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Items: 1 to 50 of 64

1.

Alien domains shaped the modular structure of plant NLR proteins.

Andolfo G, Donato AD, Chiaiese P, Natale A, Pollio A, Jones JDG, Frusciante L, Ercolano MR.

Genome Biol Evol. 2019 Nov 15. pii: evz248. doi: 10.1093/gbe/evz248. [Epub ahead of print]

PMID:
31730154
2.

Deciphering the biological processes underlying tomato biomass production and composition.

D'Esposito D, Cappetta E, Andolfo G, Ferriello F, Borgonuovo C, Caruso G, De Natale A, Frusciante L, Ercolano MR.

Plant Physiol Biochem. 2019 Oct;143:50-60. doi: 10.1016/j.plaphy.2019.08.010. Epub 2019 Aug 13.

PMID:
31479882
3.

Multilevel comparative bioinformatics to investigate evolutionary relationships and specificities in gene annotations: an example for tomato and grapevine.

Ambrosino L, Ruggieri V, Bostan H, Miralto M, Vitulo N, Zouine M, Barone A, Bouzayen M, Frusciante L, Pezzotti M, Valle G, Chiusano ML.

BMC Bioinformatics. 2018 Nov 30;19(Suppl 15):435. doi: 10.1186/s12859-018-2420-y.

4.

Genome Sequencing of Ancient Plant Remains: Findings, Uses and Potential Applications for the Study and Improvement of Modern Crops.

Di Donato A, Filippone E, Ercolano MR, Frusciante L.

Front Plant Sci. 2018 Apr 17;9:441. doi: 10.3389/fpls.2018.00441. eCollection 2018. Review.

5.

Dating the beginning of the Roman viticultural model in the Western Mediterranean: The case study of Chianti (Central Italy).

Aversano R, Basile B, Buonincontri MP, Carucci F, Carputo D, Frusciante L, Di Pasquale G.

PLoS One. 2017 Nov 15;12(11):e0186298. doi: 10.1371/journal.pone.0186298. eCollection 2017.

6.

Metabolic and RNA profiling elucidates proanthocyanidins accumulation in Aglianico grape.

Rinaldi A, Villano C, Lanzillo C, Tamburrino A Jr, Jourdes M, Teissedre PL, Moio L, Frusciante L, Carputo D, Aversano R.

Food Chem. 2017 Oct 15;233:52-59. doi: 10.1016/j.foodchem.2017.04.093. Epub 2017 Apr 18.

PMID:
28530607
7.

Unraveling the complexity of transcriptomic, metabolomic and quality environmental response of tomato fruit.

D'Esposito D, Ferriello F, Molin AD, Diretto G, Sacco A, Minio A, Barone A, Di Monaco R, Cavella S, Tardella L, Giuliano G, Delledonne M, Frusciante L, Ercolano MR.

BMC Plant Biol. 2017 Mar 28;17(1):66. doi: 10.1186/s12870-017-1008-4.

8.

Genome-Editing Technologies for Enhancing Plant Disease Resistance.

Andolfo G, Iovieno P, Frusciante L, Ercolano MR.

Front Plant Sci. 2016 Dec 1;7:1813. eCollection 2016. Review.

9.

Metabolic and Molecular Changes of the Phenylpropanoid Pathway in Tomato (Solanum lycopersicum) Lines Carrying Different Solanum pennellii Wild Chromosomal Regions.

Rigano MM, Raiola A, Docimo T, Ruggieri V, Calafiore R, Vitaglione P, Ferracane R, Frusciante L, Barone A.

Front Plant Sci. 2016 Oct 4;7:1484. eCollection 2016.

10.

An ascorbic acid-enriched tomato genotype to fight UVA-induced oxidative stress in normal human keratinocytes.

Petruk G, Raiola A, Del Giudice R, Barone A, Frusciante L, Rigano MM, Monti DM.

J Photochem Photobiol B. 2016 Oct;163:284-9. doi: 10.1016/j.jphotobiol.2016.08.047. Epub 2016 Aug 31.

PMID:
27599115
11.

Exploiting Genomics Resources to Identify Candidate Genes Underlying Antioxidants Content in Tomato Fruit.

Calafiore R, Ruggieri V, Raiola A, Rigano MM, Sacco A, Hassan MI, Frusciante L, Barone A.

Front Plant Sci. 2016 Apr 8;7:397. doi: 10.3389/fpls.2016.00397. eCollection 2016.

12.

Exploring tomato Solanum pennellii introgression lines for residual biomass and enzymatic digestibility traits.

Caruso G, Gomez LD, Ferriello F, Andolfi A, Borgonuovo C, Evidente A, Simister R, McQueen-Mason SJ, Carputo D, Frusciante L, Ercolano MR.

