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Items: 1 to 50 of 274

1.

Mapping haze-komi on rice koji grains using β-glucuronidase expressing Aspergillus oryzae and mass spectrometry imaging.

Wisman AP, Tamada Y, Hirohata S, Gomi K, Fukusaki E, Shimma S.

J Biosci Bioeng. 2019 Oct 14. pii: S1389-1723(19)30456-6. doi: 10.1016/j.jbiosc.2019.09.016. [Epub ahead of print]

PMID:
31623949
2.

Accumulation of sugars and nucleosides in response to high salt and butanol stress in 1-butanol producing Synechococcus elongatus.

Fathima AM, Laviña WA, Putri SP, Fukusaki E.

J Biosci Bioeng. 2019 Sep 18. pii: S1389-1723(19)30380-9. doi: 10.1016/j.jbiosc.2019.08.015. [Epub ahead of print]

PMID:
31542348
3.

Comparison of metabolic profiles of yeasts based on the difference of the Crabtree positive and negative.

Imura M, Nitta K, Iwakiri R, Matsuda F, Shimizu H, Fukusaki E.

J Biosci Bioeng. 2019 Sep 16. pii: S1389-1723(19)30422-0. doi: 10.1016/j.jbiosc.2019.07.007. [Epub ahead of print]

PMID:
31537452
4.

GC/MS based metabolite profiling of Indonesian specialty coffee from different species and geographical origin.

Putri SP, Irifune T, Yusianto, Fukusaki E.

Metabolomics. 2019 Sep 18;15(10):126. doi: 10.1007/s11306-019-1591-5.

PMID:
31535287
5.

Suppression of lactate production by using sucrose as a carbon source in lactic acid bacteria.

Kawai M, Harada R, Yoda N, Yamasaki-Yashiki S, Fukusaki E, Katakura Y.

J Biosci Bioeng. 2019 Jul 29. pii: S1389-1723(19)30076-3. doi: 10.1016/j.jbiosc.2019.06.017. [Epub ahead of print]

PMID:
31371162
6.

High-Throughput LC-MS/MS Method for Chiral Amino Acid Analysis Without Derivatization.

Nakano Y, Taniguchi M, Umakoshi Y, Watai D, Fukusaki E.

Methods Mol Biol. 2019;2030:253-261. doi: 10.1007/978-1-4939-9639-1_19.

PMID:
31347123
7.

Tailor-made poly-γ-glutamic acid production.

Halmschlag B, Steurer X, Putri SP, Fukusaki E, Blank LM.

Metab Eng. 2019 Sep;55:239-248. doi: 10.1016/j.ymben.2019.07.009. Epub 2019 Jul 22.

PMID:
31344452
8.

Automatic switching valve system to minimize variation of liquid chromatography-tandem mass spectrometry-based chiral amino acid profiling.

Umakoshi Y, Nakano Y, Fukuda K, Watanabe K, Miyawaki I, Fukusaki E.

J Biosci Bioeng. 2019 Jul 9. pii: S1389-1723(18)31196-4. doi: 10.1016/j.jbiosc.2019.06.005. [Epub ahead of print]

PMID:
31300203
9.

Tandem Mass Spectrometry Imaging Reveals Distinct Accumulation Patterns of Steroid Structural Isomers in Human Adrenal Glands.

Takeo E, Sugiura Y, Uemura T, Nishimoto K, Yasuda M, Sugiyama E, Ohtsuki S, Higashi T, Nishikawa T, Suematsu M, Fukusaki E, Shimma S.

Anal Chem. 2019 Jul 16;91(14):8918-8925. doi: 10.1021/acs.analchem.9b00619. Epub 2019 Jun 26.

PMID:
31204806
10.

A metabolomics-based approach for the evaluation of off-tree ripening conditions and different postharvest treatments in mangosteen (Garcinia mangostana).

R Parijadi AA, Ridwani S, Dwivany FM, Putri SP, Fukusaki E.

Metabolomics. 2019 May 3;15(5):73. doi: 10.1007/s11306-019-1526-1.

PMID:
31054000
11.

