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Items: 1 to 50 of 270

1.

A Nearly Complete Genome of Ciona intestinalis Type A (C. robusta) Reveals the Contribution of Inversion to Chromosomal Evolution in the Genus Ciona.

Satou Y, Nakamura R, Yu D, Yoshida R, Hamada M, Fujie M, Hisata K, Takeda H, Satoh N.

Genome Biol Evol. 2019 Nov 1;11(11):3144-3157. doi: 10.1093/gbe/evz228.

2.

Prediction Algorithm of Parameters of Toe Clearance in the Swing Phase.

Miyake T, Fujie MG, Sugano S.

Appl Bionics Biomech. 2019 Aug 14;2019:4502719. doi: 10.1155/2019/4502719. eCollection 2019.

3.

Publisher Correction: Medusozoan genomes inform the evolution of the jellyfish body plan.

Khalturin K, Shinzato C, Khalturina M, Hamada M, Fujie M, Koyanagi R, Kanda M, Goto H, Anton-Erxleben F, Toyokawa M, Toshino S, Satoh N.

Nat Ecol Evol. 2019 Jun;3(6):989. doi: 10.1038/s41559-019-0905-3.

PMID:
31048744
4.

Medusozoan genomes inform the evolution of the jellyfish body plan.

Khalturin K, Shinzato C, Khalturina M, Hamada M, Fujie M, Koyanagi R, Kanda M, Goto H, Anton-Erxleben F, Toyokawa M, Toshino S, Satoh N.

Nat Ecol Evol. 2019 May;3(5):811-822. doi: 10.1038/s41559-019-0853-y. Epub 2019 Apr 15. Erratum in: Nat Ecol Evol. 2019 Jun;3(6):989.

PMID:
30988488
5.

Using Brain Activation to Evaluate Arrangements Aiding Hand-Eye Coordination in Surgical Robot Systems.

Miura S, Kawamura K, Kobayashi Y, Fujie MG.

IEEE Trans Biomed Eng. 2019 Aug;66(8):2352-2361. doi: 10.1109/TBME.2018.2889316. Epub 2018 Dec 24.

PMID:
30582521
6.

Evaluation of Compensatory Movement by Shoulder Joint Torque during Gain Adjustment of a Powered Prosthetic Wrist Joint.

Kato A, Nagumo H, Tamon M, Fujie MG, Sugano S.

Conf Proc IEEE Eng Med Biol Soc. 2018 Jul;2018:1891-1894. doi: 10.1109/EMBC.2018.8512594.

PMID:
30440766
7.

Symbiotic bacteria associated with ascidian vanadium accumulation identified by 16S rRNA amplicon sequencing.

Ueki T, Fujie M, Romaidi, Satoh N.

Mar Genomics. 2019 Feb;43:33-42. doi: 10.1016/j.margen.2018.10.006. Epub 2018 Nov 9.

8.

Correction to: Full genome sequence of a polyvalent bacteriophage infecting strains of Shigella, Salmonella, and Escherichia.

Saad AM, Askora A, Soliman AM, Nariya H, Kawasaki T, Fujie M, Shimamoto T, Yamada T.

Arch Virol. 2018 Nov;163(11):3211. doi: 10.1007/s00705-018-3998-0.

PMID:
30132137
9.

Full genome sequence of a polyvalent bacteriophage infecting strains of Shigella, Salmonella, and Escherichia.

Saad AM, Askora A, Soliman AM, Nariya H, Kawasaki T, Fujie M, Shimamoto T, Yamada T.

Arch Virol. 2018 Nov;163(11):3207-3210. doi: 10.1007/s00705-018-3971-y. Epub 2018 Jul 28. Erratum in: Arch Virol. 2018 Aug 22;:. Soliman AM [added], Nariya H [added], Shimamoto T [added].

PMID:
30056554
10.

The habu genome reveals accelerated evolution of venom protein genes.

Shibata H, Chijiwa T, Oda-Ueda N, Nakamura H, Yamaguchi K, Hattori S, Matsubara K, Matsuda Y, Yamashita A, Isomoto A, Mori K, Tashiro K, Kuhara S, Yamasaki S, Fujie M, Goto H, Koyanagi R, Takeuchi T, Fukumaki Y, Ohno M, Shoguchi E, Hisata K, Satoh N, Ogawa T.