BMC Genet. 2016 Apr 5;17:56. doi: 10.1186/s12863-016-0362-9.

13.

Integrated bioinformatics to decipher the ascorbic acid metabolic network in tomato.

Ruggieri V, Bostan H, Barone A, Frusciante L, Chiusano ML.

Plant Mol Biol. 2016 Jul;91(4-5):397-412. doi: 10.1007/s11103-016-0469-4. Epub 2016 Mar 23.

PMID:
27007138
14.

Transcriptome and metabolome of synthetic Solanum autotetraploids reveal key genomic stress events following polyploidization.

Fasano C, Diretto G, Aversano R, D'Agostino N, Di Matteo A, Frusciante L, Giuliano G, Carputo D.

New Phytol. 2016 Jun;210(4):1382-94. doi: 10.1111/nph.13878. Epub 2016 Feb 24.

15.

Structure, evolution and functional inference on the Mildew Locus O (MLO) gene family in three cultivated Cucurbitaceae spp.

Iovieno P, Andolfo G, Schiavulli A, Catalano D, Ricciardi L, Frusciante L, Ercolano MR, Pavan S.

BMC Genomics. 2015 Dec 29;16:1112. doi: 10.1186/s12864-015-2325-3.

16.

Vitamin E Content and Composition in Tomato Fruits: Beneficial Roles and Bio-Fortification.

Raiola A, Tenore GC, Barone A, Frusciante L, Rigano MM.

Int J Mol Sci. 2015 Dec 8;16(12):29250-64. doi: 10.3390/ijms161226163. Review.

17.

The Solanum commersonii Genome Sequence Provides Insights into Adaptation to Stress Conditions and Genome Evolution of Wild Potato Relatives.

Aversano R, Contaldi F, Ercolano MR, Grosso V, Iorizzo M, Tatino F, Xumerle L, Dal Molin A, Avanzato C, Ferrarini A, Delledonne M, Sanseverino W, Cigliano RA, Capella-Gutierrez S, Gabaldón T, Frusciante L, Bradeen JM, Carputo D.

Plant Cell. 2015 Apr;27(4):954-68. doi: 10.1105/tpc.114.135954. Epub 2015 Apr 14.

18.

Genetic variability and evolutionary diversification of membrane ABC transporters in plants.

Andolfo G, Ruocco M, Di Donato A, Frusciante L, Lorito M, Scala F, Ercolano MR.

BMC Plant Biol. 2015 Feb 13;15:51. doi: 10.1186/s12870-014-0323-2.

19.

Quantitative trait loci pyramiding can improve the nutritional potential of tomato (Solanum lycopersicum) fruits.

Rigano MM, Raiola A, Tenore GC, Monti DM, Del Giudice R, Frusciante L, Barone A.

J Agric Food Chem. 2014 Nov 26;62(47):11519-27. doi: 10.1021/jf502573n. Epub 2014 Nov 17.

PMID:
25369113
20.

Use of SSR and retrotransposon-based markers to interpret the population structure of native grapevines from southern Italy.

Villano C, Carputo D, Frusciante L, Santoro X, Aversano R.

Mol Biotechnol. 2014 Nov;56(11):1011-20. doi: 10.1007/s12033-014-9780-y.

PMID:
24973024
21.

Tomato genome-wide transcriptional responses to Fusarium wilt and Tomato Mosaic Virus.

Andolfo G, Ferriello F, Tardella L, Ferrarini A, Sigillo L, Frusciante L, Ercolano MR.

PLoS One. 2014 May 7;9(5):e94963. doi: 10.1371/journal.pone.0094963. eCollection 2014.

22.

Enhancing the health-promoting effects of tomato fruit for biofortified food.

Raiola A, Rigano MM, Calafiore R, Frusciante L, Barone A.

Mediators Inflamm. 2014;2014:139873. doi: 10.1155/2014/139873. Epub 2014 Mar 12. Review.

23.

Patchwork sequencing of tomato San Marzano and Vesuviano varieties highlights genome-wide variations.

Ercolano MR, Sacco A, Ferriello F, D'Alessandro R, Tononi P, Traini A, Barone A, Zago E, Chiusano ML, Buson G, Delledonne M, Frusciante L.

BMC Genomics. 2014 Feb 18;15:138. doi: 10.1186/1471-2164-15-138.

24.

Characterization of the glutathione S-transferase gene family through ESTs and expression analyses within common and pigmented cultivars of Citrus sinensis (L.) Osbeck.

Licciardello C, D'Agostino N, Traini A, Recupero GR, Frusciante L, Chiusano ML.

BMC Plant Biol. 2014 Feb 3;14:39. doi: 10.1186/1471-2229-14-39.

25.