Identifying metabolic elements that contribute to productivity of 1-propanol bioproduction using metabolomic analysis.

Putri SP, Nakayama Y, Shen C, Noguchi S, Nitta K, Bamba T, Pontrelli S, Liao J, Fukusaki E.

Metabolomics. 2018 Jul 4;14(7):96. doi: 10.1007/s11306-018-1386-0.

PMID:
30830363
12.

Gas chromatography-mass spectrometry metabolomics-based prediction of potato tuber sprouting during long-term storage.

Fukuda T, Takamatsu K, Bamba T, Fukusaki E.

J Biosci Bioeng. 2019 Aug;128(2):249-254. doi: 10.1016/j.jbiosc.2019.01.016. Epub 2019 Feb 8.

PMID:
30745065
13.

Development of a practical online supercritical fluid extraction-supercritical fluid chromatography/mass spectrometry system with an integrated split-flow method.

Sakai M, Hayakawa Y, Funada Y, Ando T, Fukusaki E, Bamba T.

J Chromatogr A. 2019 May 10;1592:161-172. doi: 10.1016/j.chroma.2019.01.044. Epub 2019 Jan 19.

PMID:
30712818
14.

High-sensitive liquid chromatography-tandem mass spectrometry-based chiral metabolic profiling focusing on amino acids and related metabolites.

Nakano Y, Taniguchi M, Fukusaki E.

J Biosci Bioeng. 2019 Apr;127(4):520-527. doi: 10.1016/j.jbiosc.2018.10.003. Epub 2018 Dec 15.

PMID:
30563742
15.

Free D-amino acids produced by commensal bacteria in the colonic lumen.

Matsumoto M, Kunisawa A, Hattori T, Kawana S, Kitada Y, Tamada H, Kawano S, Hayakawa Y, Iida J, Fukusaki E.

Sci Rep. 2018 Dec 17;8(1):17915. doi: 10.1038/s41598-018-36244-z.

16.

Metabolome analysis revealed the knockout of glyoxylate shunt as an effective strategy for improvement of 1-butanol production in transgenic Escherichia coli.

Nitta K, Laviña WA, Pontrelli S, Liao JC, Putri SP, Fukusaki E.

J Biosci Bioeng. 2019 Mar;127(3):301-308. doi: 10.1016/j.jbiosc.2018.08.013. Epub 2018 Oct 25.

PMID:
30482596
17.

Mechanistic study on the high-selectivity enantioseparation of amino acids using a chiral crown ether-bonded stationary phase and acidic, highly organic mobile phase by liquid chromatography/time-of-flight mass spectrometry.

Konya Y, Taniguchi M, Furuno M, Nakano Y, Tanaka N, Fukusaki E.

J Chromatogr A. 2018 Nov 30;1578:35-44. doi: 10.1016/j.chroma.2018.10.004. Epub 2018 Oct 9.

PMID:
30340763
18.

Metabolic repair through emergence of new pathways in Escherichia coli.

Pontrelli S, Fricke RCB, Teoh ST, Laviña WA, Putri SP, Fitz-Gibbon S, Chung M, Pellegrini M, Fukusaki E, Liao JC.

Nat Chem Biol. 2018 Nov;14(11):1005-1009. doi: 10.1038/s41589-018-0149-6. Epub 2018 Oct 16.

PMID:
30327558
19.

Directed strain evolution restructures metabolism for 1-butanol production in minimal media.

Pontrelli S, Fricke RCB, Sakurai SSM, Putri SP, Fitz-Gibbon S, Chung M, Wu HY, Chen YJ, Pellegrini M, Fukusaki E, Liao JC.

Metab Eng. 2018 Sep;49:153-163. doi: 10.1016/j.ymben.2018.08.004. Epub 2018 Aug 11.

PMID:
30107263
20.

Identification of Metabolites Associated with Onset of CAD in Diabetic Patients Using CE-MS Analysis: A Pilot Study.

Omori K, Katakami N, Yamamoto Y, Ninomiya H, Takahara M, Matsuoka TA, Bamba T, Fukusaki E, Shimomura I.

