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Items: 1 to 50 of 56

1.

Biphenyl/PCB Degrading bph Genes of Ten Bacterial Strains Isolated from Biphenyl-Contaminated Soil in Kitakyushu, Japan: Comparative and Dynamic Features as Integrative Conjugative Elements (ICEs).

Hirose J, Fujihara H, Watanabe T, Kimura N, Suenaga H, Futagami T, Goto M, Suyama A, Furukawa K.

Genes (Basel). 2019 May 27;10(5). pii: E404. doi: 10.3390/genes10050404.

2.

Essential and distinct roles of phosphatidylinositol 4-kinases, Pik1p and Stt4p, in yeast autophagy.

Kurokawa Y, Konishi R, Yoshida A, Tomioku K, Futagami T, Tamaki H, Tanabe K, Fujita A.

Biochim Biophys Acta Mol Cell Biol Lipids. 2019 Sep;1864(9):1214-1225. doi: 10.1016/j.bbalip.2019.05.004. Epub 2019 May 21.

PMID:
31125705
3.

Effect of pepA deletion and overexpression in Aspergillus luchuensis on sweet potato shochu brewing.

Setoguchi S, Mizutani O, Yamada O, Futagami T, Iwai K, Takase Y, Tamaki H.

J Biosci Bioeng. 2019 Apr 25. pii: S1389-1723(19)30155-0. doi: 10.1016/j.jbiosc.2019.03.019. [Epub ahead of print]

PMID:
31031195
4.

Draft Genome Sequences of Penicillium spp. from Deeply Buried Oligotrophic Marine Sediments.

Sobol MS, Hoshino T, Futagami T, Inagaki F, Kiel Reese B.

Microbiol Resour Announc. 2019 Feb 7;8(6). pii: e01613-18. doi: 10.1128/MRA.01613-18. eCollection 2019 Feb.

5.

Mitochondrial Citrate Transporters CtpA and YhmA Are Required for Extracellular Citric Acid Accumulation and Contribute to Cytosolic Acetyl Coenzyme A Generation in Aspergillus luchuensis mut. kawachii.

Kadooka C, Izumitsu K, Onoue M, Okutsu K, Yoshizaki Y, Takamine K, Goto M, Tamaki H, Futagami T.

Appl Environ Microbiol. 2019 Apr 4;85(8). pii: e03136-18. doi: 10.1128/AEM.03136-18. Print 2019 Apr 15.

PMID:
30737343
6.

Metal-ion-induced expression of gene fragments from subseafloor micro-organisms in the Kumano forearc basin, Nankai Trough.

Wakamatsu T, Morono Y, Futagami T, Terada T, Nishikawa S, Morisawa T, Ohshita K, Inagaki F, Ashiuchi M.

J Appl Microbiol. 2018 Nov;125(5):1396-1407. doi: 10.1111/jam.14061. Epub 2018 Sep 9.

PMID:
30080957
7.

Pex16 is involved in peroxisome and Woronin body formation in the white koji fungus, Aspergillus luchuensis mut. kawachii.

Kimoto D, Kadooka C, Saenrungrot P, Okutsu K, Yoshizaki Y, Takamine K, Goto M, Tamaki H, Futagami T.

J Biosci Bioeng. 2019 Jan;127(1):85-92. doi: 10.1016/j.jbiosc.2018.07.003. Epub 2018 Jul 27.

PMID:
30057159
8.

Nanoscale domain formation of phosphatidylinositol 4-phosphate in the plasma and vacuolar membranes of living yeast cells.

Tomioku KN, Shigekuni M, Hayashi H, Yoshida A, Futagami T, Tamaki H, Tanabe K, Fujita A.

Eur J Cell Biol. 2018 May;97(4):269-278. doi: 10.1016/j.ejcb.2018.03.007. Epub 2018 Mar 27.

PMID:
29609807
9.

Pseudomonas furukawaii sp. nov., a polychlorinated biphenyl-degrading bacterium isolated from biphenyl-contaminated soil in Japan.

Kimura N, Watanabe T, Suenaga H, Fujihara H, Futagami T, Goto M, Hanada S, Hirose J.

Int J Syst Evol Microbiol. 2018 May;68(5):1429-1435. doi: 10.1099/ijsem.0.002670. Epub 2018 Mar 29.

PMID:
29595413
10.