Sci Rep. 2018 Jul 26;8(1):11300. doi: 10.1038/s41598-018-28749-4.

11.

Systemic method to isolate large bacteriophages for use in biocontrol of a wide-range of pathogenic bacteria.

Saad AM, Soliman AM, Kawasaki T, Fujie M, Nariya H, Shimamoto T, Yamada T.

J Biosci Bioeng. 2019 Jan;127(1):73-78. doi: 10.1016/j.jbiosc.2018.07.001. Epub 2018 Jul 23.

PMID:
30049605
12.

Efficacy of End-Tidal Capnography Monitoring during Flexible Bronchoscopy in Nonintubated Patients under Sedation: A Randomized Controlled Study.

Ishiwata T, Tsushima K, Terada J, Fujie M, Abe M, Ikari J, Kawata N, Tada Y, Tatsumi K.

Respiration. 2018;96(4):355-362. doi: 10.1159/000489888. Epub 2018 Jun 28.

13.

Real-time Endoscopy-Guided Measurement of Rectal Mucosal Admittance Is a Novel and Safe Method for Predicting Ulcerative Colitis Relapse.

Taida T, Arai M, Fujie M, Akizue N, Ishikawa K, Ohta Y, Hamanaka S, Ishigami H, Okimoto K, Saito K, Maruoka D, Matsumura T, Nakagawa T, Katsuno T, Kato N.

Inflamm Bowel Dis. 2018 Oct 12;24(11):2360-2365. doi: 10.1093/ibd/izy191.

PMID:
29931368
14.

Two divergent Symbiodinium genomes reveal conservation of a gene cluster for sunscreen biosynthesis and recently lost genes.

Shoguchi E, Beedessee G, Tada I, Hisata K, Kawashima T, Takeuchi T, Arakaki N, Fujie M, Koyanagi R, Roy MC, Kawachi M, Hidaka M, Satoh N, Shinzato C.

BMC Genomics. 2018 Jun 14;19(1):458. doi: 10.1186/s12864-018-4857-9.

15.

Quantitative assessment of the effects of outside temperature on farrowing rate in gilts and sows by using a multivariate logistic regression model.

Sasaki Y, Fujie M, Nakatake S, Kawabata T.

Anim Sci J. 2018 Aug;89(8):1187-1193. doi: 10.1111/asj.13048. Epub 2018 May 29.

PMID:
29808521
16.

Unprecedented Cyclization Catalyzed by a Cytochrome P450 in Benzastatin Biosynthesis.

Tsutsumi H, Katsuyama Y, Izumikawa M, Takagi M, Fujie M, Satoh N, Shin-Ya K, Ohnishi Y.

J Am Chem Soc. 2018 May 30;140(21):6631-6639. doi: 10.1021/jacs.8b02769. Epub 2018 May 21.

PMID:
29716187
17.

Comparative transcriptomics with self-organizing map reveals cryptic photosynthetic differences between two accessions of North American Lake cress.

Nakayama H, Sakamoto T, Okegawa Y, Kaminoyama K, Fujie M, Ichihashi Y, Kurata T, Motohashi K, Al-Shehbaz I, Sinha N, Kimura S.

Sci Rep. 2018 Feb 19;8(1):3302. doi: 10.1038/s41598-018-21646-w.

18.

Evaluation of Esophageal Mucosal Integrity in Patients with Gastroesophageal Reflux Disease.

Matsumura T, Arai M, Ishigami H, Fujie M, Ishikawa K, Akizue N, Taida T, Ohta Y, Hamanaka S, Okimoto K, Saito K, Maruoka D, Nakagawa T, Kato N.

Digestion. 2018;97(1):31-37. doi: 10.1159/000484106. Epub 2018 Feb 1. Review.

19.

Neothioviridamide, a Polythioamide Compound Produced by Heterologous Expression of a Streptomyces sp. Cryptic RiPP Biosynthetic Gene Cluster.

Kawahara T, Izumikawa M, Kozone I, Hashimoto J, Kagaya N, Koiwai H, Komatsu M, Fujie M, Sato N, Ikeda H, Shin-Ya K.

J Nat Prod. 2018 Feb 23;81(2):264-269. doi: 10.1021/acs.jnatprod.7b00607. Epub 2018 Jan 30.

PMID:
29381067
20.

