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Evolutionary Stability of Salmonella Competition with the Gut Microbiota: How the Environment Fosters Heterogeneity in Exploitative and Interference Competition.

Müller J, Spriewald S, Stecher B, Stadler E, Fuchs TM.

J Mol Biol. 2019 Jun 28. pii: S0022-2836(19)30416-4. doi: 10.1016/j.jmb.2019.06.027. [Epub ahead of print] Review.


N-Doping at the Sub-Nanoscale: Dielectric and Magnetic Response of Neutral Phosphorus-Doped Tin Clusters.

Gleditzsch M, Fuchs TM, Schäfer R.

J Phys Chem A. 2019 Feb 21;123(7):1434-1444. doi: 10.1021/acs.jpca.8b12049. Epub 2019 Feb 8.


Direct pathway cloning of the sodorifen biosynthetic gene cluster and recombinant generation of its product in E. coli.

Duell ER, D'Agostino PM, Shapiro N, Woyke T, Fuchs TM, Gulder TAM.

Microb Cell Fact. 2019 Feb 7;18(1):32. doi: 10.1186/s12934-019-1080-6.


The small RNA RssR regulates myo-inositol degradation by Salmonella enterica.

Kröger C, Rothhardt JE, Brokatzky D, Felsl A, Kary SC, Heermann R, Fuchs TM.

Sci Rep. 2018 Dec 10;8(1):17739. doi: 10.1038/s41598-018-35784-8.


Insecticidal Toxicity of Yersinia frederiksenii Involves the Novel Enterotoxin YacT.

Springer K, Sänger PA, Moritz C, Felsl A, Rattei T, Fuchs TM.

Front Cell Infect Microbiol. 2018 Nov 14;8:392. doi: 10.3389/fcimb.2018.00392. eCollection 2018.


Activity of a Holin-Endolysin System in the Insecticidal Pathogenicity Island of Yersinia enterocolitica.

Springer K, Reuter S, Knüpfer M, Schmauder L, Sänger PA, Felsl A, Fuchs TM.

J Bacteriol. 2018 Jul 25;200(16). pii: e00180-18. doi: 10.1128/JB.00180-18. Print 2018 Aug 15.


Comparison between Listeria sensu stricto and Listeria sensu lato strains identifies novel determinants involved in infection.

Schardt J, Jones G, Müller-Herbst S, Schauer K, D'Orazio SEF, Fuchs TM.

Sci Rep. 2017 Dec 19;7(1):17821. doi: 10.1038/s41598-017-17570-0.


High binding affinity of repressor IolR avoids costs of untimely induction of myo-inositol utilization by Salmonella Typhimurium.

Hellinckx J, Heermann R, Felsl A, Fuchs TM.

Sci Rep. 2017 Mar 14;7:44362. doi: 10.1038/srep44362.


Hysteresis in myo-inositol utilization by Salmonella Typhimurium.

Hellinckx J, Fuchs TM.

Microbiologyopen. 2017 Apr;6(2). doi: 10.1002/mbo3.431. Epub 2016 Dec 27.


Genetic Characterization of the Galactitol Utilization Pathway of Salmonella enterica Serovar Typhimurium.

Nolle N, Felsl A, Heermann R, Fuchs TM.

J Bacteriol. 2017 Jan 30;199(4). pii: e00595-16. doi: 10.1128/JB.00595-16. Print 2017 Feb 15.


Natural-Product-Inspired Aminoepoxybenzoquinones Kill Members of the Gram-Negative Pathogen Salmonella by Attenuating Cellular Stress Response.

Mandl FA, Kirsch VC, Ugur I, Kunold E, Vomacka J, Fetzer C, Schneider S, Richter K, Fuchs TM, Antes I, Sieber SA.

Angew Chem Int Ed Engl. 2016 Nov 14;55(47):14852-14857. doi: 10.1002/anie.201607338. Epub 2016 Oct 26.


