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Items: 1 to 50 of 61

1.

Using Whole Genome Analysis to Examine Recombination across Diverse Sequence Types of Staphylococcus aureus.

Driebe EM, Sahl JW, Roe C, Bowers JR, Schupp JM, Gillece JD, Kelley E, Price LB, Pearson TR, Hepp CM, Brzoska PM, Cummings CA, Furtado MR, Andersen PS, Stegger M, Engelthaler DM, Keim PS.

PLoS One. 2015 Jul 10;10(7):e0130955. doi: 10.1371/journal.pone.0130955. eCollection 2015.

2.

Genomic characterization of Salmonella Cerro ST367, an emerging Salmonella subtype in cattle in the United States.

Rodriguez-Rivera LD, Moreno Switt AI, Degoricija L, Fang R, Cummings CA, Furtado MR, Wiedmann M, den Bakker HC.

BMC Genomics. 2014 Jun 4;15:427. doi: 10.1186/1471-2164-15-427.

3.

Progress toward an efficient panel of SNPs for ancestry inference.

Kidd KK, Speed WC, Pakstis AJ, Furtado MR, Fang R, Madbouly A, Maiers M, Middha M, Friedlaender FR, Kidd JR.

Forensic Sci Int Genet. 2014 May;10:23-32. doi: 10.1016/j.fsigen.2014.01.002. Epub 2014 Jan 15.

4.

Haplotype structure and positive selection at TLR1.

Heffelfinger C, Pakstis AJ, Speed WC, Clark AP, Haigh E, Fang R, Furtado MR, Kidd KK, Snyder MP.

Eur J Hum Genet. 2014 Apr;22(4):551-7. doi: 10.1038/ejhg.2013.194. Epub 2013 Sep 4.

5.

Validation of the Applied Biosystems MicroSEQ real-time PCR system for detection of E. coli O157:H7 in food.

Wong LY, Cao Y, Balachandran P, Zoder P, Furtado MR, Petrauskene OV, Tebbs RS.

J AOAC Int. 2012 Sep-Oct;95(5):1495-504.

PMID:
23175985
6.

Comparative analysis of genome sequences covering the seven cronobacter species.

Joseph S, Desai P, Ji Y, Cummings CA, Shih R, Degoricija L, Rico A, Brzoska P, Hamby SE, Masood N, Hariri S, Sonbol H, Chuzhanova N, McClelland M, Furtado MR, Forsythe SJ.

PLoS One. 2012;7(11):e49455. doi: 10.1371/journal.pone.0049455. Epub 2012 Nov 16.

7.

Assuring the quality of next-generation sequencing in clinical laboratory practice.

Gargis AS, Kalman L, Berry MW, Bick DP, Dimmock DP, Hambuch T, Lu F, Lyon E, Voelkerding KV, Zehnbauer BA, Agarwala R, Bennett SF, Chen B, Chin EL, Compton JG, Das S, Farkas DH, Ferber MJ, Funke BH, Furtado MR, Ganova-Raeva LM, Geigenmüller U, Gunselman SJ, Hegde MR, Johnson PL, Kasarskis A, Kulkarni S, Lenk T, Liu CS, Manion M, Manolio TA, Mardis ER, Merker JD, Rajeevan MS, Reese MG, Rehm HL, Simen BB, Yeakley JM, Zook JM, Lubin IM.

Nat Biotechnol. 2012 Nov;30(11):1033-6. doi: 10.1038/nbt.2403. No abstract available.

8.

Evaluation of applied biosystems MicroSEQ real-time PCR system for detection of Listeria spp. in food and environmental samples.

Petrauskene OV, Cao Y, Zoder P, Wong LY, Balachandran P, Furtado MR, Tebbs RS.

J AOAC Int. 2012 Jul-Aug;95(4):1074-83.

PMID:
22970575
9.

Identification and characterization of novel Salmonella mobile elements involved in the dissemination of genes linked to virulence and transmission.

Moreno Switt AI, den Bakker HC, Cummings CA, Rodriguez-Rivera LD, Govoni G, Raneiri ML, Degoricija L, Brown S, Hoelzer K, Peters JE, Bolchacova E, Furtado MR, Wiedmann M.

PLoS One. 2012;7(7):e41247. doi: 10.1371/journal.pone.0041247. Epub 2012 Jul 20.

10.

Mini-haplotypes as lineage informative SNPs and ancestry inference SNPs.

Pakstis AJ, Fang R, Furtado MR, Kidd JR, Kidd KK.