J Atheroscler Thromb. 2019 Mar 1;26(3):233-245. doi: 10.5551/jat.42945. Epub 2018 Aug 1.

21.

Mass Spectrometric Imaging of GABA in the Drosophila melanogaster Adult Head.

Enomoto Y, Nt An P, Yamaguchi M, Fukusaki E, Shimma S.

Anal Sci. 2018 Sep 10;34(9):1055-1059. doi: 10.2116/analsci.18SCN01. Epub 2018 Jul 27.

22.

Metabolomics-based profiling of three terminal alkene-producing Jeotgalicoccus spp. during different growth phase.

Nusantara Putra FJ, Putri SP, Fukusaki E.

J Biosci Bioeng. 2019 Jan;127(1):52-58. doi: 10.1016/j.jbiosc.2018.06.014. Epub 2018 Jul 27.

PMID:
30057157
23.

Highly Accurate Detection and Identification Methodology of Xenobiotic Metabolites Using Stable Isotope Labeling, Data Mining Techniques, and Time-Dependent Profiling Based on LC/HRMS/MS.

Takahashi M, Izumi Y, Iwahashi F, Nakayama Y, Iwakoshi M, Nakao M, Yamato S, Fukusaki E, Bamba T.

Anal Chem. 2018 Aug 7;90(15):9068-9076. doi: 10.1021/acs.analchem.8b01388. Epub 2018 Jul 19.

PMID:
30024726
24.

Iterative cycle of widely targeted metabolic profiling for the improvement of 1-butanol titer and productivity in Synechococcus elongatus.

Fathima AM, Chuang D, Laviña WA, Liao J, Putri SP, Fukusaki E.

Biotechnol Biofuels. 2018 Jul 9;11:188. doi: 10.1186/s13068-018-1187-8. eCollection 2018.

25.

Development of a Visualization Method for Imidacloprid in Drosophila melanogaster via Imaging Mass Spectrometry.

Ohtsu S, Yamaguchi M, Nishiwaki H, Fukusaki E, Shimma S.

Anal Sci. 2018 Sep 10;34(9):991-996. doi: 10.2116/analsci.18SCP04. Epub 2018 Jun 29.

26.

Visualization of Asparaptine in Asparagus (Asparagus officinalis) Using MALDI-IMS.

Miyoshi K, Enomoto Y, Fukusaki E, Shimma S.

Anal Sci. 2018 Sep 10;34(9):997-1001. doi: 10.2116/analsci.18SCP03. Epub 2018 Jun 29.

27.

Metabolomics: State-of-the-Art Technologies and Applications on Drosophila melanogaster.

An PNT, Fukusaki E.

Adv Exp Med Biol. 2018;1076:257-276. doi: 10.1007/978-981-13-0529-0_14. Review.

PMID:
29951824
28.

Hypoxanthine Secretion from Human Adipose Tissue and its Increase in Hypoxia.

Nagao H, Nishizawa H, Tanaka Y, Fukata T, Mizushima T, Furuno M, Bamba T, Tsushima Y, Fujishima Y, Kita S, Funahashi T, Maeda N, Mori M, Fukusaki E, Shimomura I.

Obesity (Silver Spring). 2018 Jul;26(7):1168-1178. doi: 10.1002/oby.22202. Epub 2018 Jun 7.

29.

Gas chromatography coupled with mass spectrometry-based metabolomics for the classification of tempe from different regions and production processes in Indonesia.

Kadar AD, Aditiawati P, Astawan M, Putri SP, Fukusaki E.

J Biosci Bioeng. 2018 Sep;126(3):411-416. doi: 10.1016/j.jbiosc.2018.03.020. Epub 2018 Apr 27.

PMID:
29709442
30.

Metabolomics approach to reduce the Crabtree effect in continuous culture of Saccharomyces cerevisiae.

Imura M, Iwakiri R, Bamba T, Fukusaki E.

J Biosci Bioeng. 2018 Aug;126(2):183-188. doi: 10.1016/j.jbiosc.2018.02.008. Epub 2018 Apr 22.

