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Vacuolar-type ATPase: A proton pump to lysosomal trafficking.

Futai M, Sun-Wada GH, Wada Y, Matsumoto N, Nakanishi-Matsui M.

Proc Jpn Acad Ser B Phys Biol Sci. 2019;95(6):261-277. doi: 10.2183/pjab.95.018.


The carboxyl-terminal helical domain of the ATP synthase γ subunit is involved in ε subunit conformation and energy coupling.

Yamakita A, Liu Y, Futai M, Iwamoto-Kihara A.

Biochim Biophys Acta Bioenerg. 2019 May 1;1860(5):361-368. doi: 10.1016/j.bbabio.2019.03.002. Epub 2019 Mar 12.


Essential Role of the a3 Isoform of V-ATPase in Secretory Lysosome Trafficking via Rab7 Recruitment.

Matsumoto N, Sekiya M, Tohyama K, Ishiyama-Matsuura E, Sun-Wada GH, Wada Y, Futai M, Nakanishi-Matsui M.

Sci Rep. 2018 Apr 30;8(1):6701. doi: 10.1038/s41598-018-24918-7.


Porphyromonas gingivalis is highly sensitive to inhibitors of a proton-pumping ATPase.

Sekiya M, Shimoyama Y, Ishikawa T, Sasaki M, Futai M, Nakanishi-Matsui M.

Biochem Biophys Res Commun. 2018 Apr 15;498(4):837-841. doi: 10.1016/j.bbrc.2018.03.066. Epub 2018 Mar 13.


Role of α/β interface in F1 ATPase rotational catalysis probed by inhibitors and mutations.

Sekiya M, Sakamoto Y, Futai M, Nakanishi-Matsui M.

Int J Biol Macromol. 2017 Jun;99:615-621. doi: 10.1016/j.ijbiomac.2017.02.089. Epub 2017 Feb 27.


ATP synthase from Escherichia coli: Mechanism of rotational catalysis, and inhibition with the ε subunit and phytopolyphenols.

Nakanishi-Matsui M, Sekiya M, Futai M.

Biochim Biophys Acta. 2016 Feb;1857(2):129-140. doi: 10.1016/j.bbabio.2015.11.005. Epub 2015 Nov 14. Review.


A unique mechanism of curcumin inhibition on F1 ATPase.

Sekiya M, Hisasaka R, Iwamoto-Kihara A, Futai M, Nakanishi-Matsui M.

Biochem Biophys Res Commun. 2014 Oct 3;452(4):940-4. doi: 10.1016/j.bbrc.2014.09.027. Epub 2014 Sep 16.


Inhibition of F1-ATPase rotational catalysis by the carboxyl-terminal domain of the ϵ subunit.

Nakanishi-Matsui M, Sekiya M, Yano S, Futai M.

J Biol Chem. 2014 Oct 31;289(44):30822-31. doi: 10.1074/jbc.M114.578872. Epub 2014 Sep 16.


Strong inhibitory effects of curcumin and its demethoxy analog on Escherichia coli ATP synthase F1 sector.

Sekiya M, Chiba E, Satoh M, Yamakoshi H, Iwabuchi Y, Futai M, Nakanishi-Matsui M.

Int J Biol Macromol. 2014 Sep;70:241-5. doi: 10.1016/j.ijbiomac.2014.06.055. Epub 2014 Jul 7.


Elastic rotation of Escherichia coli F(O)F(1) having ε subunit fused with cytochrome b(562) or flavodoxin reductase.

Oka H, Hosokawa H, Nakanishi-Matsui M, Dunn SD, Futai M, Iwamoto-Kihara A.

Biochem Biophys Res Commun. 2014 Apr 18;446(4):889-93. doi: 10.1016/j.bbrc.2014.03.021. Epub 2014 Mar 13.


Diversity of proton pumps in osteoclasts: V-ATPase with a3 and d2 isoforms is a major form in osteoclasts.

Matsumoto N, Daido S, Sun-Wada GH, Wada Y, Futai M, Nakanishi-Matsui M.

