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Items: 20

1.

Order, please! Uncertainty in the ordinal-level classification of Chlorophyceae.

Fučíková K, Lewis PO, Neupane S, Karol KG, Lewis LA.

PeerJ. 2019 May 15;7:e6899. doi: 10.7717/peerj.6899. eCollection 2019.

2.

Assessing Combinability of Phylogenomic Data using Bayes Factors.

Neupane S, Fucíková K, Lewis LA, Kuo L, Chen MH, Lewis PO.

Syst Biol. 2019 Feb 6. doi: 10.1093/sysbio/syz007. [Epub ahead of print]

PMID:
30726954
3.

Genome Sequence of Bacillus Phage Saddex.

Greguske E, Nadeau A, Fitzmeyer E, Fucikova K.

Microbiol Resour Announc. 2018 Sep 20;7(11). pii: e01044-18. doi: 10.1128/MRA.01044-18. eCollection 2018 Sep.

4.
5.

Novel green algal isolates from the Egyptian hyper-arid desert oases: a polyphasic approach with a description of Pharao desertorum gen. et sp. nov. (Chlorophyceae, Chlorophyta).

Saber AA, Fučíková K, McManus HA, Guella G, Cantonati M.

J Phycol. 2018 Jun;54(3):342-357. doi: 10.1111/jpy.12645. Epub 2018 May 8.

PMID:
29603234
6.

Molecular and morphological delimitation and generic classification of the family Oocystaceae (Trebouxiophyceae, Chlorophyta).

Štenclová L, Fučíková K, Kaštovský J, Pažoutová M.

J Phycol. 2017 Dec;53(6):1263-1282. doi: 10.1111/jpy.12581. Epub 2017 Sep 14.

PMID:
28833138
7.

Hiding in plain sight: Koshicola spirodelophila gen. et sp. nov. (Chaetopeltidales, Chlorophyceae), a novel green alga associated with the aquatic angiosperm Spirodela polyrhiza.

Watanabe S, Fučíková K, Lewis LA, Lewis PO.

Am J Bot. 2016 May;103(5):865-75. doi: 10.3732/ajb.1500481. Epub 2016 Apr 27.

8.

Estimating Bayesian Phylogenetic Information Content.

Lewis PO, Chen MH, Kuo L, Lewis LA, Fučíková K, Neupane S, Wang YB, Shi D.

Syst Biol. 2016 Nov;65(6):1009-1023. Epub 2016 May 6.

9.

Comparative analyses of chloroplast genome data representing nine green algae in Sphaeropleales (Chlorophyceae, Chlorophyta).

Fučíková K, Lewis LA, Lewis PO.

Data Brief. 2016 Mar 9;7:558-70. doi: 10.1016/j.dib.2016.03.014. eCollection 2016 Jun.

10.

Meiotic genes and sexual reproduction in the green algal class Trebouxiophyceae (Chlorophyta).

Fučíková K, Pažoutová M, Rindi F.

J Phycol. 2015 Jun;51(3):419-30. doi: 10.1111/jpy.12293. Epub 2015 Apr 6.

PMID:
26986659
11.

Chloroplast phylogenomic data from the green algal order Sphaeropleales (Chlorophyceae, Chlorophyta) reveal complex patterns of sequence evolution.

Fučíková K, Lewis PO, Lewis LA.

Mol Phylogenet Evol. 2016 May;98:176-83. doi: 10.1016/j.ympev.2016.01.022. Epub 2016 Feb 20.

PMID:
26903036
12.

A new record of the rare alga Pachycladella P. C. Silva (Chlorophyceae) in New England.

Fučíková K.

PhytoKeys. 2015 Sep 15;(56):19-27. doi: 10.3897/phytokeys.56.6268. eCollection 2015.

13.
14.

Uncovering Cryptic Diversity in Two Amoebozoan Species Using Complete Mitochondrial Genome Sequences.

Fučíková K, Lahr DJ.

J Eukaryot Microbiol. 2016 Jan-Feb;63(1):112-22. doi: 10.1111/jeu.12253. Epub 2015 Aug 28.

PMID:
26211788
15.

Phylogenetic uncertainty revisited: Implications for ecological analyses.

Rangel TF, Colwell RK, Graves GR, Fučíková K, Rahbek C, Diniz-Filho JA.

Evolution. 2015 May;69(5):1301-12. doi: 10.1111/evo.12644. Epub 2015 Apr 29.

PMID:
25800868
16.

Gene arrangement convergence, diverse intron content, and genetic code modifications in mitochondrial genomes of sphaeropleales (chlorophyta).

Fučíková K, Lewis PO, González-Halphen D, Lewis LA.

Genome Biol Evol. 2014 Aug 8;6(8):2170-80. doi: 10.1093/gbe/evu172.

17.

Putting incertae sedis taxa in their place: a proposal for ten new families and three new genera in Sphaeropleales (Chlorophyceae, Chlorophyta).

Fučíková K, Lewis PO, Lewis LA.

J Phycol. 2014 Feb;50(1):14-25. doi: 10.1111/jpy.12118. Epub 2013 Oct 10.

PMID:
26988005
18.

Probing the Monophyly of the Sphaeropleales (Chlorophyceae) Using Data From Five Genes.

Tippery NP, Fučíková K, Lewis PO, Lewis LA.

J Phycol. 2012 Dec;48(6):1482-93. doi: 10.1111/jpy.12003. Epub 2012 Nov 26.

PMID:
27009998
19.

Lineage-specific fragmentation and nuclear relocation of the mitochondrial cox2 gene in chlorophycean green algae (Chlorophyta).

Rodríguez-Salinas E, Riveros-Rosas H, Li Z, Fucíková K, Brand JJ, Lewis LA, González-Halphen D.

Mol Phylogenet Evol. 2012 Jul;64(1):166-76.

PMID:
22724135
20.

Invasion of protein coding genes by green algal ribosomal group I introns.

McManus HA, Lewis LA, Fučíková K, Haugen P.

Mol Phylogenet Evol. 2012 Jan;62(1):109-16. doi: 10.1016/j.ympev.2011.09.027. Epub 2011 Oct 24.

PMID:
22056605

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