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Items: 1 to 50 of 97

1.

Genomic Analysis of Multidrug-Resistant Escherichia coli from Surface Water in Northeast Georgia, United States: Presence of an ST131 Epidemic Strain Containing blaCTX-M-15 on a Phage-Like Plasmid.

Cho S, Gupta SK, McMillan EA, Sharma P, Ramadan H, Jové T, Jackson CR, Frye JG.

Microb Drug Resist. 2019 Nov 14. doi: 10.1089/mdr.2019.0306. [Epub ahead of print]

PMID:
31725354
2.

Genomic comparison of diverse Salmonella serovars isolated from swine.

Gupta SK, Sharma P, McMillan EA, Jackson CR, Hiott LM, Woodley T, Humayoun SB, Barrett JB, Frye JG, McClelland M.

PLoS One. 2019 Nov 1;14(11):e0224518. doi: 10.1371/journal.pone.0224518. eCollection 2019.

3.

Genetic Characterization of Antimicrobial-Resistant Escherichia coli Isolated from a Mixed-Use Watershed in Northeast Georgia, USA.

Cho S, Nguyen HAT, McDonald JM, Woodley TA, Hiott LM, Barrett JB, Jackson CR, Frye JG.

Int J Environ Res Public Health. 2019 Oct 7;16(19). pii: E3761. doi: 10.3390/ijerph16193761.

4.

Genome Analysis of Multidrug-Resistant Escherichia coli Isolated from Poultry in Nigeria.

Sharma P, Gupta SK, Adenipekun EO, Barrett JB, Hiott LM, Woodley TA, Iwalokun BA, Oluwadun A, Ramadan HH, Frye JG, Jackson CR.

Foodborne Pathog Dis. 2019 Sep 11. doi: 10.1089/fpd.2019.2659. [Epub ahead of print]

PMID:
31509034
5.

A newly developed Escherichia coli isolate panel from a cross section of U.S. animal production systems reveals geographic and commodity-based differences in antibiotic resistance gene carriage.

Ducey TF, Durso LM, Ibekwe AM, Dungan RS, Jackson CR, Frye JG, Castleberry BL, Rashash DMC, Rothrock MJ, Boykin D, Whitehead TR, Ramos Z, McManus M, Cook KL.

J Hazard Mater. 2020 Jan 15;382:120991. doi: 10.1016/j.jhazmat.2019.120991. Epub 2019 Aug 13.

PMID:
31446353
6.

Plasmid Replicons and β-Lactamase-Encoding Genes of Multidrug-Resistant Escherichia coli Isolated from Humans and Food Animals in Lagos, Southwest Nigeria.

Adenipekun EO, Jackson CR, Ramadan H, Iwalokun BA, Frye JG, Barrett JB, Hiott LM, Woodley TA, House SL, McMillan EA, Sharma P, Oluwadun A.

Microb Drug Resist. 2019 Jul 17. doi: 10.1089/mdr.2018.0305. [Epub ahead of print]

PMID:
31314658
7.

Antimicrobial Resistance Genes, Cassettes, and Plasmids Present in Salmonella enterica Associated With United States Food Animals.

McMillan EA, Gupta SK, Williams LE, Jové T, Hiott LM, Woodley TA, Barrett JB, Jackson CR, Wasilenko JL, Simmons M, Tillman GE, McClelland M, Frye JG.

Front Microbiol. 2019 Apr 17;10:832. doi: 10.3389/fmicb.2019.00832. eCollection 2019.

8.

An assay for determining the susceptibility of Salmonella isolates to commercial and household biocides.

Humayoun SB, Hiott LM, Gupta SK, Barrett JB, Woodley TA, Johnston JJ, Jackson CR, Frye JG.

PLoS One. 2018 Dec 20;13(12):e0209072. doi: 10.1371/journal.pone.0209072. eCollection 2018.

9.

Draft genome sequence of a human-associated streptogramin-resistant Staphylococcus aureus.

Gupta SK, Sharma P, Barrett JB, Hiott LM, Woodley TA, Frye JG, Jackson CR.

J Glob Antimicrob Resist. 2019 Mar;16:72-73. doi: 10.1016/j.jgar.2018.11.021. Epub 2018 Dec 12.

PMID:
30553115
10.

Multidrug resistant Mannheimia haemolytica isolated from high-risk beef stocker cattle after antimicrobial metaphylaxis and treatment for bovine respiratory disease.