Eur J Hum Genet. 2012 Nov;20(11):1148-54. doi: 10.1038/ejhg.2012.69. Epub 2012 Apr 25.

11.

Expanding data and resources for forensic use of SNPs in individual identification.

Kidd KK, Kidd JR, Speed WC, Fang R, Furtado MR, Hyland FC, Pakstis AJ.

Forensic Sci Int Genet. 2012 Sep;6(5):646-52. doi: 10.1016/j.fsigen.2012.02.012. Epub 2012 Mar 22.

PMID:
22445421
12.

Rapid detection of Salmonella in pet food: design and evaluation of integrated methods based on real-time PCR detection.

Balachandran P, Friberg M, Vanlandingham V, Kozak K, Manolis A, Brevnov M, Crowley E, Bird P, Goins D, Furtado MR, Petrauskene OV, Tebbs RS, Charbonneau D.

J Food Prot. 2012 Feb;75(2):347-52. doi: 10.4315/0362-028X.JFP-11-210.

PMID:
22289596
13.

Dominance of multidrug resistant CC271 clones in macrolide-resistant streptococcus pneumoniae in Arizona.

Bowers JR, Driebe EM, Nibecker JL, Wojack BR, Sarovich DS, Wong AH, Brzoska PM, Hubert N, Knadler A, Watson LM, Wagner DM, Furtado MR, Saubolle M, Engelthaler DM, Keim PS.

BMC Microbiol. 2012 Jan 18;12:12. doi: 10.1186/1471-2180-12-12.

14.

A sample extraction method for faster, more sensitive PCR-based detection of pathogens in blood culture.

Regan JF, Furtado MR, Brevnov MG, Jordan JA.

J Mol Diagn. 2012 Mar-Apr;14(2):120-9. doi: 10.1016/j.jmoldx.2011.10.001. Epub 2012 Jan 11.

15.

Evaluation of applied biosystems MicroSeq real-time PCR system for detection of Listeria monocytogenes in food. Performance Tested Method 011002.

Tebbs RS, Balachandran P, Wong LY, Zoder P, Furtado MR, Petrauskene OV, Cao Y.

J AOAC Int. 2011 Sep-Oct;94(5):1481-9.

PMID:
22165012
16.

A whole-genome single nucleotide polymorphism-based approach to trace and identify outbreaks linked to a common Salmonella enterica subsp. enterica serovar Montevideo pulsed-field gel electrophoresis type.

Bakker HC, Switt AI, Cummings CA, Hoelzer K, Degoricija L, Rodriguez-Rivera LD, Wright EM, Fang R, Davis M, Root T, Schoonmaker-Bopp D, Musser KA, Villamil E, Waechter H, Kornstein L, Furtado MR, Wiedmann M.

Appl Environ Microbiol. 2011 Dec;77(24):8648-55. doi: 10.1128/AEM.06538-11. Epub 2011 Oct 14.

17.

Evaluation of applied biosystems MicroSEQ real-time PCR system for detection of Salmonella spp. in food.

Balachandran P, Cao Y, Wong L, Furtado MR, Petrauskene OV, Tebbs RS.

J AOAC Int. 2011 Jul-Aug;94(4):1106-16.

PMID:
21919345
18.

Genome sequencing reveals diversification of virulence factor content and possible host adaptation in distinct subpopulations of Salmonella enterica.

den Bakker HC, Moreno Switt AI, Govoni G, Cummings CA, Ranieri ML, Degoricija L, Hoelzer K, Rodriguez-Rivera LD, Brown S, Bolchacova E, Furtado MR, Wiedmann M.

BMC Genomics. 2011 Aug 22;12:425. doi: 10.1186/1471-2164-12-425.

19.

Design and validation of a novel multiplex real-time PCR assay for Vibrio pathogen detection.

Tebbs RS, Brzoska PM, Furtado MR, Petrauskene OV.

J Food Prot. 2011 Jun;74(6):939-48. doi: 10.4315/0362-028X.JFP-10-511.

PMID:
21669071
20.

Low dose radiation response curves, networks and pathways in human lymphoblastoid cells exposed from 1 to 10cGy of acute gamma radiation.

Wyrobek AJ, Manohar CF, Krishnan VV, Nelson DO, Furtado MR, Bhattacharya MS, Marchetti F, Coleman MA.

Mutat Res. 2011 Jun 17;722(2):119-30. doi: 10.1016/j.mrgentox.2011.03.002. Epub 2011 Apr 15.

PMID:
21497671
21.