Biochim Biophys Acta. 2014 Jun;1837(6):744-9. doi: 10.1016/j.bbabio.2014.02.011. Epub 2014 Feb 19.


Glu-44 in the amino-terminal α-helix of yeast vacuolar ATPase E subunit (Vma4p) has a role for VoV1 assembly.

Okamoto-Terry H, Umeki K, Nakanishi-Matsui M, Futai M.

J Biol Chem. 2013 Dec 20;288(51):36236-43. doi: 10.1074/jbc.M113.506741. Epub 2013 Nov 6.


Lipopolysaccharide-induced multinuclear cells: increased internalization of polystyrene beads and possible signals for cell fusion.

Nakanishi-Matsui M, Yano S, Futai M.

Biochem Biophys Res Commun. 2013 Nov 1;440(4):611-6. doi: 10.1016/j.bbrc.2013.09.109. Epub 2013 Oct 8.


Rotating proton pumping ATPases: subunit/subunit interactions and thermodynamics.

Nakanishi-Matsui M, Sekiya M, Futai M.

IUBMB Life. 2013 Mar;65(3):247-54. doi: 10.1002/iub.1134. Review.


High-resolution single-molecule characterization of the enzymatic states in Escherichia coli F1-ATPase.

Bilyard T, Nakanishi-Matsui M, Steel BC, Pilizota T, Nord AL, Hosokawa H, Futai M, Berry RM.

Philos Trans R Soc Lond B Biol Sci. 2012 Dec 24;368(1611):20120023. doi: 10.1098/rstb.2012.0023. Print 2013 Feb 5.


Lipopolysaccharide induces multinuclear cell from RAW264.7 line with increased phagocytosis activity.

Nakanishi-Matsui M, Yano S, Matsumoto N, Futai M.

Biochem Biophys Res Commun. 2012 Aug 24;425(2):144-9. doi: 10.1016/j.bbrc.2012.07.050. Epub 2012 Jul 20.


Binding of phytopolyphenol piceatannol disrupts β/γ subunit interactions and rate-limiting step of steady-state rotational catalysis in Escherichia coli F1-ATPase.

Sekiya M, Nakamoto RK, Nakanishi-Matsui M, Futai M.

J Biol Chem. 2012 Jun 29;287(27):22771-80. doi: 10.1074/jbc.M112.374868. Epub 2012 May 11.


Rotational catalysis in proton pumping ATPases: from E. coli F-ATPase to mammalian V-ATPase.

Futai M, Nakanishi-Matsui M, Okamoto H, Sekiya M, Nakamoto RK.

Biochim Biophys Acta. 2012 Oct;1817(10):1711-21. doi: 10.1016/j.bbabio.2012.03.015. Epub 2012 Mar 20. Review.


Single molecule behavior of inhibited and active states of Escherichia coli ATP synthase F1 rotation.

Sekiya M, Hosokawa H, Nakanishi-Matsui M, Al-Shawi MK, Nakamoto RK, Futai M.

J Biol Chem. 2010 Dec 31;285(53):42058-67. doi: 10.1074/jbc.M110.176701. Epub 2010 Oct 25.


Roles of the beta subunit hinge domain in ATP synthase F(1) sector: hydrophobic network formed by introduced betaPhe174 inhibits subunit rotation.

Nakanishi-Matsui M, Kashiwagi S, Kojima M, Nonaka T, Futai M.

Biochem Biophys Res Commun. 2010 Apr 30;395(2):173-7. doi: 10.1016/j.bbrc.2010.03.127. Epub 2010 Mar 21.


The mechanism of rotating proton pumping ATPases.

Nakanishi-Matsui M, Sekiya M, Nakamoto RK, Futai M.

Biochim Biophys Acta. 2010 Aug;1797(8):1343-52. doi: 10.1016/j.bbabio.2010.02.014. Epub 2010 Feb 17. Review.


Clinical significance of human papillomavirus genotype by linear array assay in Japanese women with uterine cervical lesions and type 16 physical status by in situ hybridization.

