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Items: 1 to 50 of 67

1.

Draft Genome Sequence of Acidovorax sp. Strain NB1, Isolated from a Nitrite-Oxidizing Enrichment Culture.

Ide H, Ishii K, Fujitani H, Tsuneda S.

Microbiol Resour Announc. 2019 Aug 15;8(33). pii: e00547-19. doi: 10.1128/MRA.00547-19.

2.

Age-related changes in serum periostin level in allergic and non-allergic children.

Fujitani H, Kasuga S, Ishihara T, Higa Y, Fujikawa S, Ohta N, Ono J, Izuhara K, Shintaku H.

Allergol Int. 2019 Apr;68(2):285-286. doi: 10.1016/j.alit.2018.12.006. Epub 2019 Jan 31. No abstract available.

3.

Affinity Improvement of a Cancer-Targeted Antibody through Alanine-Induced Adjustment of Antigen-Antibody Interface.

Yamashita T, Mizohata E, Nagatoishi S, Watanabe T, Nakakido M, Iwanari H, Mochizuki Y, Nakayama T, Kado Y, Yokota Y, Matsumura H, Kawamura T, Kodama T, Hamakubo T, Inoue T, Fujitani H, Tsumoto K.

Structure. 2019 Mar 5;27(3):519-527.e5. doi: 10.1016/j.str.2018.11.002. Epub 2018 Dec 27.

PMID:
30595454
4.

Seabird-affected taluses are denitrification hotspots and potential N2O emitters in the High Arctic.

Hayashi K, Tanabe Y, Ono K, Loonen MJJE, Asano M, Fujitani H, Tokida T, Uchida M, Hayatsu M.

Sci Rep. 2018 Nov 22;8(1):17261. doi: 10.1038/s41598-018-35669-w.

5.

Usefulness of serum biopterin as a predictive biomarker for childhood asthma control: A prospective cohort study.

Kasuga S, Kabata D, Sakaguchi T, Kudoh S, Nishigaki S, Higa Y, Fujikawa S, Fujitani H, Shintani A, Hamazaki T, Shintaku H.

Allergol Int. 2019 Jan;68(1):96-100. doi: 10.1016/j.alit.2018.08.012. Epub 2018 Oct 5.

6.

Genomic Analysis of Two Phylogenetically Distinct Nitrospira Species Reveals Their Genomic Plasticity and Functional Diversity.

Ushiki N, Fujitani H, Shimada Y, Morohoshi T, Sekiguchi Y, Tsuneda S.

Front Microbiol. 2018 Jan 9;8:2637. doi: 10.3389/fmicb.2017.02637. eCollection 2017.

7.

Initiation of prolyl cis-trans isomerisation in the CDR-H3 loop of an antibody in response to antigen binding.

Shinoda K, Fujitani H.

Sci Rep. 2017 Dec 5;7(1):16964. doi: 10.1038/s41598-017-16766-8.

8.

Enrichment and Physiological Characterization of a Cold-Adapted Nitrite-Oxidizing Nitrotoga sp. from an Eelgrass Sediment.

Ishii K, Fujitani H, Soh K, Nakagawa T, Takahashi R, Tsuneda S.

Appl Environ Microbiol. 2017 Jun 30;83(14). pii: e00549-17. doi: 10.1128/AEM.00549-17. Print 2017 Jul 15.

9.

Nitrite oxidation kinetics of two Nitrospira strains: The quest for competition and ecological niche differentiation.

Ushiki N, Jinno M, Fujitani H, Suenaga T, Terada A, Tsuneda S.

J Biosci Bioeng. 2017 May;123(5):581-589. doi: 10.1016/j.jbiosc.2016.12.016. Epub 2017 Feb 13.

PMID:
28202306
10.

Molecular dynamics analysis to evaluate docking pose prediction.

Sakano T, Mahamood MI, Yamashita T, Fujitani H.

Biophys Physicobiol. 2016 Jul 14;13:181-194. eCollection 2016.

11.

Ecophysiology and Comparative Genomics of Nitrosomonas mobilis Ms1 Isolated from Autotrophic Nitrifying Granules of Wastewater Treatment Bioreactor.

Thandar SM, Ushiki N, Fujitani H, Sekiguchi Y, Tsuneda S.

Front Microbiol. 2016 Nov 22;7:1869. eCollection 2016.

12.

Detection and Diversity of the Nitrite Oxidoreductase Alpha Subunit (nxrA) Gene of Nitrospina in Marine Sediments.

Rani S, Koh HW, Rhee SK, Fujitani H, Park SJ.

Microb Ecol. 2017 Jan;73(1):111-122. doi: 10.1007/s00248-016-0897-3. Epub 2016 Nov 22.

PMID:
27878347
13.

A rapid collection of yet unknown ammonia oxidizers in pure culture from activated sludge.

Abe T, Ushiki N, Fujitani H, Tsuneda S.

Water Res. 2017 Jan 1;108:169-178. doi: 10.1016/j.watres.2016.10.070. Epub 2016 Oct 31.

