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Response of the human gut and saliva microbiome to urbanization in Cameroon.

Lokmer A, Aflalo S, Amougou N, Lafosse S, Froment A, Tabe FE, Poyet M, Groussin M, Said-Mohamed R, Ségurel L.

Sci Rep. 2020 Feb 18;10(1):2856. doi: 10.1038/s41598-020-59849-9.


Elevated Microparticle Tissue Factor Activity Differentiates Patients With Venous Thromboembolism in Anti-neutrophil Cytoplasmic Autoantibody Vasculitis.

Mendoza CE, Brant EJ, McDermott ML, Froment A, Hu Y, Hogan SL, Jennette JC, Falk RJ, Nachman PH, Derebail VK, Bunch DO.

Kidney Int Rep. 2019 Jul 13;4(11):1617-1629. doi: 10.1016/j.ekir.2019.07.006. eCollection 2019 Nov.


Correction to: African evolutionary history inferred from whole genome sequence data of 44 indigenous African populations.

Fan S, Kelly DE, Beltrame MH, Hansen MEB, Mallick S, Ranciaro A, Hirbo J, Thompson S, Beggs W, Nyambo T, Omar SA, Meskel DW, Belay G, Froment A, Patterson N, Reich D, Tishkoff SA.

Genome Biol. 2019 Oct 9;20(1):204. doi: 10.1186/s13059-019-1821-1.


Genomic Evidence for Local Adaptation of Hunter-Gatherers to the African Rainforest.

Lopez M, Choin J, Sikora M, Siddle K, Harmant C, Costa HA, Silvert M, Mouguiama-Daouda P, Hombert JM, Froment A, Le Bomin S, Perry GH, Barreiro LB, Bustamante CD, Verdu P, Patin E, Quintana-Murci L.

Curr Biol. 2019 Sep 9;29(17):2926-2935.e4. doi: 10.1016/j.cub.2019.07.013. Epub 2019 Aug 8.


The mandible of Saint-Louis (1270 AD): Retrospective diagnosis and circumstances of death.

Charlier P, Augias A, Benmoussa N, Rainsard P, Froesch P, Richardin P, Froment A, Bianucci R, Appenzeller O, Perciaccante A, Lippi D, Prades L.

J Stomatol Oral Maxillofac Surg. 2019 Jun 8. pii: S2468-7855(19)30156-9. doi: 10.1016/j.jormas.2019.05.007. [Epub ahead of print]


Nomadic pastoralists and sedentary farmers of the Sahel/Savannah Belt of Africa in the light of geometric morphometrics based on facial portraits.

Kleisner K, Pokorný Š, Čížková M, Froment A, Černý V.

Am J Phys Anthropol. 2019 Aug;169(4):632-645. doi: 10.1002/ajpa.23845. Epub 2019 Apr 29.


African evolutionary history inferred from whole genome sequence data of 44 indigenous African populations.

Fan S, Kelly DE, Beltrame MH, Hansen MEB, Mallick S, Ranciaro A, Hirbo J, Thompson S, Beggs W, Nyambo T, Omar SA, Meskel DW, Belay G, Froment A, Patterson N, Reich D, Tishkoff SA.

Genome Biol. 2019 Apr 26;20(1):82. doi: 10.1186/s13059-019-1679-2. Erratum in: Genome Biol. 2019 Oct 9;20(1):204.


Genomic evidence for shared common ancestry of East African hunting-gathering populations and insights into local adaptation.

Scheinfeldt LB, Soi S, Lambert C, Ko WY, Coulibaly A, Ranciaro A, Thompson S, Hirbo J, Beggs W, Ibrahim M, Nyambo T, Omar S, Woldemeskel D, Belay G, Froment A, Kim J, Tishkoff SA.

Proc Natl Acad Sci U S A. 2019 Mar 5;116(10):4166-4175. doi: 10.1073/pnas.1817678116. Epub 2019 Feb 19.


Use of shotgun metagenomics for the identification of protozoa in the gut microbiota of healthy individuals from worldwide populations with various industrialization levels.

Lokmer A, Cian A, Froment A, Gantois N, Viscogliosi E, Chabé M, Ségurel L.