Woolums AR, Karisch BB, Frye JG, Epperson W, Smith DR, Blanton J Jr, Austin F, Kaplan R, Hiott L, Woodley T, Gupta SK, Jackson CR, McClelland M.

Vet Microbiol. 2018 Jul;221:143-152. doi: 10.1016/j.vetmic.2018.06.005. Epub 2018 Jun 8.

PMID:
29981701
11.

Draft genome sequences of two ciprofloxacin-resistant Salmonella enterica subsp. enterica serotype Kentucky ST198 isolated from retail chicken carcasses in Egypt.

Ramadan H, Gupta SK, Sharma P, Sallam KI, Hiott LM, Elsayed H, Barrett JB, Frye JG, Jackson CR.

J Glob Antimicrob Resist. 2018 Sep;14:101-103. doi: 10.1016/j.jgar.2018.06.012. Epub 2018 Jun 30.

PMID:
29966701
12.

Prevalence and characterization of Escherichia coli isolated from the Upper Oconee Watershed in Northeast Georgia.

Cho S, Hiott LM, Barrett JB, McMillan EA, House SL, Humayoun SB, Adams ES, Jackson CR, Frye JG.

PLoS One. 2018 May 8;13(5):e0197005. doi: 10.1371/journal.pone.0197005. eCollection 2018.

13.

Whole genome sequencing of multidrug-resistant Salmonella enterica serovar Typhimurium isolated from humans and poultry in Burkina Faso.

Kagambèga A, Lienemann T, Frye JG, Barro N, Haukka K.

Trop Med Health. 2018 Feb 12;46:4. doi: 10.1186/s41182-018-0086-9. eCollection 2018.

14.

Draft Genome Sequences of Eight Streptogramin-Resistant Enterococcus Species Isolated from Animal and Environmental Sources in the United States.

Sharma P, Gupta SK, Barrett JB, Hiott LM, House SL, Woodley TA, Frye JG, Jackson CR.

Genome Announc. 2017 Nov 16;5(46). pii: e01287-17. doi: 10.1128/genomeA.01287-17.

15.

Gene Expression Response of Salmonella enterica Serotype Enteritidis Phage Type 8 to Subinhibitory Concentrations of the Plant-Derived Compounds Trans-Cinnamaldehyde and Eugenol.

Kollanoor Johny A, Frye JG, Donoghue A, Donoghue DJ, Porwollik S, McClelland M, Venkitanarayanan K.

Front Microbiol. 2017 Sep 26;8:1828. doi: 10.3389/fmicb.2017.01828. eCollection 2017.

16.

Draft Genome Sequence Analysis of Multidrug-Resistant Escherichia coli Strains Isolated in 2013 from Humans and Chickens in Nigeria.

Sharma P, Gupta SK, Adenipekun EO, Barrett JB, Hiott LM, Woodley TA, Iwalokun BA, Oyedeji KS, Oluwadun A, Ramadan H, Frye JG, Jackson CR.

Genome Announc. 2017 Oct 5;5(40). pii: e01073-17. doi: 10.1128/genomeA.01073-17.

17.

Novel DNA Binding and Regulatory Activities for σ54 (RpoN) in Salmonella enterica Serovar Typhimurium 14028s.

Bono AC, Hartman CE, Solaimanpour S, Tong H, Porwollik S, McClelland M, Frye JG, Mrázek J, Karls AC.

J Bacteriol. 2017 May 25;199(12). pii: e00816-16. doi: 10.1128/JB.00816-16. Print 2017 Jun 15.

18.

Draft Genome Sequence of Salmonella enterica subsp. diarizonae Serovar 61:k:1,5,(7) Strain CRJJGF_00165 (Phylum Gammaproteobacteria).

Gupta SK, McMillan EA, Jackson CR, Desai PT, Porwollik S, McClelland M, Hiott LM, Humayoun SB, Barrett JB, Frye JG.

Genome Announc. 2016 Nov 23;4(6). pii: e01322-16. doi: 10.1128/genomeA.01322-16.

19.

CARD 2017: expansion and model-centric curation of the comprehensive antibiotic resistance database.

Jia B, Raphenya AR, Alcock B, Waglechner N, Guo P, Tsang KK, Lago BA, Dave BM, Pereira S, Sharma AN, Doshi S, Courtot M, Lo R, Williams LE, Frye JG, Elsayegh T, Sardar D, Westman EL, Pawlowski AC, Johnson TA, Brinkman FS, Wright GD, McArthur AG.