PMID:
27836171
14.

Physical enrichment of uncultured Accumulibacter and Nitrospira from activated sludge by unlabeled cell sorting technique.

Irie K, Fujitani H, Tsuneda S.

J Biosci Bioeng. 2016 Oct;122(4):475-81. doi: 10.1016/j.jbiosc.2016.03.020. Epub 2016 Apr 16.

PMID:
27094955
15.

Conductive resins improve charging and resolution of acquired images in electron microscopic volume imaging.

Nguyen HB, Thai TQ, Saitoh S, Wu B, Saitoh Y, Shimo S, Fujitani H, Otobe H, Ohno N.

Sci Rep. 2016 Mar 29;6:23721. doi: 10.1038/srep23721.

16.

Experimental Approach Reveals the Role of alx1 in the Evolution of the Echinoderm Larval Skeleton.

Koga H, Fujitani H, Morino Y, Miyamoto N, Tsuchimoto J, Shibata TF, Nozawa M, Shigenobu S, Ogura A, Tachibana K, Kiyomoto M, Amemiya S, Wada H.

PLoS One. 2016 Feb 11;11(2):e0149067. doi: 10.1371/journal.pone.0149067. eCollection 2016.

17.

Epiregulin Recognition Mechanisms by Anti-epiregulin Antibody 9E5: STRUCTURAL, FUNCTIONAL, AND MOLECULAR DYNAMICS SIMULATION ANALYSES.

Kado Y, Mizohata E, Nagatoishi S, Iijima M, Shinoda K, Miyafusa T, Nakayama T, Yoshizumi T, Sugiyama A, Kawamura T, Lee YH, Matsumura H, Doi H, Fujitani H, Kodama T, Shibasaki Y, Tsumoto K, Inoue T.

J Biol Chem. 2016 Jan 29;291(5):2319-30. doi: 10.1074/jbc.M115.656009. Epub 2015 Dec 1.

18.

Selective isolation of ammonia-oxidizing bacteria from autotrophic nitrifying granules by applying cell-sorting and sub-culturing of microcolonies.

Fujitani H, Kumagai A, Ushiki N, Momiuchi K, Tsuneda S.

Front Microbiol. 2015 Oct 16;6:1159. doi: 10.3389/fmicb.2015.01159. eCollection 2015.

19.

The feasibility of an efficient drug design method with high-performance computers.

Yamashita T, Ueda A, Mitsui T, Tomonaga A, Matsumoto S, Kodama T, Fujitani H.

Chem Pharm Bull (Tokyo). 2015;63(3):147-55. doi: 10.1248/cpb.c14-00596.

20.

Structural features of interfacial tyrosine residue in ROBO1 fibronectin domain-antibody complex: Crystallographic, thermodynamic, and molecular dynamic analyses.

Nakayama T, Mizohata E, Yamashita T, Nagatoishi S, Nakakido M, Iwanari H, Mochizuki Y, Kado Y, Yokota Y, Satoh R, Tsumoto K, Fujitani H, Kodama T, Hamakubo T, Inoue T.

Protein Sci. 2015 Mar;24(3):328-40. doi: 10.1002/pro.2619. Epub 2015 Jan 13.

21.

Isolation of sublineage I Nitrospira by a novel cultivation strategy.

Fujitani H, Ushiki N, Tsuneda S, Aoi Y.

Environ Microbiol. 2014 Oct;16(10):3030-40. doi: 10.1111/1462-2920.12248. Epub 2013 Sep 24.

PMID:
25312601
22.

Molecular dynamics simulation-based evaluation of the binding free energies of computationally designed drug candidates: importance of the dynamical effects.

Yamashita T, Ueda A, Mitsui T, Tomonaga A, Matsumoto S, Kodama T, Fujitani H.

Chem Pharm Bull (Tokyo). 2014;62(7):661-7.

23.

Isolation of Nitrospira belonging to sublineage II from a wastewater treatment plant.

Ushiki N, Fujitani H, Aoi Y, Tsuneda S.

Microbes Environ. 2013;28(3):346-53. Epub 2013 Sep 4.

24.
25.

Functional evolution of Ets in echinoderms with focus on the evolution of echinoderm larval skeletons.

Koga H, Matsubara M, Fujitani H, Miyamoto N, Komatsu M, Kiyomoto M, Akasaka K, Wada H.

Dev Genes Evol. 2010 Sep;220(3-4):107-15. doi: 10.1007/s00427-010-0333-5. Epub 2010 Aug 3.

PMID:
20680330
26.

Docking study and binding free energy calculation of poly (ADP-ribose) polymerase inhibitors.

Ohno K, Mitsui T, Tanida Y, Matsuura A, Fujitani H, Niimi T, Orita M.

J Mol Model. 2011 Feb;17(2):383-9. doi: 10.1007/s00894-010-0728-2. Epub 2010 May 18.

PMID:
20480380
27.

Massively parallel computation of absolute binding free energy with well-equilibrated states.

Fujitani H, Tanida Y, Matsuura A.