Characterization of amylolytic enzyme overproducing mutant of Aspergillus luchuensis obtained by ion beam mutagenesis.

Kojo T, Kadooka C, Komohara M, Onitsuka S, Tanimura M, Muroi Y, Kurazono S, Shiraishi Y, Oda K, Iwashita K, Onoue M, Okutsu K, Yoshizaki Y, Takamine K, Futagami T, Mori K, Tamaki H.

J Gen Appl Microbiol. 2018 Jan 15;63(6):339-346. doi: 10.2323/jgam.2017.02.004. Epub 2017 Oct 17.

11.

Genome Sequence of Saccharomyces cerevisiae Strain Kagoshima No. 2, Used for Brewing the Japanese Distilled Spirit Shōchū.

Mori K, Kadooka C, Masuda C, Muto A, Okutsu K, Yoshizaki Y, Takamine K, Futagami T, Tamaki H.

Genome Announc. 2017 Oct 12;5(41). pii: e01126-17. doi: 10.1128/genomeA.01126-17.

12.

Multi-gene phylogenetic analysis reveals that shochu-fermenting Saccharomyces cerevisiae strains form a distinct sub-clade of the Japanese sake cluster.

Futagami T, Kadooka C, Ando Y, Okutsu K, Yoshizaki Y, Setoguchi S, Takamine K, Kawai M, Tamaki H.

Yeast. 2017 Oct;34(10):407-415. doi: 10.1002/yea.3243. Epub 2017 Aug 17.

13.

Insights into the genomic plasticity of Pseudomonas putida KF715, a strain with unique biphenyl-utilizing activity and genome instability properties.

Suenaga H, Fujihara H, Kimura N, Hirose J, Watanabe T, Futagami T, Goto M, Shimodaira J, Furukawa K.

Environ Microbiol Rep. 2017 Oct;9(5):589-598. doi: 10.1111/1758-2229.12561. Epub 2017 Jul 13.

PMID:
28631340
14.

Complete Genome Sequence of the Polychlorinated Biphenyl-Degrading Bacterium Pseudomonas putida KF715 (NBRC 110667) Isolated from Biphenyl-Contaminated Soil.

Suenaga H, Yamazoe A, Hosoyama A, Kimura N, Hirose J, Watanabe T, Fujihara H, Futagami T, Goto M, Furukawa K.

Genome Announc. 2017 Feb 16;5(7). pii: e01624-16. doi: 10.1128/genomeA.01624-16.

15.

Key volatile compounds in red koji-shochu, a Monascus-fermented product, and their formation steps during fermentation.

Rahayu YY, Yoshizaki Y, Yamaguchi K, Okutsu K, Futagami T, Tamaki H, Sameshima Y, Takamine K.

Food Chem. 2017 Jun 1;224:398-406. doi: 10.1016/j.foodchem.2016.12.005. Epub 2016 Dec 7.

PMID:
28159286
16.

Genome sequence of Aspergillus luchuensis NBRC 4314.

Yamada O, Machida M, Hosoyama A, Goto M, Takahashi T, Futagami T, Yamagata Y, Takeuchi M, Kobayashi T, Koike H, Abe K, Asai K, Arita M, Fujita N, Fukuda K, Higa KI, Horikawa H, Ishikawa T, Jinno K, Kato Y, Kirimura K, Mizutani O, Nakasone K, Sano M, Shiraishi Y, Tsukahara M, Gomi K.

DNA Res. 2016 Dec;23(6):507-515. Epub 2016 Sep 20.

17.

Lack of T Cell Response to iPSC-Derived Retinal Pigment Epithelial Cells from HLA Homozygous Donors.

Sugita S, Iwasaki Y, Makabe K, Kimura T, Futagami T, Suegami S, Takahashi M.

Stem Cell Reports. 2016 Oct 11;7(4):619-634. doi: 10.1016/j.stemcr.2016.08.011. Epub 2016 Sep 15.

18.

Marker recycling system using the sC gene in the white koji mold, Aspergillus luchuensis mut. kawachii.

Kadooka C, Onitsuka S, Uzawa M, Tashiro S, Kajiwara Y, Takashita H, Okutsu K, Yoshizaki Y, Takamine K, Goto M, Tamaki H, Futagami T.

J Gen Appl Microbiol. 2016 Jul 14;62(3):160-3. doi: 10.2323/jgam.2016.01.001. Epub 2016 May 23. No abstract available.