Nucleic Acids Res. 2017 Jan 4;45(D1):D566-D573. doi: 10.1093/nar/gkw1004. Epub 2016 Oct 26.

20.

Prevalence and multidrug resistance of Escherichia coli from community-acquired infections in Lagos, Nigeria.

Adenipekun EO, Jackson CR, Ramadan H, Iwalokun BA, Oyedeji KS, Frye JG, Barrett JB, Hiott LM, Woodley TA, Oluwadun A.

J Infect Dev Ctries. 2016 Sep 30;10(9):920-931. doi: 10.3855/jidc.7997.

21.

Draft Genome Sequence of Salmonella enterica subsp. enterica Serovar Orion Strain CRJJGF_00093 (Phylum Gammaproteobacteria).

Gupta SK, McMillan EA, Jackson CR, Desai PT, Porwollik S, McClelland M, Hiott LM, Humayoun SB, Frye JG.

Genome Announc. 2016 Sep 29;4(5). pii: e01063-16. doi: 10.1128/genomeA.01063-16.

22.

Draft Genome Sequence of Salmonella enterica subsp. enterica Serovar Bardo Strain CRJJGF_00099 (Phylum Gammaproteobacteria).

Gupta SK, McMillan EA, Jackson CR, Desai PT, Porwollik S, McClelland M, Hiott LM, Humayoun SB, Frye JG.

Genome Announc. 2016 Sep 15;4(5). pii: e00964-16. doi: 10.1128/genomeA.00964-16.

23.

Draft Genome Sequence of Salmonella enterica subsp. enterica Serovar Blockley Strain CRJJGF_00147 (Phylum Gammaproteobacteria).

Gupta SK, McMillan EA, Jackson CR, Desai PT, Porwollik S, McClelland M, Hiott LM, Humayoun SB, Frye JG.

Genome Announc. 2016 Sep 8;4(5). pii: e00954-16. doi: 10.1128/genomeA.00954-16.

24.

Carcass orientation and drip time affect potential surface water carryover for broiler carcasses subjected to a post-chill water dip or spray1.

Bourassa DV, Wilson KM, Bartenfeld LN, Harris CE, Howard AK, Ingram KD, Hinton A Jr, Adams ES, Berrang ME, Feldner PW, Gamble GR, Frye JG, Jackson CR, Johnston JJ, Buhr RJ.

Poult Sci. 2017 Jan 1;96(1):241-245. Epub 2016 Sep 2.

PMID:
27591281
25.

Draft Genome Sequence of Salmonella enterica subsp. enterica Serovar Putten Strain CRJJGF_00159 (Phylum Gammaproteobacteria).

Gupta SK, McMillan EA, Jackson CR, Desai PT, Porwollik S, McCleland M, Hiott LM, Humayoun SB, Frye JG.

Genome Announc. 2016 Sep 1;4(5). pii: e00895-16. doi: 10.1128/genomeA.00895-16.

26.

Draft Genome Sequence of Salmonella enterica subsp. enterica Serovar Widemarsh Strain CRJJGF_00058 (Phylum Gammaproteobacteria).

Gupta SK, McMillan EA, Jackson CR, Desai PT, Porwollik S, McClelland M, Hiott LM, Humayoun SB, Frye JG.

Genome Announc. 2016 Jul 14;4(4). pii: e00604-16. doi: 10.1128/genomeA.00604-16.

27.

Draft Genome Sequence of Salmonella enterica subsp. enterica Serovar Lille Strain CRJJGF_000101 (Phylum Gammaproteobacteria).

Gupta SK, McMillan EA, Jackson CR, Desai PT, Porwollik S, McClelland M, Hiott LM, Humayoun SB, Frye JG.

Genome Announc. 2016 Jul 14;4(4). pii: e00603-16. doi: 10.1128/genomeA.00603-16.

28.

Draft Genome Sequence of Salmonella enterica subsp. enterica Serovar Kiambu Strain CRJJGF_00061 (Phylum Gammaproteobacteria).

Gupta SK, McMillan EA, Jackson CR, Desai PT, Porwollik S, McClelland M, Hiott LM, Humayoun SB, Frye JG.

Genome Announc. 2016 Jul 7;4(4). pii: e00588-16. doi: 10.1128/genomeA.00588-16.

29.

In Vivo Transmission of an IncA/C Plasmid in Escherichia coli Depends on Tetracycline Concentration, and Acquisition of the Plasmid Results in a Variable Cost of Fitness.