Lysogenic Conversion of the Phytopathogen Ralstonia solanacearum by the P2virus ϕRSY1.

Askora A, Kawasaki T, Fujie M, Yamada T.

Front Microbiol. 2017 Nov 14;8:2212. doi: 10.3389/fmicb.2017.02212. eCollection 2017.

21.

Accuracy to detection timing for assisting repetitive facilitation exercise system using MRCP and SVM.

Miura S, Takazawa J, Kobayashi Y, Fujie MG.

Robotics Biomim. 2017;4(1):12. doi: 10.1186/s40638-017-0071-5. Epub 2017 Nov 7.

22.

Dynamic integration and excision of filamentous phage XacF1 in Xanthomonas citri pv. citri, the causative agent of citrus canker disease.

Ahmad AA, Kawabe M, Askora A, Kawasaki T, Fujie M, Yamada T.

FEBS Open Bio. 2017 Sep 19;7(11):1715-1721. doi: 10.1002/2211-5463.12312. eCollection 2017 Nov.

23.

Chitin synthesis by Chlorella cells infected by chloroviruses: Enhancement by adopting a slow-growing virus and treatment with aphidicolin.

Rakkhumkaew N, Kawasaki T, Fujie M, Yamada T.

J Biosci Bioeng. 2018 Mar;125(3):311-315. doi: 10.1016/j.jbiosc.2017.10.002. Epub 2017 Nov 1.

PMID:
29100685
24.

Small genome symbiont underlies cuticle hardness in beetles.

Anbutsu H, Moriyama M, Nikoh N, Hosokawa T, Futahashi R, Tanahashi M, Meng XY, Kuriwada T, Mori N, Oshima K, Hattori M, Fujie M, Satoh N, Maeda T, Shigenobu S, Koga R, Fukatsu T.

Proc Natl Acad Sci U S A. 2017 Oct 3;114(40):E8382-E8391. doi: 10.1073/pnas.1712857114. Epub 2017 Sep 18.

25.

Change detection technique for muscle tone during static stretching by continuous muscle viscoelasticity monitoring using wearable indentation tester.

Okamura N, Kobayashi Y, Sugano S, Fujie MG.

IEEE Int Conf Rehabil Robot. 2017 Jul;2017:1686-1691. doi: 10.1109/ICORR.2017.8009490.

PMID:
28814062
26.

Timing of intermittent torque control with wire-driven gait training robot lifting toe trajectory for trip avoidance.

Miyake T, Kobayashi Y, Fujie MG, Sugano S.

IEEE Int Conf Rehabil Robot. 2017 Jul;2017:320-325. doi: 10.1109/ICORR.2017.8009267.

PMID:
28813839
27.

A novel optimal coordinated control strategy for the updated robot system for single port surgery.

Bai W, Cao Q, Leng C, Cao Y, Fujie MG, Pan T.

Int J Med Robot. 2017 Sep;13(3). doi: 10.1002/rcs.1844. Epub 2017 Jul 30.

PMID:
28758326
28.

Replications of Two Closely Related Groups of Jumbo Phages Show Different Level of Dependence on Host-encoded RNA Polymerase.

Matsui T, Yoshikawa G, Mihara T, Chatchawankanphanich O, Kawasaki T, Nakano M, Fujie M, Ogata H, Yamada T.

Front Microbiol. 2017 Jun 13;8:1010. doi: 10.3389/fmicb.2017.01010. eCollection 2017.

29.

Endoscopic-Guided Measurement of Mucosal Admittance can Discriminate Gastroesophageal Reflux Disease from Functional Heartburn.

Matsumura T, Ishigami H, Fujie M, Taida T, Kasamatsu S, Okimoto K, Saito K, Maruoka D, Nakagawa T, Suzuki T, Katsuno T, Arai M.

Clin Transl Gastroenterol. 2017 Jun 1;8(6):e94. doi: 10.1038/ctg.2017.22.

30.

Development of angle information system to facilitate the adjustment of needle-holding posture.

Cao Y, Liu L, Miura S, Seki M, Kobayashi Y, Kawamura K, Fujie MG.

Int J Comput Assist Radiol Surg. 2017 Nov;12(11):2003-2013. doi: 10.1007/s11548-017-1617-2. Epub 2017 May 29.

PMID:
28555446
31.

Three-dimensional imaging system for colonoscopy.