Comparative genomics of the bacterial genus Listeria: Genome evolution is characterized by limited gene acquisition and limited gene loss.

den Bakker HC, Cummings CA, Ferreira V, Vatta P, Orsi RH, Degoricija L, Barker M, Petrauskene O, Furtado MR, Wiedmann M.

BMC Genomics. 2010 Dec 2;11:688. doi: 10.1186/1471-2164-11-688.

22.

Accurate, rapid and high-throughput detection of strain-specific polymorphisms in Bacillus anthracis and Yersinia pestis by next-generation sequencing.

Cummings CA, Bormann Chung CA, Fang R, Barker M, Brzoska P, Williamson PC, Beaudry J, Matthews M, Schupp J, Wagner DM, Birdsell D, Vogler AJ, Furtado MR, Keim P, Budowle B.

Investig Genet. 2010 Sep 1;1(1):5. doi: 10.1186/2041-2223-1-5.

23.

Transvaginal grey scale histogram of the cervix at 20-25 weeks of pregnancy.

Furtado MR, Pires CR, Araujo Júnior E, De Souza E, Nardozza LM, Moron AF.

Aust N Z J Obstet Gynaecol. 2010 Oct;50(5):444-9. doi: 10.1111/j.1479-828X.2010.01202.x. Epub 2010 Sep 10.

PMID:
21039378
24.

Mutability of Y-chromosomal microsatellites: rates, characteristics, molecular bases, and forensic implications.

Ballantyne KN, Goedbloed M, Fang R, Schaap O, Lao O, Wollstein A, Choi Y, van Duijn K, Vermeulen M, Brauer S, Decorte R, Poetsch M, von Wurmb-Schwark N, de Knijff P, Labuda D, Vézina H, Knoblauch H, Lessig R, Roewer L, Ploski R, Dobosz T, Henke L, Henke J, Furtado MR, Kayser M.

Am J Hum Genet. 2010 Sep 10;87(3):341-53. doi: 10.1016/j.ajhg.2010.08.006.

25.

New highly sensitive and accurate lyophilized real-time RT-PCR tests for early detection of avian influenza.

Petrauskene OV, Schumaker MA, Thorstenson Y, Fearnley C, Pavlidis T, Liew SN, Cork J, Furtado MR, Wakeley PR, Slomka MJ.

Avian Dis. 2010 Mar;54(1 Suppl):686-9.

PMID:
20521716
26.

SNPs for a universal individual identification panel.

Pakstis AJ, Speed WC, Fang R, Hyland FC, Furtado MR, Kidd JR, Kidd KK.

Hum Genet. 2010 Mar;127(3):315-24. doi: 10.1007/s00439-009-0771-1.

PMID:
19937056
27.

Comprehensive mutation analysis of 17 Y-chromosomal short tandem repeat polymorphisms included in the AmpFlSTR Yfiler PCR amplification kit.

Goedbloed M, Vermeulen M, Fang RN, Lembring M, Wollstein A, Ballantyne K, Lao O, Brauer S, Krüger C, Roewer L, Lessig R, Ploski R, Dobosz T, Henke L, Henke J, Furtado MR, Kayser M.

Int J Legal Med. 2009 Nov;123(6):471-82. doi: 10.1007/s00414-009-0342-y. Epub 2009 Mar 26.

28.

Developmental validation of the PrepFiler Forensic DNA Extraction Kit for extraction of genomic DNA from biological samples.

Brevnov MG, Pawar HS, Mundt J, Calandro LM, Furtado MR, Shewale JG.

J Forensic Sci. 2009 May;54(3):599-607. doi: 10.1111/j.1556-4029.2009.01013.x. Epub 2009 Mar 16.

PMID:
19302383
29.

Developmental validation of the Quantifiler Duo DNA Quantification kit for simultaneous quantification of total human and human male DNA and detection of PCR inhibitors in biological samples.

Barbisin M, Fang R, O'Shea CE, Calandro LM, Furtado MR, Shewale JG.

J Forensic Sci. 2009 Mar;54(2):305-19. doi: 10.1111/j.1556-4029.2008.00951.x. Epub 2009 Jan 27. Erratum in: J Forensic Sci. 2009 Nov;54(6):1502. J Forensic Sci. 2012 Jan;57(1):282.

PMID:
19175708
30.

Evaluation of the Genplex SNP typing system and a 49plex forensic marker panel.

Phillips C, Fang R, Ballard D, Fondevila M, Harrison C, Hyland F, Musgrave-Brown E, Proff C, Ramos-Luis E, Sobrino B, Carracedo A, Furtado MR, Syndercombe Court D, Schneider PM; SNPforID Consortium.