Isotopologue profiling of the listerial N-metabolism.

Kutzner E, Kern T, Felsl A, Eisenreich W, Fuchs TM.

Mol Microbiol. 2016 Apr;100(2):315-27. doi: 10.1111/mmi.13318. Epub 2016 Feb 12.


Regulation of fucose and 1,2-propanediol utilization by Salmonella enterica serovar Typhimurium.

Staib L, Fuchs TM.

Front Microbiol. 2015 Oct 12;6:1116. doi: 10.3389/fmicb.2015.01116. eCollection 2015.


Pathogen-nematode interaction: Nitrogen supply of Listeria monocytogenes during growth in Caenorhabditis elegans.

Kern T, Kutzner E, Eisenreich W, Fuchs TM.

Environ Microbiol Rep. 2016 Feb;8(1):20-9. doi: 10.1111/1758-2229.12344. Epub 2015 Dec 21.


Analysis of carbon substrates used by Listeria monocytogenes during growth in J774A.1 macrophages suggests a bipartite intracellular metabolism.

Grubmüller S, Schauer K, Goebel W, Fuchs TM, Eisenreich W.

Front Cell Infect Microbiol. 2014 Nov 3;4:156. doi: 10.3389/fcimb.2014.00156. eCollection 2014.


The orphan regulator ReiD of Salmonella enterica is essential for myo-inositol utilization.

Rothhardt JE, Kröger C, Broadley SP, Fuchs TM.

Mol Microbiol. 2014 Nov;94(3):700-12. doi: 10.1111/mmi.12788. Epub 2014 Oct 6.


Parallel independent evolution of pathogenicity within the genus Yersinia.

Reuter S, Connor TR, Barquist L, Walker D, Feltwell T, Harris SR, Fookes M, Hall ME, Petty NK, Fuchs TM, Corander J, Dufour M, Ringwood T, Savin C, Bouchier C, Martin L, Miettinen M, Shubin M, Riehm JM, Laukkanen-Ninios R, Sihvonen LM, Siitonen A, Skurnik M, Falcão JP, Fukushima H, Scholz HC, Prentice MB, Wren BW, Parkhill J, Carniel E, Achtman M, McNally A, Thomson NR.

Proc Natl Acad Sci U S A. 2014 May 6;111(18):6768-73. doi: 10.1073/pnas.1317161111. Epub 2014 Apr 21.


From food to cell: nutrient exploitation strategies of enteropathogens.

Staib L, Fuchs TM.

Microbiology. 2014 Jun;160(Pt 6):1020-1039. doi: 10.1099/mic.0.078105-0. Epub 2014 Apr 4. Review.


YmoA negatively controls the expression of insecticidal genes in Yersinia enterocolitica.

Starke M, Fuchs TM.

Mol Microbiol. 2014 Apr;92(2):287-301. doi: 10.1111/mmi.12554. Epub 2014 Mar 13.


Bet-hedging in stochastically switching environments.

Müller J, Hense BA, Fuchs TM, Utz M, Pötzsche Ch.

J Theor Biol. 2013 Nov 7;336:144-57. doi: 10.1016/j.jtbi.2013.07.017. Epub 2013 Jul 27.


The insecticidal toxin genes of Yersinia enterocolitica are activated by the thermolabile LTTR-like regulator TcaR2 at low temperatures.

Starke M, Richter M, Fuchs TM.

Mol Microbiol. 2013 Aug;89(4):596-611. doi: 10.1111/mmi.12296. Epub 2013 Jul 16.


Acid shock of Listeria monocytogenes at low environmental temperatures induces prfA, epithelial cell invasion, and lethality towards Caenorhabditis elegans.

Neuhaus K, Satorhelyi P, Schauer K, Scherer S, Fuchs TM.

BMC Genomics. 2013 Apr 27;14:285. doi: 10.1186/1471-2164-14-285.


Toward a Systemic Understanding of Listeria monocytogenes Metabolism during Infection.