Johnson TJ, Singer RS, Isaacson RE, Danzeisen JL, Lang K, Kobluk K, Rivet B, Borewicz K, Frye JG, Englen M, Anderson J, Davies PR.

Appl Environ Microbiol. 2015 May 15;81(10):3561-70. doi: 10.1128/AEM.04193-14. Epub 2015 Mar 13.

30.

Prevalence and Antimicrobial Resistance in Escherichia coli from Food Animals in Lagos, Nigeria.

Adenipekun EO, Jackson CR, Oluwadun A, Iwalokun BA, Frye JG, Barrett JB, Hiott LM, Woodley TA.

Microb Drug Resist. 2015 Jun;21(3):358-65. doi: 10.1089/mdr.2014.0222. Epub 2015 Feb 6.

PMID:
25658418
31.

Diversity of Plasmids and Antimicrobial Resistance Genes in Multidrug-Resistant Escherichia coli Isolated from Healthy Companion Animals.

Jackson CR, Davis JA, Frye JG, Barrett JB, Hiott LM.

Zoonoses Public Health. 2015 Sep;62(6):479-88. doi: 10.1111/zph.12178. Epub 2015 Feb 4.

PMID:
25653018
32.

Antimicrobial resistance, virulence determinants and genetic profiles of clinical and nonclinical Enterococcus cecorum from poultry.

Jackson CR, Kariyawasam S, Borst LB, Frye JG, Barrett JB, Hiott LM, Woodley TA.

Lett Appl Microbiol. 2015 Feb;60(2):111-9. doi: 10.1111/lam.12374. Epub 2015 Jan 7.

33.

Genomic epidemiology of Salmonella enterica serotype Enteritidis based on population structure of prevalent lineages.

Deng X, Desai PT, den Bakker HC, Mikoleit M, Tolar B, Trees E, Hendriksen RS, Frye JG, Porwollik S, Weimer BC, Wiedmann M, Weinstock GM, Fields PI, McClelland M.

Emerg Infect Dis. 2014 Sep;20(9):1481-9. doi: 10.3201/eid2009.131095.

34.

Relative survival of four serotypes of Salmonella enterica in low-water activity whey protein powder held at 36 and 70°C at various water activity levels.

Santillana Farakos S, Hicks JW, Frye JG, Frank JF.

J Food Prot. 2014 Jul;77(7):1198-200. doi: 10.4315/0362-028X.JFP-13-327.

PMID:
24988029
35.

Whole-Genome Sequencing of Salmonella enterica subsp. enterica Serovar Cubana Strains Isolated from Agricultural Sources.

Benahmed FH, Gopinath GR, Wang H, Jean-Gilles Beaubrun J, Grim C, Cheng CM, McClelland M, Ayers S, Abbott J, Desai P, Frye JG, Weinstock G, Hammack TS, Hanes DE, Rasmussen MA, Davidson MK.

Genome Announc. 2014 Jan 23;2(1). pii: e01184-13. doi: 10.1128/genomeA.01184-13.

36.

Use of a promiscuous, constitutively-active bacterial enhancer-binding protein to define the σ⁵⁴ (RpoN) regulon of Salmonella Typhimurium LT2.

Samuels DJ, Frye JG, Porwollik S, McClelland M, Mrázek J, Hoover TR, Karls AC.

BMC Genomics. 2013 Sep 5;14:602. doi: 10.1186/1471-2164-14-602.

37.
38.

Pathogenicity of dodecyltrimethylammonium chloride-resistant Salmonella enterica.

Kautz MJ, Dvorzhinskiy A, Frye JG, Stevenson N, Herson DS.

Appl Environ Microbiol. 2013 Apr;79(7):2371-6. doi: 10.1128/AEM.03228-12. Epub 2013 Feb 1.

39.

Antimicrobial resistance genes in multidrug-resistant Salmonella enterica isolated from animals, retail meats, and humans in the United States and Canada.

Glenn LM, Lindsey RL, Folster JP, Pecic G, Boerlin P, Gilmour MW, Harbottle H, Zhao S, McDermott PF, Fedorka-Cray PJ, Frye JG.

Microb Drug Resist. 2013 Jun;19(3):175-84. doi: 10.1089/mdr.2012.0177. Epub 2013 Jan 25.

40.

The intestinal fatty acid propionate inhibits Salmonella invasion through the post-translational control of HilD.

Hung CC, Garner CD, Slauch JM, Dwyer ZW, Lawhon SD, Frye JG, McClelland M, Ahmer BM, Altier C.