Biochemical features of native red wines and genetic diversity of the corresponding grape varieties from Campania region.

Muccillo L, Gambuti A, Frusciante L, Iorizzo M, Moio L, Raieta K, Rinaldi A, Colantuoni V, Aversano R.

Food Chem. 2014 Jan 15;143:506-13. doi: 10.1016/j.foodchem.2013.07.133. Epub 2013 Aug 8.

PMID:
24054274
26.

Genome Microscale Heterogeneity among Wild Potatoes Revealed by Diversity Arrays Technology Marker Sequences.

Traini A, Iorizzo M, Mann H, Bradeen JM, Carputo D, Frusciante L, Chiusano ML.

Int J Genomics. 2013;2013:257218. doi: 10.1155/2013/257218. Epub 2013 May 8.

27.

Identification of candidate genes for phenolics accumulation in tomato fruit.

Di Matteo A, Ruggieri V, Sacco A, Rigano MM, Carriero F, Bolger A, Fernie AR, Frusciante L, Barone A.

Plant Sci. 2013 May;205-206:87-96. doi: 10.1016/j.plantsci.2013.02.001. Epub 2013 Feb 13.

PMID:
23498866
28.

Production of pharmaceutical proteins in solanaceae food crops.

Rigano MM, De Guzman G, Walmsley AM, Frusciante L, Barone A.

Int J Mol Sci. 2013 Jan 29;14(2):2753-73. doi: 10.3390/ijms14022753.

29.

Overview of tomato (Solanum lycopersicum) candidate pathogen recognition genes reveals important Solanum R locus dynamics.

Andolfo G, Sanseverino W, Rombauts S, Van de Peer Y, Bradeen JM, Carputo D, Frusciante L, Ercolano MR.

New Phytol. 2013 Jan;197(1):223-37. doi: 10.1111/j.1469-8137.2012.04380.x. Epub 2012 Nov 19.

30.

PRGdb 2.0: towards a community-based database model for the analysis of R-genes in plants.

Sanseverino W, Hermoso A, D'Alessandro R, Vlasova A, Andolfo G, Frusciante L, Lowy E, Roma G, Ercolano MR.

Nucleic Acids Res. 2013 Jan;41(Database issue):D1167-71. doi: 10.1093/nar/gks1183. Epub 2012 Nov 17.

31.

A novel synthetic peptide from a tomato defensin exhibits antibacterial activities against Helicobacter pylori.

Rigano MM, Romanelli A, Fulgione A, Nocerino N, D'Agostino N, Avitabile C, Frusciante L, Barone A, Capuano F, Capparelli R.

J Pept Sci. 2012 Dec;18(12):755-62. doi: 10.1002/psc.2462. Epub 2012 Nov 4.

PMID:
23124812
32.

Comparative transcriptomic profiling of two tomato lines with different ascorbate content in the fruit.

Di Matteo A, Sacco A, De Stefano R, Frusciante L, Barone A.

Biochem Genet. 2012 Dec;50(11-12):908-21. doi: 10.1007/s10528-012-9531-3. Epub 2012 Aug 22.

33.

Polyphenol distribution in plant organs of tomato introgression lines.

Minutolo M, Amalfitano C, Evidente A, Frusciante L, Errico A.

Nat Prod Res. 2013;27(9):787-95. doi: 10.1080/14786419.2012.704371. Epub 2012 Jul 13.

PMID:
22788700
34.

Euchromatic and heterochromatic compositional properties emerging from the analysis of Solanum lycopersicum BAC sequences.

Di Filippo M, Traini A, D'Agostino N, Frusciante L, Chiusano ML.

Gene. 2012 May 10;499(1):176-81. doi: 10.1016/j.gene.2012.02.044. Epub 2012 Feb 26.

PMID:
22391094
35.

Genetic and genomic approaches for R-gene mediated disease resistance in tomato: retrospects and prospects.

Ercolano MR, Sanseverino W, Carli P, Ferriello F, Frusciante L.

Plant Cell Rep. 2012 Jun;31(6):973-85. doi: 10.1007/s00299-012-1234-z. Epub 2012 Feb 18. Review.

36.

Secondary metabolite profile in induced tetraploids of wild Solanum commersonii Dun.

Caruso I, Lepore L, De Tommasi N, Dal Piaz F, Frusciante L, Aversano R, Garramone R, Carputo D.

Chem Biodivers. 2011 Dec;8(12):2226-37. doi: 10.1002/cbdv.201100038.

PMID:
22162160
37.

Revealing impaired pathways in the an11 mutant by high-throughput characterization of Petunia axillaris and Petunia inflata transcriptomes.