Matsumura T, Ishigami H, Okimoto K, Maruoka D, Nakagawa T, Fujie M, Arai M.

Endoscopy. 2017 Jul;49(7):716-717. doi: 10.1055/s-0043-105572. Epub 2017 May 19. No abstract available.

PMID:
28525930
32.

Endoscopy-Guided Evaluation of Duodenal Mucosal Permeability in Functional Dyspepsia.

Ishigami H, Matsumura T, Kasamatsu S, Hamanaka S, Taida T, Okimoto K, Saito K, Minemura S, Maruoka D, Nakagawa T, Katsuno T, Fujie M, Arai M.

Clin Transl Gastroenterol. 2017 Apr 6;8(4):e83. doi: 10.1038/ctg.2017.12.

33.

The crown-of-thorns starfish genome as a guide for biocontrol of this coral reef pest.

Hall MR, Kocot KM, Baughman KW, Fernandez-Valverde SL, Gauthier MEA, Hatleberg WL, Krishnan A, McDougall C, Motti CA, Shoguchi E, Wang T, Xiang X, Zhao M, Bose U, Shinzato C, Hisata K, Fujie M, Kanda M, Cummins SF, Satoh N, Degnan SM, Degnan BM.

Nature. 2017 Apr 5;544(7649):231-234. doi: 10.1038/nature22033.

PMID:
28379940
34.

The Effect of Ineffective Esophageal Motility on Gastroesophageal Reflux Disease.

Kasamatsu S, Matsumura T, Ohta Y, Hamanaka S, Ishigami H, Taida T, Okimoto K, Saito K, Maruoka D, Nakagawa T, Katsuno T, Fujie M, Kikuchi A, Arai M.

Digestion. 2017;95(3):221-228. doi: 10.1159/000468925. Epub 2017 Mar 25.

PMID:
28343226
35.

Simple empirical model for identifying rheological properties of soft biological tissues.

Kobayashi Y, Tsukune M, Miyashita T, Fujie MG.

Phys Rev E. 2017 Feb;95(2-1):022418. doi: 10.1103/PhysRevE.95.022418. Epub 2017 Feb 28.

PMID:
28297883
36.

Relationship between magnitude of applied torque in pre-swing phase and gait change for prevention of trip in elderly people.

Miyake T, Tsukune M, Kobayashi Y, Sugano S, Fujie MG.

Conf Proc IEEE Eng Med Biol Soc. 2016 Aug;2016:6154-6157. doi: 10.1109/EMBC.2016.7592133.

PMID:
28269657
37.

End-tidal capnographic monitoring to detect apnea episodes during flexible bronchoscopy under sedation.

Ishiwata T, Tsushima K, Fujie M, Suzuki K, Hirota K, Abe M, Kawata N, Terada J, Tatsumi K.

BMC Pulm Med. 2017 Jan 7;17(1):7. doi: 10.1186/s12890-016-0361-7.

38.

Obligate bacterial mutualists evolving from environmental bacteria in natural insect populations.

Hosokawa T, Ishii Y, Nikoh N, Fujie M, Satoh N, Fukatsu T.

Nat Microbiol. 2016 Jan 11;1:15011. doi: 10.1038/nmicrobiol.2015.11.

PMID:
27571756
39.

A draft genome of the brown alga, Cladosiphon okamuranus, S-strain: a platform for future studies of 'mozuku' biology.

Nishitsuji K, Arimoto A, Iwai K, Sudo Y, Hisata K, Fujie M, Arakaki N, Kushiro T, Konishi T, Shinzato C, Satoh N, Shoguchi E.

DNA Res. 2016 Dec;23(6):561-570. Epub 2016 Aug 8.

40.

Production of a Novel Amide-Containing Polyene by Activating a Cryptic Biosynthetic Gene Cluster in Streptomyces sp. MSC090213JE08.

Du D, Katsuyama Y, Onaka H, Fujie M, Satoh N, Shin-Ya K, Ohnishi Y.

Chembiochem. 2016 Aug 3;17(15):1464-71. doi: 10.1002/cbic.201600167. Epub 2016 Jun 17.

PMID:
27311327
41.

Involvement of the Baeyer-Villiger Monooxygenase IfnQ in the Biosynthesis of Isofuranonaphthoquinone Scaffold of JBIR-76 and -77.

