.

8.

Comparative mangrove metagenome reveals global prevalence of heavy metals and antibiotic resistome across different ecosystems.

Imchen M, Kumavath R, Barh D, Vaz A, Góes-Neto A, Tiwari S, Ghosh P, Wattam AR, Azevedo V.

Sci Rep. 2018 Jul 25;8(1):11187. doi: 10.1038/s41598-018-29521-4.

9.

Development of a droplet digital RT-PCR for the quantification of foot-and-mouth virus RNA.

Pinheiro-de-Oliveira TF, Fonseca AA Jr, Camargos MF, Laguardia-Nascimento M, de Oliveira AM, Cottorello ACP, Goes-Neto A, Barbosa-Stancioli EF.

J Virol Methods. 2018 Sep;259:129-134. doi: 10.1016/j.jviromet.2018.06.015. Epub 2018 Jun 26.

PMID:
29958921
10.

Putting the Mess in Order: Aspergillus welwitschiae (and Not A. niger) Is the Etiological Agent of Sisal Bole Rot Disease in Brazil.

Duarte EAA, Damasceno CL, de Oliveira TAS, Barbosa LO, Martins FM, de Queiroz Silva JR, de Lima TEF, da Silva RM, Kato RB, Bortolini DE, Azevedo V, Góes-Neto A, Soares ACF.

Front Microbiol. 2018 Jun 11;9:1227. doi: 10.3389/fmicb.2018.01227. eCollection 2018.

11.

Draft genome sequence of Trametes villosa (Sw.) Kreisel CCMB561, a tropical white-rot Basidiomycota from the semiarid region of Brazil.

Ferreira DSS, Kato RB, Miranda FM, da Costa Pinheiro K, Fonseca PLC, Tomé LMR, Vaz ABM, Badotti F, Ramos RTJ, Brenig B, Azevedo VAC, Benevides RG, Góes-Neto A.

Data Brief. 2018 Apr 25;18:1581-1587. doi: 10.1016/j.dib.2018.04.074. eCollection 2018 Jun.

12.

Scheffersomyces stambukii f.a., sp. nov., a d-xylose-fermenting species isolated from rotting wood.

Lopes MR, Batista TM, Franco GR, Ribeiro LR, Santos ARO, Furtado C, Moreira RG, Goes-Neto A, Vital MJS, Rosa LH, Lachance MA, Rosa CA.

Int J Syst Evol Microbiol. 2018 Jul;68(7):2306-2312. doi: 10.1099/ijsem.0.002834. Epub 2018 May 22.

PMID:
29786499
13.

Morphological reassessment and molecular phylogenetic analyses of Amauroderma s.lat. raised new perspectives in the generic classification of the Ganodermataceae family.

Costa-Rezende DH, Robledo GL, Góes-Neto A, Reck MA, Crespo E, Drechsler-Santos ER.

Persoonia. 2017 Dec;39:254-269. doi: 10.3767/persoonia.2017.39.10. Epub 2017 Sep 21.

14.

Cell Division in genus Corynebacterium: protein-protein interaction and molecular docking of SepF and FtsZ in the understanding of cytokinesis in pathogenic species.

Oliveira AF Jr, Folador EL, Gomide ACP, Goes-Neto A, Azevedo VAC, Wattam AR.

An Acad Bras Cienc. 2018 Aug;90(2 suppl 1):2179-2188. doi: 10.1590/0001-3765201820170385. Epub 2018 Feb 15.

15.

Comparison of complex networks and tree-based methods of phylogenetic analysis and proposal of a bootstrap method.

Góes-Neto A, Diniz MVC, Carvalho DS, Bomfim GC, Duarte AA, Brzozowski JA, Petit Lobão TC, Pinho STR, El-Hani CN, Andrade RFS.

PeerJ. 2018 Feb 9;6:e4349. doi: 10.7717/peerj.4349. eCollection 2018.

16.

Decrypting the Polyporus dictyopus complex: Recovery of Atroporus Ryvarden and segregation of Neodictyopus gen. nov. (Polyporales, Basidiomyocta).

Palacio M, Robledo GL, Reck MA, Grassi E, Góes-Neto A, Drechsler-Santos ER.

PLoS One. 2017 Oct 19;12(10):e0186183. doi: 10.1371/journal.pone.0186183. eCollection 2017.

17.

Description of Hyphopichia buzzinii f.a., sp. nov. and Hyphopichia homilentoma comb. nov., the teleomorph of Candida homilentoma.

Ribeiro LR, Santos ARO, Groenewald M, Smith MTH, Lara CA, Góes-Neto A, Jacques N, Grondin C, Casaregola S, Lachance MA, Rosa CA.