Mol Microbiol. 2013 Mar;87(5):1045-60. doi: 10.1111/mmi.12149. Epub 2013 Jan 28.

41.

Characteristics of plasmids in multi-drug-resistant Enterobacteriaceae isolated during prospective surveillance of a newly opened hospital in Iraq.

Huang XZ, Frye JG, Chahine MA, Glenn LM, Ake JA, Su W, Nikolich MP, Lesho EP.

PLoS One. 2012;7(7):e40360. doi: 10.1371/journal.pone.0040360. Epub 2012 Jul 11.

42.

Analysis of Campylobacter jejuni whole-genome DNA microarrays: significance of prophage and hypervariable regions for discriminating isolates.

Pittenger LG, Frye JG, McNerney V, Reeves J, Haro J, Fedorka-Cray PJ, Harrison MA, Englen MD.

Foodborne Pathog Dis. 2012 May;9(5):473-9. doi: 10.1089/fpd.2011.1048. Epub 2012 Apr 16.

PMID:
22506962
43.

Analysis of antimicrobial resistance genes detected in multiple-drug-resistant Escherichia coli isolates from broiler chicken carcasses.

Glenn LM, Englen MD, Lindsey RL, Frank JF, Turpin JE, Berrang ME, Meinersmann RJ, Fedorka-Cray PJ, Frye JG.

Microb Drug Resist. 2012 Aug;18(4):453-63. doi: 10.1089/mdr.2011.0224. Epub 2012 Mar 2.

PMID:
22385320
44.

Gene expression analysis of Salmonella enterica Enteritidis Nal(R) and Salmonella enterica Kentucky 3795 exposed to HCl and acetic acid in rich medium.

Joerger RD, Sartori C, Frye JG, Turpin JB, Schmidt C, McClelland M, Porwollik S.

Foodborne Pathog Dis. 2012 Apr;9(4):331-7. doi: 10.1089/fpd.2011.0984. Epub 2012 Feb 22.

45.

Molecular analysis of imipenem-resistant Acinetobacter baumannii isolated from US service members wounded in Iraq, 2003-2008.

Huang XZ, Chahine MA, Frye JG, Cash DM, Lesho EP, Craft DW, Lindler LE, Nikolich MP.

Epidemiol Infect. 2012 Dec;140(12):2302-7. doi: 10.1017/S0950268811002871. Epub 2012 Jan 25.

46.

Hydrogen-stimulated carbon acquisition and conservation in Salmonella enterica serovar Typhimurium.

Lamichhane-Khadka R, Frye JG, Porwollik S, McClelland M, Maier RJ.

J Bacteriol. 2011 Oct;193(20):5824-32. doi: 10.1128/JB.05456-11. Epub 2011 Aug 19.

47.

Microarray-based analysis of IncA/C plasmid-associated genes from multidrug-resistant Salmonella enterica.

Lindsey RL, Frye JG, Fedorka-Cray PJ, Meinersmann RJ.

Appl Environ Microbiol. 2011 Oct;77(19):6991-9. doi: 10.1128/AEM.00567-11. Epub 2011 Aug 12.

48.

Analysis of antimicrobial resistance genes detected in multidrug-resistant Salmonella enterica serovar Typhimurium isolated from food animals.

Glenn LM, Lindsey RL, Frank JF, Meinersmann RJ, Englen MD, Fedorka-Cray PJ, Frye JG.

Microb Drug Resist. 2011 Sep;17(3):407-18. doi: 10.1089/mdr.2010.0189. Epub 2011 Apr 3.

PMID:
21457076
49.

Related antimicrobial resistance genes detected in different bacterial species co-isolated from swine fecal samples.

Frye JG, Lindsey RL, Meinersmann RJ, Berrang ME, Jackson CR, Englen MD, Turpin JB, Fedorka-Cray PJ.

Foodborne Pathog Dis. 2011 Jun;8(6):663-79. doi: 10.1089/fpd.2010.0695. Epub 2011 Mar 8.

PMID:
21385089
50.

Characterization of multidrug-resistant Escherichia coli by antimicrobial resistance profiles, plasmid replicon typing, and pulsed-field gel electrophoresis.

Lindsey RL, Frye JG, Thitaram SN, Meinersmann RJ, Fedorka-Cray PJ, Englen MD.

Microb Drug Resist. 2011 Jun;17(2):157-63. doi: 10.1089/mdr.2010.0148. Epub 2011 Feb 19.

PMID:
21332363

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