Futai M, Watanabe J, Jobo T, Tsunoda S, Nishimura Y, Watanabe K, Okayasu I, Unno N.

Int J Gynecol Cancer. 2009 Nov;19(8):1396-401. doi: 10.1111/IGC.0b013e3181b661a4.


Temperature dependence of single molecule rotation of the Escherichia coli ATP synthase F1 sector reveals the importance of gamma-beta subunit interactions in the catalytic dwell.

Sekiya M, Nakamoto RK, Al-Shawi MK, Nakanishi-Matsui M, Futai M.

J Biol Chem. 2009 Aug 14;284(33):22401-10. doi: 10.1074/jbc.M109.009019. Epub 2009 Jun 5.


Defective assembly of a hybrid vacuolar H(+)-ATPase containing the mouse testis-specific E1 isoform and yeast subunits.

Hayashi K, Sun-Wada GH, Wada Y, Nakanishi-Matsui M, Futai M.

Biochim Biophys Acta. 2008 Oct;1777(10):1370-7. doi: 10.1016/j.bbabio.2008.06.011. Epub 2008 Jul 9.


The V-type H+-ATPase in vesicular trafficking: targeting, regulation and function.

Marshansky V, Futai M.

Curr Opin Cell Biol. 2008 Aug;20(4):415-26. doi: 10.1016/ Epub 2008 May 27. Review.


Stochastic rotational catalysis of proton pumping F-ATPase.

Nakanishi-Matsui M, Futai M.

Philos Trans R Soc Lond B Biol Sci. 2008 Jun 27;363(1500):2135-42. doi: 10.1098/rstb.2008.2266. Review.


Effects of mutations in the beta subunit hinge domain on ATP synthase F1 sector rotation: interaction between Ser 174 and Ile 163.

Kashiwagi S, Iwamoto-Kihara A, Kojima M, Nonaka T, Futai M, Nakanishi-Matsui M.

Biochem Biophys Res Commun. 2008 Jan 11;365(2):227-31. Epub 2007 Nov 5.


[Proton pumping ATPases: from single molecule analysis to diverse biological functions].

Nakanishi-Matsui M, Fujii-Taira I, Futai M.

Seikagaku. 2007 Jun;79(6):512-9. Review. Japanese. No abstract available.


Rotational catalysis of Escherichia coli ATP synthase F1 sector. Stochastic fluctuation and a key domain of the beta subunit.

Nakanishi-Matsui M, Kashiwagi S, Ubukata T, Iwamoto-Kihara A, Wada Y, Futai M.

J Biol Chem. 2007 Jul 13;282(28):20698-704. Epub 2007 May 21.


Differential expression of a subunit isoforms of the vacuolar-type proton pump ATPase in mouse endocrine tissues.

Sun-Wada GH, Tabata H, Kawamura N, Futai M, Wada Y.

Cell Tissue Res. 2007 Aug;329(2):239-48. Epub 2007 May 12.


A programmable optical angle clamp for rotary molecular motors.

Pilizota T, Bilyard T, Bai F, Futai M, Hosokawa H, Berry RM.

Biophys J. 2007 Jul 1;93(1):264-75. Epub 2007 Apr 13.


Our research on proton pumping ATPases over three decades: their biochemistry, molecular biology and cell biology.

Futai M.

Proc Jpn Acad Ser B Phys Biol Sci. 2007 Jan;82(10):416-38. Epub 2007 Jan 12. Review.


The a3 isoform of V-ATPase regulates insulin secretion from pancreatic beta-cells.

Sun-Wada GH, Toyomura T, Murata Y, Yamamoto A, Futai M, Wada Y.

J Cell Sci. 2006 Nov 1;119(Pt 21):4531-40. Epub 2006 Oct 17.


Stochastic proton pumping ATPases: from single molecules to diverse physiological roles.

Nakanishi-Matsui M, Futai M.

IUBMB Life. 2006 May-Jun;58(5-6):318-22. Review.


V-ATPase interacts with ARNO and Arf6 in early endosomes and regulates the protein degradative pathway.