PMID:
29685822
31.

Adiponectin/T-cadherin system enhances exosome biogenesis and decreases cellular ceramides by exosomal release.

Obata Y, Kita S, Koyama Y, Fukuda S, Takeda H, Takahashi M, Fujishima Y, Nagao H, Masuda S, Tanaka Y, Nakamura Y, Nishizawa H, Funahashi T, Ranscht B, Izumi Y, Bamba T, Fukusaki E, Hanayama R, Shimada S, Maeda N, Shimomura I.

JCI Insight. 2018 Apr 19;3(8). pii: 99680. doi: 10.1172/jci.insight.99680. eCollection 2018 Apr 19.

32.

Molecular Components of Arabidopsis Intact Vacuoles Clarified with Metabolomic and Proteomic Analyses.

Ohnishi M, Anegawa A, Sugiyama Y, Harada K, Oikawa A, Nakayama Y, Matsuda F, Nakamura Y, Sasaki R, Shichijo C, Hatcher PG, Fukaki H, Kanaya S, Aoki K, Yamazaki M, Fukusaki E, Saito K, Mimura T.

Plant Cell Physiol. 2018 Jul 1;59(7):1353-1362. doi: 10.1093/pcp/pcy069.

PMID:
29660082
33.

Microbe participation in aroma production during soy sauce fermentation.

Harada R, Yuzuki M, Ito K, Shiga K, Bamba T, Fukusaki E.

J Biosci Bioeng. 2018 Jun;125(6):688-694. doi: 10.1016/j.jbiosc.2017.12.004. Epub 2018 Feb 1.

PMID:
29366719
34.

Glutamate production from ammonia via glutamate dehydrogenase 2 activity supports cancer cell proliferation under glutamine depletion.

Takeuchi Y, Nakayama Y, Fukusaki E, Irino Y.

Biochem Biophys Res Commun. 2018 Jan 1;495(1):761-767. doi: 10.1016/j.bbrc.2017.11.088. Epub 2017 Nov 14.

PMID:
29146184
35.

Metabolic profiling of Garcinia mangostana (mangosteen) based on ripening stages.

Parijadi AAR, Putri SP, Ridwani S, Dwivany FM, Fukusaki E.

J Biosci Bioeng. 2018 Feb;125(2):238-244. doi: 10.1016/j.jbiosc.2017.08.013. Epub 2017 Sep 29.

PMID:
28970109
36.

Inhibition of Saccharomyces cerevisiae growth by simultaneous uptake of glucose and maltose.

Hatanaka H, Mitsunaga H, Fukusaki E.

J Biosci Bioeng. 2018 Jan;125(1):52-58. doi: 10.1016/j.jbiosc.2017.07.013. Epub 2017 Sep 15.

PMID:
28919251
37.

Development of a split-flow system for high precision variable sample introduction in supercritical fluid chromatography.

Sakai M, Hayakawa Y, Funada Y, Ando T, Fukusaki E, Bamba T.

J Chromatogr A. 2017 Sep 15;1515:218-231. doi: 10.1016/j.chroma.2017.07.077. Epub 2017 Jul 25.

PMID:
28802523
38.

Solid-phase analytical derivatization for gas-chromatography-mass-spectrometry-based metabolomics.

Takeo E, Sasano R, Shimma S, Bamba T, Fukusaki E.

J Biosci Bioeng. 2017 Dec;124(6):700-706. doi: 10.1016/j.jbiosc.2017.07.006. Epub 2017 Aug 8.

PMID:
28800906
39.

Epigenetic regulation of starvation-induced autophagy in Drosophila by histone methyltransferase G9a.

An PNT, Shimaji K, Tanaka R, Yoshida H, Kimura H, Fukusaki E, Yamaguchi M.

Sci Rep. 2017 Aug 4;7(1):7343. doi: 10.1038/s41598-017-07566-1.

40.

Investigation of poly(γ-glutamic acid) production via online determination of viscosity and oxygen transfer rate in shake flasks.

Regestein Née Meissner L, Arndt J, Palmen TG, Jestel T, Mitsunaga H, Fukusaki E, Büchs J.