Katsuyama Y, Sone K, Satou R, Izumikawa M, Takagi M, Fujie M, Satoh N, Shin-Ya K, Ohnishi Y.

Chembiochem. 2016 Jun 2;17(11):1021-8. doi: 10.1002/cbic.201600095. Epub 2016 May 9.

PMID:
27158812
42.

Two asian jumbo phages, ϕRSL2 and ϕRSF1, infect Ralstonia solanacearum and show common features of ϕKZ-related phages.

Bhunchoth A, Blanc-Mathieu R, Mihara T, Nishimura Y, Askora A, Phironrit N, Leksomboon C, Chatchawankanphanich O, Kawasaki T, Nakano M, Fujie M, Ogata H, Yamada T.

Virology. 2016 Jul;494:56-66. doi: 10.1016/j.virol.2016.03.028. Epub 2016 Apr 12.

43.

Use of Fentanyl Patch for Treatment of Moderate-to-severe Chronic Noncancer Pain: Postmarketing Surveillance of Medical Practice in Japan Using a Risk Minimization Action Plan.

Kawai K, Yoshizawa K, Fujie M, Kobayashi H, Ogawa Y, Yajima T.

Pain Pract. 2017 Feb;17(2):239-248. doi: 10.1111/papr.12454. Epub 2016 Apr 15.

PMID:
27080988
44.

Virtually transparent surgical instruments in endoscopic surgery with augmentation of obscured regions.

Koreeda Y, Kobayashi Y, Ieiri S, Nishio Y, Kawamura K, Obata S, Souzaki R, Hashizume M, Fujie MG.

Int J Comput Assist Radiol Surg. 2016 Oct;11(10):1927-36. doi: 10.1007/s11548-016-1384-5. Epub 2016 Apr 2.

PMID:
27038964
45.

Estimation of minimal clinically important change of the Japanese version of EQ-5D in patients with chronic noncancer pain: a retrospective research using real-world data.

Yoshizawa K, Kobayashi H, Fujie M, Ogawa Y, Yajima T, Kawai K.

Health Qual Life Outcomes. 2016 Mar 1;14:35. doi: 10.1186/s12955-016-0438-2.

46.

Genomic diversity of large-plaque-forming podoviruses infecting the phytopathogen Ralstonia solanacearum.

Kawasaki T, Narulita E, Matsunami M, Ishikawa H, Shimizu M, Fujie M, Bhunchoth A, Phironrit N, Chatchawankanphanich O, Yamada T.

Virology. 2016 May;492:73-81. doi: 10.1016/j.virol.2016.02.011. Epub 2016 Feb 19.

47.

Bivalve-specific gene expansion in the pearl oyster genome: implications of adaptation to a sessile lifestyle.

Takeuchi T, Koyanagi R, Gyoja F, Kanda M, Hisata K, Fujie M, Goto H, Yamasaki S, Nagai K, Morino Y, Miyamoto H, Endo K, Endo H, Nagasawa H, Kinoshita S, Asakawa S, Watabe S, Satoh N, Kawashima T.

Zoological Lett. 2016 Feb 18;2:3. doi: 10.1186/s40851-016-0039-2. eCollection 2016.

48.

Method for estimating the temperature distribution associated with the vessel cooling effect in radio frequency ablation.

Lu X, Kikuchi H, Hirooka K, Isobe Y, Watanabe H, Kobayashi Y, Miyashita T, Fujie MG.

Conf Proc IEEE Eng Med Biol Soc. 2015 Aug;2015:4836-9. doi: 10.1109/EMBC.2015.7319476.

PMID:
26737376
49.

A robotic gait training system integrating split-belt treadmill, footprint sensing and synchronous EEG recording for neuro-motor recovery.

Liu YH, Zhang B, Liu Q, Hsu WC, Hsiao YT, Su JY, Kobayashi Y, Fujie MG.

Conf Proc IEEE Eng Med Biol Soc. 2015 Aug;2015:3573-7. doi: 10.1109/EMBC.2015.7319165.

PMID:
26737065
50.

Visual and somatic sensory feedback of brain activity for intuitive surgical robot manipulation.

Miura S, Matsumoto Y, Kobayashi Y, Kawamura K, Nakashima Y, Fujie MG.

Conf Proc IEEE Eng Med Biol Soc. 2015;2015:17-20. doi: 10.1109/EMBC.2015.7318250.

PMID:
26736190

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