Antonie Van Leeuwenhoek. 2017 Jul;110(7):985-994. doi: 10.1007/s10482-017-0870-2. Epub 2017 Apr 6.

PMID:
28386802
18.

Effectiveness of ITS and sub-regions as DNA barcode markers for the identification of Basidiomycota (Fungi).

Badotti F, de Oliveira FS, Garcia CF, Vaz AB, Fonseca PL, Nahum LA, Oliveira G, Góes-Neto A.

BMC Microbiol. 2017 Feb 23;17(1):42. doi: 10.1186/s12866-017-0958-x.

19.

Production of Basidiomata and Ligninolytic Enzymes by the Lingzhi or Reishi Medicinal Mushroom, Ganoderma lucidum (Agaricomycetes), in Licuri (Syagrus coronata) Wastes in Brazil.

de Menezes TA, Bispo AS, Koblitz MG, Vandenberghe LP, Kamida HM, Goes-Neto A.

Int J Med Mushrooms. 2016;18(12):1141-1149. doi: 10.1615/IntJMedMushrooms.v18.i12.90.

PMID:
28094752
20.

Trametes villosa Lignin Peroxidase (TvLiP): Genetic and Molecular Characterization.

de Oliveira Carneiro RT, Lopes MA, Silva MLC, Santos VDS, de Souza VB, de Sousa AO, Pirovani CP, Koblitz MGB, Benevides RG, Góes-Neto A.

J Microbiol Biotechnol. 2017 Jan 28;27(1):179-188. doi: 10.4014/jmb.1606.06055.

21.

Virtual screening reveals a viral-like polymerase inhibitor that complexes with the DNA polymerase of Moniliophthora perniciosa.

Andrade BS, Souza CS, Santos G, Góes-Neto A.

Genet Mol Res. 2016 May 23;15(2). doi: 10.4238/gmr.15028190.

22.

Antioxidant Activity and Cytotoxicity Effect of Cocoa Beans Subjected to Different Processing Conditions in Human Lung Carcinoma Cells.

Bauer D, de Abreu JP, Oliveira HS, Goes-Neto A, Koblitz MG, Teodoro AJ.

Oxid Med Cell Longev. 2016;2016:7428515. doi: 10.1155/2016/7428515. Epub 2016 Mar 13.

23.

Mycelial development preceding basidioma formation in Moniliophthora perniciosa is associated to chitin, sugar and nutrient metabolism alterations involving autophagy.

Gomes DS, Lopes MA, Menezes SP, Ribeiro LF, Dias CV, Andrade BS, de Jesus RM, Pires ABL, Goes-Neto A, Micheli F.

Fungal Genet Biol. 2016 Jan;86:33-46. doi: 10.1016/j.fgb.2015.12.008. Epub 2015 Dec 14.

24.

Phylogenetic analysis of DNA and RNA polymerases from a Moniliophthora perniciosa mitochondrial plasmid reveals probable lateral gene transfer.

Andrade BS, Góes-Neto A.

Genet Mol Res. 2015 Oct 30;14(4):14105-14. doi: 10.4238/2015.October.29.30.

25.

What are the Evolutionary Origins of Mitochondria? A Complex Network Approach.

Carvalho DS, Andrade RF, Pinho ST, Góes-Neto A, Lobão TC, Bomfim GC, El-Hani CN.

PLoS One. 2015 Sep 2;10(9):e0134988. doi: 10.1371/journal.pone.0134988. eCollection 2015.

26.

Analysis of the ergosterol biosynthesis pathway cloning, molecular characterization and phylogeny of lanosterol 14 α-demethylase (ERG11) gene of Moniliophthora perniciosa.

de Oliveira Ceita G, Vilas-Boas LA, Castilho MS, Carazzolle MF, Pirovani CP, Selbach-Schnadelbach A, Gramacho KP, Ramos PI, Barbosa LV, Pereira GA, Góes-Neto A.

Genet Mol Biol. 2014 Oct;37(4):683-93. doi: 10.1590/S1415-47572014005000017. Epub 2014 Nov 3.

27.

Lytic enzyme production optimization using low-cost substrates and its application in the clarification of xanthan gum culture broth.

da Silva CR, Silva ML, Kamida HM, Goes-Neto A, Koblitz MG.

Food Sci Nutr. 2014 Jul;2(4):299-307. doi: 10.1002/fsn3.87. Epub 2014 Apr 25.

28.

Fungal endophytes associated with three South American Myrtae (Myrtaceae) exhibit preferences in the colonization at leaf level.

Vaz AB, da Costa AG, Raad LV, Góes-Neto A.

Fungal Biol. 2014 Mar;118(3):277-86. doi: 10.1016/j.funbio.2013.11.010. Epub 2013 Dec 3.