19.

Draft Genome Sequence of the Polychlorinated Biphenyl-Degrading Bacterium Pseudomonas stutzeri KF716 (NBRC 110668).

Hirose J, Yamazoe A, Hosoyama A, Kimura N, Suenaga H, Watanabe T, Fujihara H, Futagami T, Goto M, Furukawa K.

Genome Announc. 2015 Oct 22;3(5). pii: e01215-15. doi: 10.1128/genomeA.01215-15.

20.

Draft Genome Sequence of the Polychlorinated Biphenyl-Degrading Bacterium Comamonas testosteroni KF712 (NBRC 110673).

Hirose J, Yamazoe A, Hosoyama A, Kimura N, Suenaga H, Watanabe T, Fujihara H, Futagami T, Goto M, Furukawa K.

Genome Announc. 2015 Oct 15;3(5). pii: e01214-15. doi: 10.1128/genomeA.01214-15.

21.

Draft Genome Sequence of Pseudomonas aeruginosa KF702 (NBRC 110665), a Polychlorinated Biphenyl-Degrading Bacterium Isolated from Biphenyl-Contaminated Soil.

Fujihara H, Yamazoe A, Hosoyama A, Suenaga H, Kimura N, Hirose J, Watanabe T, Futagami T, Goto M, Furukawa K.

Genome Announc. 2015 May 21;3(3). pii: e00517-15. doi: 10.1128/genomeA.00517-15.

22.

Draft Genome Sequence of Pseudomonas abietaniphila KF701 (NBRC110664), a Polychlorinated Biphenyl-Degrading Bacterium Isolated from Biphenyl-Contaminated Soil.

Fujihara H, Yamazoe A, Hosoyama A, Suenaga H, Kimura N, Hirose J, Watanabe T, Futagami T, Goto M, Furukawa K.

Genome Announc. 2015 May 14;3(3). pii: e00473-15. doi: 10.1128/genomeA.00473-15.

23.

Draft Genome Sequence of Pseudomonas toyotomiensis KF710, a Polychlorinated Biphenyl-Degrading Bacterium Isolated from Biphenyl-Contaminated Soil.

Watanabe T, Yamazoe A, Hosoyama A, Fujihara H, Suenaga H, Hirose J, Futagami T, Goto M, Kimura N, Furukawa K.

Genome Announc. 2015 Apr 2;3(2). pii: e00223-15. doi: 10.1128/genomeA.00223-15.

24.

Draft Genome Sequence of Cupriavidus pauculus Strain KF709, a Biphenyl-Utilizing Bacterium Isolated from Biphenyl-Contaminated Soil.

Watanabe T, Yamazoe A, Hosoyama A, Fujihara H, Suenaga H, Hirose J, Futagami T, Goto M, Kimura N, Furukawa K.

Genome Announc. 2015 Mar 26;3(2). pii: e00222-15. doi: 10.1128/genomeA.00222-15.

25.

Draft Genome Sequence of the Polychlorinated Biphenyl-Degrading Bacterium Cupriavidus basilensis KF708 (NBRC 110671) Isolated from Biphenyl-Contaminated Soil.

Suenaga H, Yamazoe A, Hosoyama A, Kimura N, Hirose J, Watanabe T, Fujihara H, Futagami T, Goto M, Furukawa K.

Genome Announc. 2015 Mar 19;3(2). pii: e00143-15. doi: 10.1128/genomeA.00143-15.

26.

Draft Genome Sequence of the Polychlorinated Biphenyl-Degrading Bacterium Pseudomonas putida KF703 (NBRC 110666) Isolated from Biphenyl-Contaminated Soil.

Suenaga H, Yamazoe A, Hosoyama A, Kimura N, Hirose J, Watanabe T, Fujihara H, Futagami T, Goto M, Furukawa K.

Genome Announc. 2015 Mar 19;3(2). pii: e00142-15. doi: 10.1128/genomeA.00142-15.

27.

Draft Genome Sequence of Pseudomonas abietaniphila KF717 (NBRC 110669), Isolated from Biphenyl-Contaminated Soil in Japan.

Kimura N, Yamazoe A, Hosoyama A, Hirose J, Watanabe T, Suenaga H, Fujihara H, Futagami T, Goto M, Furukawa K.

Genome Announc. 2015 Mar 19;3(2). pii: e00059-15. doi: 10.1128/genomeA.00059-15.