J Biol Eng. 2017 Jul 12;11:23. doi: 10.1186/s13036-017-0065-4. eCollection 2017.

41.

Orthogonal partial least squares/projections to latent structures regression-based metabolomics approach for identification of gene targets for improvement of 1-butanol production in Escherichia coli.

Nitta K, Laviña WA, Pontrelli S, Liao JC, Putri SP, Fukusaki E.

J Biosci Bioeng. 2017 Nov;124(5):498-505. doi: 10.1016/j.jbiosc.2017.05.015. Epub 2017 Jun 29.

PMID:
28669528
42.

Corrigendum to "Novel high-throughput and widely-targeted liquid chromatography-time of flight mass spectrometry method for d-amino acids in foods" [J. Biosci. Bioeng. 123 (2017) 126-133].

Konya Y, Taniguchi M, Fukusaki E.

J Biosci Bioeng. 2017 Sep;124(3):365-367. doi: 10.1016/j.jbiosc.2017.04.017. Epub 2017 Jun 3. No abstract available.

PMID:
28587733
43.

Investigation of storage time-dependent alterations of enantioselective amino acid profiles in kimchi using liquid chromatography-time of flight mass spectrometry.

Taniguchi M, Konya Y, Nakano Y, Fukusaki E.

J Biosci Bioeng. 2017 Oct;124(4):414-418. doi: 10.1016/j.jbiosc.2017.04.019. Epub 2017 May 27.

PMID:
28566235
44.

Integrated Strategy for Unknown EI-MS Identification Using Quality Control Calibration Curve, Multivariate Analysis, EI-MS Spectral Database, and Retention Index Prediction.

Matsuo T, Tsugawa H, Miyagawa H, Fukusaki E.

Anal Chem. 2017 Jun 20;89(12):6766-6773. doi: 10.1021/acs.analchem.7b01010. Epub 2017 May 26.

PMID:
28520403
45.

Metabolomics-driven approach to solving a CoA imbalance for improved 1-butanol production in Escherichia coli.

Ohtake T, Pontrelli S, Laviña WA, Liao JC, Putri SP, Fukusaki E.

Metab Eng. 2017 May;41:135-143. doi: 10.1016/j.ymben.2017.04.003. Epub 2017 Apr 8.

PMID:
28400330
47.

Distinct signatures of dental plaque metabolic byproducts dictated by periodontal inflammatory status.

Sakanaka A, Kuboniwa M, Hashino E, Bamba T, Fukusaki E, Amano A.

Sci Rep. 2017 Feb 21;7:42818. doi: 10.1038/srep42818.

48.

Effect of Furan Fatty Acids and 3-Methyl-2,4-nonanedione on Light-Induced Off-Odor in Soybean Oil.

Sano T, Okabe R, Iwahashi M, Imagi J, Sato T, Yamashita T, Fukusaki E, Bamba T.

J Agric Food Chem. 2017 Mar 15;65(10):2136-2140. doi: 10.1021/acs.jafc.6b05056. Epub 2017 Feb 28.

PMID:
28215079
49.

Increased Dynamics of Tricarboxylic Acid Cycle and Glutamate Synthesis in Obese Adipose Tissue: IN VIVO METABOLIC TURNOVER ANALYSIS.

Nagao H, Nishizawa H, Bamba T, Nakayama Y, Isozumi N, Nagamori S, Kanai Y, Tanaka Y, Kita S, Fukuda S, Funahashi T, Maeda N, Fukusaki E, Shimomura I.

J Biol Chem. 2017 Mar 17;292(11):4469-4483. doi: 10.1074/jbc.M116.770172. Epub 2017 Jan 24.

50.

Influence of yeast and lactic acid bacterium on the constituent profile of soy sauce during fermentation.

Harada R, Yuzuki M, Ito K, Shiga K, Bamba T, Fukusaki E.

J Biosci Bioeng. 2017 Feb;123(2):203-208. doi: 10.1016/j.jbiosc.2016.08.010. Epub 2016 Dec 7.

PMID:
27939139

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