PMID:
24607351
29.

Brazilian Microbiome Project: revealing the unexplored microbial diversity--challenges and prospects.

Pylro VS, Roesch LF, Ortega JM, do Amaral AM, Tótola MR, Hirsch PR, Rosado AS, Góes-Neto A, da Costa da Silva AL, Rosa CA, Morais DK, Andreote FD, Duarte GF, de Melo IS, Seldin L, Lambais MR, Hungria M, Peixoto RS, Kruger RH, Tsai SM, Azevedo V; Brazilian Microbiome Project Organization Committee.

Microb Ecol. 2014 Feb;67(2):237-41. doi: 10.1007/s00248-013-0302-4. Epub 2013 Oct 31.

PMID:
24173537
30.

DNA and RNA polymerase activity in a Moniliophthora perniciosa mitochondrial plasmid and self-defense against oxidative stress.

Andrade BS, Villela-Dias C, Gomes DS, Micheli F, Góes-Neto A.

Genet Mol Res. 2013 Jun 13;12(2):1944-50. doi: 10.4238/2013.June.13.3.

31.

Structure-based drug design studies of UDP-N-acetylglucosamine pyrophosphosrylase, a key enzyme for the control of witches' broom disease.

Junior MC, de Assis SA, Góes-Neto A, Duarte AA, Alves RJ, Junior MC, Taranto AG.

Chem Cent J. 2013 Mar 5;7(1):48. doi: 10.1186/1752-153X-7-48.

32.
33.

Evaluation of in vitro and in vivo effects of semipurified proteinase inhibitors from Theobroma seeds on midgut protease activity of Lepidopteran pest insects.

Paulillo LC, Sebbenn AM, de Carvalho Derbyshire MT, Góes-Neto A, de Paula Brotto MA, Figueira A.

Arch Insect Biochem Physiol. 2012 Sep;81(1):34-52. doi: 10.1002/arch.21038. Epub 2012 Jul 16.

PMID:
22806759
34.

Purification, characterization and structural determination of chitinases produced by Moniliophthora perniciosa.

Galante RS, Taranto AG, Koblitz MG, Góes-Neto A, Pirovani CP, Cascardo JC, Cruz SH, Pereira GA, Assis SA.

An Acad Bras Cienc. 2012 Jun;84(2):469-86.

35.

Production, characterization and application of inulinase from fungal endophyte CCMB 328.

Nascimento DS, Valasques Junior G, Fernandes P, Ribeiro GC, Lima DM, Góes-Neto A, Oliveira RQ, Figueiredo-Ribeiro Rde C, Assis SA.

An Acad Bras Cienc. 2012 Jun;84(2):443-54. Epub 2012 May 24.

36.

Improving chocolate flavor in poor-quality cocoa almonds by enzymatic treatment.

Oliveira HS, Mamede ME, Góes-Neto A, Koblitz MG.

J Food Sci. 2011 Jun-Jul;76(5):C755-9. doi: 10.1111/j.1750-3841.2011.02168.x. Epub 2011 May 9.

PMID:
22417423
37.

Production, purification and characterization of a thermostable β-1,3-glucanase produced by Moniliophthora perniciosa.

Sena AR, Júnior GL, Góes Neto A, Taranto AG, Pirovani CP, Cascardo JC, Zingali RB, Bezerra MA, Assis SA.

An Acad Bras Cienc. 2011 Jun;83(2):599-609. Epub 2011 May 27.

38.

Detecting network communities: an application to phylogenetic analysis.

Andrade RF, Rocha-Neto IC, Santos LB, de Santana CN, Diniz MV, Lobão TP, Goés-Neto A, Pinho ST, El-Hani CN.

PLoS Comput Biol. 2011 May;7(5):e1001131. doi: 10.1371/journal.pcbi.1001131. Epub 2011 May 5.

39.

Comparative protein analysis of the chitin metabolic pathway in extant organisms: a complex network approach.

Góes-Neto A, Diniz MV, Santos LB, Pinho ST, Miranda JG, Lobao TP, Borges EP, El-Hani CN, Andrade RF.

Biosystems. 2010 Jul;101(1):59-66. doi: 10.1016/j.biosystems.2010.04.006. Epub 2010 Apr 24.

PMID:
20420881
40.

Identification and characterization of a class III chitin synthase gene of Moniliophthora perniciosa, the fungus that causes witches' broom disease of cacao.

Souza CS, Oliveira BM, Costa GG, Schriefer A, Selbach-Schnadelbach A, Uetanabaro AP, Pirovani CP, Pereira GA, Taranto AG, Cascardo JC, Góes-Neto A.