Fuchs TM, Eisenreich W, Kern T, Dandekar T.

Front Microbiol. 2012 Feb 3;3:23. doi: 10.3389/fmicb.2012.00023. eCollection 2012.


Metabolic adaptation of human pathogenic and related nonpathogenic bacteria to extra- and intracellular habitats.

Fuchs TM, Eisenreich W, Heesemann J, Goebel W.

FEMS Microbiol Rev. 2012 Mar;36(2):435-62. doi: 10.1111/j.1574-6976.2011.00301.x. Epub 2011 Sep 14. Review.


Thiamine plays a critical role in the acid tolerance of Listeria monocytogenes.

Madeo M, O'Riordan N, Fuchs TM, Utratna M, Karatzas KA, O'Byrne CP.

FEMS Microbiol Lett. 2012 Jan;326(2):137-43. doi: 10.1111/j.1574-6968.2011.02442.x. Epub 2011 Nov 14.


Bistability in myo-inositol utilization by Salmonella enterica serovar Typhimurium.

Kröger C, Srikumar S, Ellwart J, Fuchs TM.

J Bacteriol. 2011 Mar;193(6):1427-35. doi: 10.1128/JB.00043-10. Epub 2011 Jan 14.


gcpA (stm1987) is critical for cellulose production and biofilm formation on polystyrene surface by Salmonella enterica serovar Weltevreden in both high and low nutrient medium.

Bhowmick PP, Devegowda D, Ruwandeepika HA, Fuchs TM, Srikumar S, Karunasagar I, Karunasagar I.

Microb Pathog. 2011 Feb;50(2):114-22. doi: 10.1016/j.micpath.2010.12.002. Epub 2010 Dec 10.


Potentiation of epithelial innate host responses by intercellular communication.

Dolowschiak T, Chassin C, Ben Mkaddem S, Fuchs TM, Weiss S, Vandewalle A, Hornef MW.

PLoS Pathog. 2010 Nov 18;6(11):e1001194. doi: 10.1371/journal.ppat.1001194.


Ethanolamine utilization contributes to proliferation of Salmonella enterica serovar Typhimurium in food and in nematodes.

Srikumar S, Fuchs TM.

Appl Environ Microbiol. 2011 Jan;77(1):281-90. doi: 10.1128/AEM.01403-10. Epub 2010 Oct 29.


Deciphering the intracellular metabolism of Listeria monocytogenes by mutant screening and modelling.

Schauer K, Geginat G, Liang C, Goebel W, Dandekar T, Fuchs TM.

BMC Genomics. 2010 Oct 18;11:573. doi: 10.1186/1471-2164-11-573.


Yersinia enterocolitica infection and tcaA-dependent killing of Caenorhabditis elegans.

Spanier B, Starke M, Higel F, Scherer S, Fuchs TM.

Appl Environ Microbiol. 2010 Sep;76(18):6277-85. doi: 10.1128/AEM.01274-10. Epub 2010 Jul 16.


Analysis of Yersinia enterocolitica invasin expression in vitro and in vivo using a novel luxCDABE reporter system.

Trcek J, Fuchs TM, Trülzsch K.

Microbiology. 2010 Sep;156(Pt 9):2734-45. doi: 10.1099/mic.0.038240-0. Epub 2010 Jun 17.


Pyruvate carboxylase plays a crucial role in carbon metabolism of extra- and intracellularly replicating Listeria monocytogenes.

Schär J, Stoll R, Schauer K, Loeffler DI, Eylert E, Joseph B, Eisenreich W, Fuchs TM, Goebel W.

J Bacteriol. 2010 Apr;192(7):1774-84. doi: 10.1128/JB.01132-09. Epub 2010 Jan 22.


myo-Inositol transport by Salmonella enterica serovar Typhimurium.

Kröger C, Stolz J, Fuchs TM.

Microbiology. 2010 Jan;156(Pt 1):128-38. doi: 10.1099/mic.0.032250-0. Epub 2009 Oct 15.