Zenoni S, D'Agostino N, Tornielli GB, Quattrocchio F, Chiusano ML, Koes R, Zethof J, Guzzo F, Delledonne M, Frusciante L, Gerats T, Pezzotti M.

Plant J. 2011 Oct;68(1):11-27. doi: 10.1111/j.1365-313X.2011.04661.x. Epub 2011 Jul 14.

38.

Dissection of genetic and environmental factors involved in tomato organoleptic quality.

Carli P, Barone A, Fogliano V, Frusciante L, Ercolano MR.

BMC Plant Biol. 2011 Mar 31;11:58. doi: 10.1186/1471-2229-11-58.

39.

Glycoalkaloid profile in potato haploids derived from solanum tuberosum-S. bulbocastanum somatic hybrids.

Carputo D, Savarese S, Andolfi A, Aversano R, Cimmino A, Frusciante L, Evidente A.

Chem Biodivers. 2010 Aug;7(8):1885-92. doi: 10.1002/cbdv.200900391.

PMID:
20730954
40.

The ascorbic acid content of tomato fruits is associated with the expression of genes involved in pectin degradation.

Di Matteo A, Sacco A, Anacleria M, Pezzotti M, Delledonne M, Ferrarini A, Frusciante L, Barone A.

BMC Plant Biol. 2010 Aug 6;10:163. doi: 10.1186/1471-2229-10-163.

41.

SolEST database: a "one-stop shop" approach to the study of Solanaceae transcriptomes.

D'Agostino N, Traini A, Frusciante L, Chiusano ML.

BMC Plant Biol. 2009 Nov 30;9:142. doi: 10.1186/1471-2229-9-142.

42.

PRGdb: a bioinformatics platform for plant resistance gene analysis.

Sanseverino W, Roma G, De Simone M, Faino L, Melito S, Stupka E, Frusciante L, Ercolano MR.

Nucleic Acids Res. 2010 Jan;38(Database issue):D814-21. doi: 10.1093/nar/gkp978. Epub 2009 Nov 11.

43.

High-throughput genomics enhances tomato breeding efficiency.

Barone A, Di Matteo A, Carputo D, Frusciante L.

Curr Genomics. 2009 Mar;10(1):1-9. doi: 10.2174/138920209787581226.

44.

Use of network analysis to capture key traits affecting tomato organoleptic quality.

Carli P, Arima S, Fogliano V, Tardella L, Frusciante L, Ercolano MR.

J Exp Bot. 2009;60(12):3379-86. doi: 10.1093/jxb/erp177. Epub 2009 Jun 10.

45.

Glycoalkaloids as biomarkers for recognition of cultivated, wild, and somatic hybrids of potato.

Savarese S, Andolfi A, Cimmino A, Carputo D, Frusciante L, Evidente A.

Chem Biodivers. 2009 Apr;6(4):437-46. doi: 10.1002/cbdv.200800247.

PMID:
19353547
46.

The Tomato Sequencing Project, the first cornerstone of the International Solanaceae Project (SOL).

Mueller LA, Tanksley SD, Giovannoni JJ, van Eck J, Stack S, Choi D, Kim BD, Chen M, Cheng Z, Li C, Ling H, Xue Y, Seymour G, Bishop G, Bryan G, Sharma R, Khurana J, Tyagi A, Chattopadhyay D, Singh NK, Stiekema W, Lindhout P, Jesse T, Lankhorst RK, Bouzayen M, Shibata D, Tabata S, Granell A, Botella MA, Giuliano G, Frusciante L, Causse M, Zamir D.

Comp Funct Genomics. 2005;6(3):153-8. doi: 10.1002/cfg.468.

47.

ISOL@: an Italian SOLAnaceae genomics resource.

Chiusano ML, D'Agostino N, Traini A, Licciardello C, Raimondo E, Aversano M, Frusciante L, Monti L.

BMC Bioinformatics. 2008 Mar 26;9 Suppl 2:S7. doi: 10.1186/1471-2105-9-S2-S7.

48.

Structural and functional genomics of tomato.

Barone A, Chiusano ML, Ercolano MR, Giuliano G, Grandillo S, Frusciante L.

Int J Plant Genomics. 2008;2008:820274. doi: 10.1155/2008/820274.

49.

Nuclear and cytoplasmic genome composition of Solanum bulbocastanum (+) S. tuberosum somatic hybrids.

Iovene M, Savarese S, Cardi T, Frusciante L, Scotti N, Simon PW, Carputo D.

Genome. 2007 May;50(5):443-50.

PMID:
17612613
50.

Gene models from ESTs (GeneModelEST): an application on the Solanum lycopersicum genome.

D'Agostino N, Traini A, Frusciante L, Chiusano ML.

BMC Bioinformatics. 2007 Mar 8;8 Suppl 1:S9.

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