J Microbiol. 2009 Aug;47(4):431-40. doi: 10.1007/s12275-008-0166-3. Epub 2009 Sep 9.

PMID:
19763417
41.

Comparative modeling of DNA and RNA polymerases from Moniliophthora perniciosa mitochondrial plasmid.

Andrade BS, Taranto AG, Góes-Neto A, Duarte AA.

Theor Biol Med Model. 2009 Sep 10;6:22. doi: 10.1186/1742-4682-6-22.

42.

Early development of Moniliophthora perniciosa basidiomata and developmentally regulated genes.

Pires AB, Gramacho KP, Silva DC, Góes-Neto A, Silva MM, Muniz-Sobrinho JS, Porto RF, Villela-Dias C, Brendel M, Cascardo JC, Pereira GA.

BMC Microbiol. 2009 Aug 4;9:158. doi: 10.1186/1471-2180-9-158.

43.

Geographic clustering of leishmaniasis in northeastern Brazil.

Schriefer A, Guimarães LH, Machado PR, Lessa M, Lessa HA, Lago E, Ritt G, Góes-Neto A, Schriefer AL, Riley LW, Carvalho EM.

Emerg Infect Dis. 2009 Jun;15(6):871-6. doi: 10.3201/eid1506.080406.

44.

Thermostable inulinases secreted by yeast and yeast-like strains from the Brazilian semi-arid region.

Lima DM, Oliveira RQ, Uetanabaro AP, Góes-Neto A, Rosa CA, Assis SA.

Int J Food Sci Nutr. 2009;60 Suppl 7:63-71. doi: 10.1080/09637480802524187. Epub 2009 Apr 7.

PMID:
19353366
45.

Homology modelling of pyrophosphosrylase, enzyme involved in chitin pathway of Moniliophthora perniciosa.

dos Santos MC Jr, Taranto AG, de Assis SA, Goes-Neto A.

Int J Bioinform Res Appl. 2009;5(2):133-53.

PMID:
19324600
46.

The mitochondrial genome of the phytopathogenic basidiomycete Moniliophthora perniciosa is 109 kb in size and contains a stable integrated plasmid.

Formighieri EF, Tiburcio RA, Armas ED, Medrano FJ, Shimo H, Carels N, Góes-Neto A, Cotomacci C, Carazzolle MF, Sardinha-Pinto N, Thomazella DP, Rincones J, Digiampietri L, Carraro DM, Azeredo-Espin AM, Reis SF, Deckmann AC, Gramacho K, Gonçalves MS, Moura Neto JP, Barbosa LV, Meinhardt LW, Cascardo JC, Pereira GA.

Mycol Res. 2008 Oct;112(Pt 10):1136-52. doi: 10.1016/j.mycres.2008.04.014. Epub 2008 May 11.

PMID:
18786820
47.

Use of response surface methodology to examine chitinase regulation in the basidiomycete Moniliophthora perniciosa.

Lopes MA, Gomes DS, Koblitz MG, Pirovani CP, Cascardo JC, Góes-Neto A, Micheli F.

Mycol Res. 2008 Mar;112(Pt 3):399-406. doi: 10.1016/j.mycres.2007.10.017. Epub 2007 Nov 12.

PMID:
18308529
48.

Comparative genomics of two Leptospira interrogans serovars reveals novel insights into physiology and pathogenesis.

Nascimento AL, Ko AI, Martins EA, Monteiro-Vitorello CB, Ho PL, Haake DA, Verjovski-Almeida S, Hartskeerl RA, Marques MV, Oliveira MC, Menck CF, Leite LC, Carrer H, Coutinho LL, Degrave WM, Dellagostin OA, El-Dorry H, Ferro ES, Ferro MI, Furlan LR, Gamberini M, Giglioti EA, Góes-Neto A, Goldman GH, Goldman MH, Harakava R, Jerônimo SM, Junqueira-de-Azevedo IL, Kimura ET, Kuramae EE, Lemos EG, Lemos MV, Marino CL, Nunes LR, de Oliveira RC, Pereira GG, Reis MS, Schriefer A, Siqueira WJ, Sommer P, Tsai SM, Simpson AJ, Ferro JA, Camargo LE, Kitajima JP, Setubal JC, Van Sluys MA.

J Bacteriol. 2004 Apr;186(7):2164-72.

49.

Multiclonal Leishmania braziliensis population structure and its clinical implication in a region of endemicity for American tegumentary leishmaniasis.

Schriefer A, Schriefer AL, Góes-Neto A, Guimarães LH, Carvalho LP, Almeida RP, Machado PR, Lessa HA, de Jesus AR, Riley LW, Carvalho EM.

Infect Immun. 2004 Jan;72(1):508-14.

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