Both thiamine uptake and biosynthesis of thiamine precursors are required for intracellular replication of Listeria monocytogenes.

Schauer K, Stolz J, Scherer S, Fuchs TM.

J Bacteriol. 2009 Apr;191(7):2218-27. doi: 10.1128/JB.01636-08. Epub 2009 Jan 30.


Insecticidal genes of Yersinia spp.: taxonomical distribution, contribution to toxicity towards Manduca sexta and Galleria mellonella, and evolution.

Fuchs TM, Bresolin G, Marcinowski L, Schachtner J, Scherer S.

BMC Microbiol. 2008 Dec 8;8:214. doi: 10.1186/1471-2180-8-214.


Characterization of the myo-inositol utilization island of Salmonella enterica serovar Typhimurium.

Kröger C, Fuchs TM.

J Bacteriol. 2009 Jan;191(2):545-54. doi: 10.1128/JB.01253-08. Epub 2008 Nov 14.


Presence of a functional flagellar cluster Flag-2 and low-temperature expression of flagellar genes in Yersinia enterocolitica W22703.

Bresolin G, Trcek J, Scherer S, Fuchs TM.

Microbiology. 2008 Jan;154(Pt 1):196-206. doi: 10.1099/mic.0.2007/008458-0.


Pathogenomics of Listeria spp.

Hain T, Chatterjee SS, Ghai R, Kuenne CT, Billion A, Steinweg C, Domann E, Kärst U, Jänsch L, Wehland J, Eisenreich W, Bacher A, Joseph B, Schär J, Kreft J, Klumpp J, Loessner MJ, Dorscht J, Neuhaus K, Fuchs TM, Scherer S, Doumith M, Jacquet C, Martin P, Cossart P, Rusniock C, Glaser P, Buchrieser C, Goebel W, Chakraborty T.

Int J Med Microbiol. 2007 Nov;297(7-8):541-57. Epub 2007 May 7. Review.


Transcriptional analysis of long-term adaptation of Yersinia enterocolitica to low-temperature growth.

Bresolin G, Neuhaus K, Scherer S, Fuchs TM.

J Bacteriol. 2006 Apr;188(8):2945-58.


Low temperature-induced insecticidal activity of Yersinia enterocolitica.

Bresolin G, Morgan JA, Ilgen D, Scherer S, Fuchs TM.

Mol Microbiol. 2006 Jan;59(2):503-12.


Identification of Listeria monocytogenes genes contributing to intracellular replication by expression profiling and mutant screening.

Joseph B, Przybilla K, Stühler C, Schauer K, Slaghuis J, Fuchs TM, Goebel W.

J Bacteriol. 2006 Jan;188(2):556-68.


Insertion-duplication mutagenesis of Salmonella enterica and related species using a novel thermosensitive vector.

Fuchs TM, Klumpp J, Przybilla K.

Plasmid. 2006 Jan;55(1):39-49. Epub 2005 Aug 24.


Phg, a novel member of the autotransporter family present in Bordetella species.

Middendorf B, Stubs D, Guiso N, Deppisch H, Gross R, Fuchs TM.

Microbiol Res. 2005;160(3):329-36.


Identification and regulation of cold-inducible factors of Bordetella bronchiseptica.

Stübs D, Fuchs TM, Schneider B, Bosserhoff A, Gross R.

Microbiology. 2005 Jun;151(Pt 6):1895-909.


Large-scale identification of essential Salmonella genes by trapping lethal insertions.

Knuth K, Niesalla H, Hueck CJ, Fuchs TM.

Mol Microbiol. 2004 Mar;51(6):1729-44.


Regulatory factors of Bordetella pertussis affecting virulence gene expression.

König J, Bock A, Perraud AL, Fuchs TM, Beier D, Gross R.

J Mol Microbiol Biotechnol. 2002 May;4(3):197-203. Review.


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