Forensic Sci Int Genet. 2007 Jun;1(2):180-5. doi: 10.1016/j.fsigen.2007.02.007. Epub 2007 Mar 23.

PMID:
19083752
31.

Bone morphogenetic protein-2 upregulates expression and function of voltage-gated K+ channels in human pulmonary artery smooth muscle cells.

Fantozzi I, Platoshyn O, Wong AH, Zhang S, Remillard CV, Furtado MR, Petrauskene OV, Yuan JX.

Am J Physiol Lung Cell Mol Physiol. 2006 Nov;291(5):L993-1004. Epub 2006 Jun 30.

32.

Persistence of HIV-1 transcription in peripheral-blood mononuclear cells in patients receiving potent antiretroviral therapy.

Furtado MR, Callaway DS, Phair JP, Kunstman KJ, Stanton JL, Macken CA, Perelson AS, Wolinsky SM.

N Engl J Med. 1999 May 27;340(21):1614-22.

33.

Adaptive evolution of human immunodeficiency virus-type 1 during the natural course of infection.

Wolinsky SM, Korber BT, Neumann AU, Daniels M, Kunstman KJ, Whetsell AJ, Furtado MR, Cao Y, Ho DD, Safrit JT.

Science. 1996 Apr 26;272(5261):537-42.

PMID:
8614801
34.
35.

Mutational analysis of the adenovirus E2-early promoter in fission yeast Schizosaccharomyces pombe.

Manohar CF, Furtado MR.

Biochem Mol Biol Int. 1995 Nov;37(4):653-63.

PMID:
8589638
37.

[Hypertension in woman. A special case?].

Furtado MR, Martin JF.

Arq Bras Cardiol. 1995 Feb;64(2):141-4. Review. Portuguese. No abstract available.

PMID:
7575160
38.

[Use of carvedilol compared to nifedipine in the treatment of mild and moderate essential arterial hypertension].

Plavnik FL, Freitas AF, Portela JE, Dantas M, Spritzer T, Kohlmann NE, Spritzer N, Furtado MR, Kohlmann O Jr.

Arq Bras Cardiol. 1994 Nov;63(5):405-8. Portuguese.

PMID:
7611920
40.

Retinoic acid induced expression of homeobox genes in human neuroblastoma cells.

Manohar CF, Salwen HR, Furtado MR, Cohn SL.

Prog Clin Biol Res. 1994;385:229-35. No abstract available.

PMID:
7972214
41.

Hox gene expression in differentiating human neuroblastoma cells.

Manohar CF, Furtado MR, Salwen HR, Cohn SL.

Biochem Mol Biol Int. 1993 Jul;30(4):733-41.

PMID:
8104620
42.

Detection of HIV-1 DNA and messenger RNA in individual cells by PCR-driven in situ hybridization and flow cytometry.

Patterson BK, Till M, Otto P, Goolsby C, Furtado MR, McBride LJ, Wolinsky SM.

Science. 1993 May 14;260(5110):976-9.

PMID:
8493534
43.
44.

Selective transmission of human immunodeficiency virus type-1 variants from mothers to infants.

Wolinsky SM, Wike CM, Korber BT, Hutto C, Parks WP, Rosenblum LL, Kunstman KJ, Furtado MR, Muñoz JL.

Science. 1992 Feb 28;255(5048):1134-7.

PMID:
1546316
45.
46.

Renal sodium handling after noradrenergic stimulation of the lateral hypothalamic area in rats.

Gontijo JA, Garcia WE, Figueiredo JF, Silva-Netto CR, Furtado MR.

Braz J Med Biol Res. 1992;25(9):937-42.

PMID:
1342841
47.
48.

Nucleotide and derived amino-acid sequences of the CRE-binding proteins from rat C6 glioma and HeLa cells.

Short ML, Manohar CF, Furtado MR, Ghadge GD, Wolinsky SM, Thimmapaya B, Jungmann RA.

Nucleic Acids Res. 1991 Aug 11;19(15):4290. No abstract available.

49.

Renal water handling evaluated by lithium clearance following adrenergic and cholinergic stimulation of the lateral hypothalamic area.

Gontijo JA, Garcia WE, Figueiredo JF, Silva-Netto CR, Furtado MR.

Braz J Med Biol Res. 1991;24(8):837-42.

PMID:
1797275
50.

Inhibition of gastric acid secretion by cholinergic stimulation of the lateral hypothalamic area.

Gontijo JA, Silva-Netto CR, Furtado MR.

Braz J Med Biol Res. 1990;23(3-4):361-5. Review.

PMID:
2094549

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