28.

Determination of HLA-A, -C, -B, -DRB1 allele and haplotype frequency in Japanese population based on family study.

Ikeda N, Kojima H, Nishikawa M, Hayashi K, Futagami T, Tsujino T, Kusunoki Y, Fujii N, Suegami S, Miyazaki Y, Middleton D, Tanaka H, Saji H.

Tissue Antigens. 2015 Apr;85(4):252-9. doi: 10.1111/tan.12536. Epub 2015 Feb 27.

29.

Transcriptomic analysis of temperature responses of Aspergillus kawachii during barley koji production.

Futagami T, Mori K, Wada S, Ida H, Kajiwara Y, Takashita H, Tashiro K, Yamada O, Omori T, Kuhara S, Goto M.

Appl Environ Microbiol. 2015 Feb;81(4):1353-63.

30.

The putative stress sensor protein MtlA is required for conidia formation, cell wall stress tolerance, and cell wall integrity in Aspergillus nidulans.

Futagami T, Seto K, Kajiwara Y, Takashita H, Omori T, Takegawa K, Goto M.

Biosci Biotechnol Biochem. 2014;78(2):326-35. doi: 10.1080/09168451.2014.878218. Epub 2014 Apr 14.

PMID:
25036689
31.

High frequency of phylogenetically diverse reductive dehalogenase-homologous genes in deep subseafloor sedimentary metagenomes.

Kawai M, Futagami T, Toyoda A, Takaki Y, Nishi S, Hori S, Arai W, Tsubouchi T, Morono Y, Uchiyama I, Ito T, Fujiyama A, Inagaki F, Takami H.

Front Microbiol. 2014 Mar 3;5:80. doi: 10.3389/fmicb.2014.00080. eCollection 2014.

32.

Identification of a novel HLA-B allele HLA-B*07:185 in a Japanese individual.

Maekawa K, Futagami T, Kusunoki Y, Matsuzaki Y, Takikawa H.

Tissue Antigens. 2013 Dec;82(6):434-6. doi: 10.1111/tan.12223. Epub 2013 Oct 22. No abstract available.

PMID:
24147826
33.

GfsA encodes a novel galactofuranosyltransferase involved in biosynthesis of galactofuranose antigen of O-glycan in Aspergillus nidulans and Aspergillus fumigatus.

Komachi Y, Hatakeyama S, Motomatsu H, Futagami T, Kizjakina K, Sobrado P, Ekino K, Takegawa K, Goto M, Nomura Y, Oka T.

Mol Microbiol. 2013 Dec;90(5):1054-1073. doi: 10.1111/mmi.12416. Epub 2013 Oct 21.

34.

Enrichment of a microbial consortium capable of reductive deiodination of 2,4,6-triiodophenol.

Oba Y, Futagami T, Amachi S.

J Biosci Bioeng. 2014 Mar;117(3):310-7. doi: 10.1016/j.jbiosc.2013.08.011. Epub 2013 Sep 14.

PMID:
24041542
35.

Construction of a ligD disruptant for efficient gene targeting in white koji mold, Aspergillus kawachii.

Tashiro S, Futagami T, Wada S, Kajiwara Y, Takashita H, Omori T, Takahashi T, Yamada O, Takegawa K, Goto M.

J Gen Appl Microbiol. 2013;59(3):257-60. No abstract available.

36.

Evaluation of the inhibitory effects of chloroform on ortho-chlorophenol- and chloroethene-dechlorinating Desulfitobacterium strains.

Futagami T, Fukaki Y, Fujihara H, Takegawa K, Goto M, Furukawa K.

AMB Express. 2013 May 27;3(1):30. doi: 10.1186/2191-0855-3-30.

37.

Distribution of dehalogenation activity in subseafloor sediments of the Nankai Trough subduction zone.

Futagami T, Morono Y, Terada T, Kaksonen AH, Inagaki F.

Philos Trans R Soc Lond B Biol Sci. 2013 Mar 11;368(1616):20120249. doi: 10.1098/rstb.2012.0249. Print 2013 Apr 19.

38.

Metabolically active microbial communities in marine sediment under high-CO(2) and low-pH extremes.

Yanagawa K, Morono Y, de Beer D, Haeckel M, Sunamura M, Futagami T, Hoshino T, Terada T, Nakamura K, Urabe T, Rehder G, Boetius A, Inagaki F.