Phys Rev E Stat Nonlin Soft Matter Phys. 2009 Feb;79(2 Pt 1):021914. Epub 2009 Feb 26.

PMID:
19391785
28.

High-Level ab Initio Calculations To Improve Protein Backbone Dihedral Parameters.

Fujitani H, Matsuura A, Sakai S, Sato H, Tanida Y.

J Chem Theory Comput. 2009 Apr 14;5(4):1155-65. doi: 10.1021/ct8005437.

PMID:
26609625
29.

The Complete Sequence of Mitochondrial Genome from a Gynogenetic Triploid "Ginbuna" (Carassius auratus langsdorfi).

Murakami M, Yamashita Y, Fujitani H.

Zoolog Sci. 1998 Jun 1;15(3):335-7. doi: 10.2108/zsj.15.335.

PMID:
18465995
30.

Large volume loading to prevent cisplatin-induced nephrotoxicity during negative-balance isolated pelvic perfusion.

Nakazato K, Kim C, Terajima K, Murata S, Fujitani H, Nakanishi K, Tajima H, Kumazaki T, Sakamoto A.

J Cancer Res Clin Oncol. 2007 Oct;133(10):741-7. Epub 2007 May 15.

PMID:
17503082
31.

Direct calculation of the binding free energies of FKBP ligands.

Fujitani H, Tanida Y, Ito M, Jayachandran G, Snow CD, Shirts MR, Sorin EJ, Pande VS.

J Chem Phys. 2005 Aug 22;123(8):084108.

PMID:
16164283
32.

Nucleotide sequence and expression of a cDNA encoding canine carbonic anhydrase VI (CA-VI).

Murakami M, Kasuya T, Matsuba C, Ichihara N, Nishita T, Fujitani H, Asari M.

DNA Seq. 2003 Jun;14(3):195-8.

PMID:
14509831
33.
34.

Development of species-specific PCR techniques for the detection of tortoise herpesvirus.

Murakami M, Matsuba C, Une Y, Nomura Y, Fujitani H.

J Vet Diagn Invest. 2001 Nov;13(6):513-6.

PMID:
11724143
35.

Nucleotide sequence and polymerase chain reaction/restriction fragment length polymorphism analyses of Aleutian disease virus in ferrets in Japan.

Murakami M, Matsuba C, Une Y, Nomura Y, Fujitani H.

J Vet Diagn Invest. 2001 Jul;13(4):337-40.

PMID:
11478607
36.

Reliable sex identification of dogs by modified PCR/RFLP analysis.

Murakami M, Fujise H, Lee YS, Matsuba C, Fujitani H.

J Vet Med Sci. 2001 Jun;63(6):679-81.

38.

Polymerase chain reaction (PCR) for the detection of herpesvirus in tortoises.

Une Y, Murakami M, Uemura K, Fujitani H, Ishibashi T, Nomura Y.

J Vet Med Sci. 2000 Aug;62(8):905-7.

42.

Full-potential total-energy investigation on the lattice relaxation at the two types of NiSi2/Si(111) interface.

Fujitani H, Asano S.

Phys Rev B Condens Matter. 1995 Jun 15;51(24):18019-18021. No abstract available.

PMID:
9978845
43.

Full-potential band calculations on YTiO3 with a distorted perovskite structure.

Fujitani H, Asano S.

Phys Rev B Condens Matter. 1995 Jan 15;51(4):2098-2102. No abstract available.

PMID:
9978953
44.

Schottky-barrier height and electronic structure of the Si interface with metal silicides: CoSi2, NiSi2, and YSi2.

Fujitani H, Asano S.

Phys Rev B Condens Matter. 1994 Sep 15;50(12):8681-8698. No abstract available.

PMID:
9974888
45.

Schottky barriers at NiSi2/Si(111) interfaces.

Fujitani H, Asano S.

Phys Rev B Condens Matter. 1990 Jul 15;42(3):1696-1704. No abstract available.

PMID:
9995600
46.

Comparison of primary and secondary 26S rRNA structures in two Tetrahymena species: evidence for a strong evolutionary and structural constraint in expansion segments.

Engberg J, Nielsen H, Lenaers G, Murayama O, Fujitani H, Higashinakagawa T.

J Mol Evol. 1990 Jun;30(6):514-21.

PMID:
2115930
47.

Fermi-level pinning and interface states at CaF2/Si(111).

Fujitani H, Asano S.

Phys Rev B Condens Matter. 1989 Oct 15;40(12):8357-8362. No abstract available.

PMID:
9991295
48.

Effects of quaternary ammonium compounds on the degradation of lipids in lysosomes.

Matsumoto Y, Watanabe T, Suga T, Fujitani H.

J Pharmacobiodyn. 1989 Feb;12(2):113-7.

PMID:
2746450
49.

Inhibitory effects of quaternary ammonium compounds on lysosomal degradation of endogenous proteins.

Matsumoto Y, Watanabe T, Suga T, Fujitani H.

Chem Pharm Bull (Tokyo). 1989 Feb;37(2):516-8.

PMID:
2743503
50.

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