Hurtado-Lorenzo A, Skinner M, El Annan J, Futai M, Sun-Wada GH, Bourgoin S, Casanova J, Wildeman A, Bechoua S, Ausiello DA, Brown D, Marshansky V.

Nat Cell Biol. 2006 Feb;8(2):124-36. Epub 2006 Jan 15.


Stochastic high-speed rotation of Escherichia coli ATP synthase F1 sector: the epsilon subunit-sensitive rotation.

Nakanishi-Matsui M, Kashiwagi S, Hosokawa H, Cipriano DJ, Dunn SD, Wada Y, Futai M.

J Biol Chem. 2006 Feb 17;281(7):4126-31. Epub 2005 Dec 12.


Distinct expression patterns of different subunit isoforms of the V-ATPase in the rat epididymis.

Pietrement C, Sun-Wada GH, Silva ND, McKee M, Marshansky V, Brown D, Futai M, Breton S.

Biol Reprod. 2006 Jan;74(1):185-94. Epub 2005 Sep 28.


ATP-dependent rotation of mutant ATP synthases defective in proton transport.

Hosokawa H, Nakanishi-Matsui M, Kashiwagi S, Fujii-Taira I, Hayashi K, Iwamoto-Kihara A, Wada Y, Futai M.

J Biol Chem. 2005 Jun 24;280(25):23797-801. Epub 2005 Apr 22.


Simple and straightforward construction of a mouse gene targeting vector using in vitro transposition reactions.

Aoyama M, Agari K, Sun-Wada GH, Futai M, Wada Y.

Nucleic Acids Res. 2005 Mar 22;33(5):e52.


A biological molecular motor, proton-translocating ATP synthase: multidisciplinary approach for a unique membrane enzyme.

Sambongi Y, Ueda I, Wada Y, Futai M.

J Bioenerg Biomembr. 2000 Oct;32(5):441-8.


Proton pumping ATPases and diverse inside-acidic compartments.

Futai M, Sun-Wada GH, Wada Y.

Yakugaku Zasshi. 2004 May;124(5):243-60. Review. Japanese.


Regulatory elements directing gut expression of the GATA6 gene during mouse early development.

Sun-Wada GH, Kamei Y, Wada Y, Futai M.

J Biochem. 2004 Feb;135(2):165-9.


Revised nomenclature for mammalian vacuolar-type H+ -ATPase subunit genes.

Smith AN, Lovering RC, Futai M, Takeda J, Brown D, Karet FE.

Mol Cell. 2003 Oct;12(4):801-3.


Detection of protein-protein interactions on SiO2/Si surfaces by spectroscopic ellipsometry.

Kodera S, Okajima T, Iwabuki H, Kitaguchi D, Kuroda S, Yoshinobu T, Tanizawa K, Futai M, Iwasaki H.

Anal Biochem. 2003 Oct 1;321(1):65-70.


Mouse proton pump ATPase C subunit isoforms (C2-a and C2-b) specifically expressed in kidney and lung.

Sun-Wada GH, Murata Y, Namba M, Yamamoto A, Wada Y, Futai M.

J Biol Chem. 2003 Nov 7;278(45):44843-51. Epub 2003 Aug 28.


Involvement of syntaxin 7 in human gastric epithelial cell vacuolation induced by the Helicobacter pylori-produced cytotoxin VacA.

Suzuki J, Ohnishi H, Wada A, Hirayama T, Ohno H, Ueda N, Yasuda H, Iiri T, Wada Y, Futai M, Mashima H.

J Biol Chem. 2003 Jul 11;278(28):25585-90. Epub 2003 Apr 30.


Specific recognition of Leishmania major poly-beta-galactosyl epitopes by galectin-9: possible implication of galectin-9 in interaction between L. major and host cells.

Pelletier I, Hashidate T, Urashima T, Nishi N, Nakamura T, Futai M, Arata Y, Kasai K-, Hirashima M, Hirabayashi J, Sato S.

J Biol Chem. 2003 Jun 20;278(25):22223-30. Epub 2003 Apr 8.

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