ISME J. 2013 Mar;7(3):555-67. doi: 10.1038/ismej.2012.124. Epub 2012 Oct 25.

39.

Putative cell wall integrity sensor proteins in Aspergillus nidulans.

Futagami T, Goto M.

Commun Integr Biol. 2012 Mar 1;5(2):206-8. doi: 10.4161/cib.18993.

40.

Bacterial dominance in subseafloor sediments characterized by methane hydrates.

Briggs BR, Inagaki F, Morono Y, Futagami T, Huguet C, Rosell-Mele A, Lorenson TD, Colwell FS.

FEMS Microbiol Ecol. 2012 Jul;81(1):88-98. doi: 10.1111/j.1574-6941.2012.01311.x. Epub 2012 Feb 16.

41.

Genome sequence of the white koji mold Aspergillus kawachii IFO 4308, used for brewing the Japanese distilled spirit shochu.

Futagami T, Mori K, Yamashita A, Wada S, Kajiwara Y, Takashita H, Omori T, Takegawa K, Tashiro K, Kuhara S, Goto M.

Eukaryot Cell. 2011 Nov;10(11):1586-7. doi: 10.1128/EC.05224-11.

42.

Putative stress sensors WscA and WscB are involved in hypo-osmotic and acidic pH stress tolerance in Aspergillus nidulans.

Futagami T, Nakao S, Kido Y, Oka T, Kajiwara Y, Takashita H, Omori T, Furukawa K, Goto M.

Eukaryot Cell. 2011 Nov;10(11):1504-15. doi: 10.1128/EC.05080-11. Epub 2011 Sep 16.

43.

Enrichment and characterization of a trichloroethene-dechlorinating consortium containing multiple "dehalococcoides" strains.

Futagami T, Okamoto F, Hashimoto H, Fukuzawa K, Higashi K, Nazir KH, Wada E, Suyama A, Takegawa K, Goto M, Nakamura K, Furukawa K.

Biosci Biotechnol Biochem. 2011;75(7):1268-74. Epub 2011 Jul 7.

44.

Dehalogenation activities and distribution of reductive dehalogenase homologous genes in marine subsurface sediments.

Futagami T, Morono Y, Terada T, Kaksonen AH, Inagaki F.

Appl Environ Microbiol. 2009 Nov;75(21):6905-9. doi: 10.1128/AEM.01124-09. Epub 2009 Sep 11.

45.

Functional characterization of the trigger factor protein PceT of tetrachloroethene-dechlorinating Desulfitobacterium hafniense Y51.

Morita Y, Futagami T, Goto M, Furukawa K.

Appl Microbiol Biotechnol. 2009 Jun;83(4):775-81. doi: 10.1007/s00253-009-1958-z. Epub 2009 Apr 4.

PMID:
19347335
46.

Biochemical and genetic bases of dehalorespiration.

Futagami T, Goto M, Furukawa K.

Chem Rec. 2008;8(1):1-12. doi: 10.1002/tcr.20134. Review.

PMID:
18302277
47.

Effects of chloromethanes on growth of and deletion of the pce gene cluster in dehalorespiring Desulfitobacterium hafniense strain Y51.

Futagami T, Yamaguchi T, Nakayama S, Goto M, Furukawa K.

Appl Environ Microbiol. 2006 Sep;72(9):5998-6003.

48.

[Biochemical and genetic bases of chloroethene-dehalorespiring bacteria].

Futagami T, Goto M, Furukawa K.

Tanpakushitsu Kakusan Koso. 2005 Oct;50(12):1548-54. Review. Japanese. No abstract available.

PMID:
16218455
49.

Emergence of two types of nondechlorinating variants in the tetrachloroethene-halorespiring Desulfitobacterium sp. strain Y51.

Futagami T, Tsuboi Y, Suyama A, Goto M, Furukawa K.

Appl Microbiol Biotechnol. 2006 May;70(6):720-8. Epub 2005 Aug 23.

PMID:
16133337
50.

Biochemical and molecular characterization of a tetrachloroethene dechlorinating Desulfitobacterium sp. strain Y51: a review.

Furukawa K, Suyama A, Tsuboi Y, Futagami T, Goto M.

J Ind Microbiol Biotechnol. 2005 Dec;32(11-12):534-41. Epub 2005 Jun 16.

PMID:
15959725

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