PLoS One. 2019 Feb 6;14(2):e0211139. doi: 10.1371/journal.pone.0211139. eCollection 2019.


A genome scan for genes underlying adult body size differences between Central African hunter-gatherers and farmers.

Pemberton TJ, Verdu P, Becker NS, Willer CJ, Hewlett BS, Le Bomin S, Froment A, Rosenberg NA, Heyer E.

Hum Genet. 2018 Jul;137(6-7):487-509. doi: 10.1007/s00439-018-1902-3. Epub 2018 Jul 14.


Earliest Animal Cranial Surgery: from Cow to Man in the Neolithic.

Ramirez Rozzi F, Froment A.

Sci Rep. 2018 Apr 19;8(1):5536. doi: 10.1038/s41598-018-23914-1.


The demographic history and mutational load of African hunter-gatherers and farmers.

Lopez M, Kousathanas A, Quach H, Harmant C, Mouguiama-Daouda P, Hombert JM, Froment A, Perry GH, Barreiro LB, Verdu P, Patin E, Quintana-Murci L.

Nat Ecol Evol. 2018 Apr;2(4):721-730. doi: 10.1038/s41559-018-0496-4. Epub 2018 Mar 12.


Trends in DNA Methylation with Age Replicate Across Diverse Human Populations.

Gopalan S, Carja O, Fagny M, Patin E, Myrick JW, McEwen LM, Mah SM, Kobor MS, Froment A, Feldman MW, Quintana-Murci L, Henn BM.

Genetics. 2017 Jul;206(3):1659-1674. doi: 10.1534/genetics.116.195594. Epub 2017 May 22.


[Human pigmentation and evolution].

Revuz J, Froment A.

Ann Dermatol Venereol. 2017 Jun - Jul;144(6-7):474-480. doi: 10.1016/j.annder.2017.03.006. Epub 2017 May 18. French. No abstract available.


Dispersals and genetic adaptation of Bantu-speaking populations in Africa and North America.

Patin E, Lopez M, Grollemund R, Verdu P, Harmant C, Quach H, Laval G, Perry GH, Barreiro LB, Froment A, Heyer E, Massougbodji A, Fortes-Lima C, Migot-Nabias F, Bellis G, Dugoujon JM, Pereira JB, Fernandes V, Pereira L, Van der Veen L, Mouguiama-Daouda P, Bustamante CD, Hombert JM, Quintana-Murci L.

Science. 2017 May 5;356(6337):543-546. doi: 10.1126/science.aal1988.


A Locus at 5q33.3 Confers Resistance to Tuberculosis in Highly Susceptible Individuals.

Sobota RS, Stein CM, Kodaman N, Scheinfeldt LB, Maro I, Wieland-Alter W, Igo RP Jr, Magohe A, Malone LL, Chervenak K, Hall NB, Modongo C, Zetola N, Matee M, Joloba M, Froment A, Nyambo TB, Moore JH, Scott WK, Lahey T, Boom WH, von Reyn CF, Tishkoff SA, Sirugo G, Williams SM.

Am J Hum Genet. 2016 Mar 3;98(3):514-524. doi: 10.1016/j.ajhg.2016.01.015.


Variation in Rural African Gut Microbiota Is Strongly Correlated with Colonization by Entamoeba and Subsistence.

Morton ER, Lynch J, Froment A, Lafosse S, Heyer E, Przeworski M, Blekhman R, Ségurel L.

PLoS Genet. 2015 Nov 30;11(11):e1005658. doi: 10.1371/journal.pgen.1005658. eCollection 2015 Nov.


The epigenomic landscape of African rainforest hunter-gatherers and farmers.

Fagny M, Patin E, MacIsaac JL, Rotival M, Flutre T, Jones MJ, Siddle KJ, Quach H, Harmant C, McEwen LM, Froment A, Heyer E, Gessain A, Betsem E, Mouguiama-Daouda P, Hombert JM, Perry GH, Barreiro LB, Kobor MS, Quintana-Murci L.

Nat Commun. 2015 Nov 30;6:10047. doi: 10.1038/ncomms10047.


Growth pattern from birth to adulthood in African pygmies of known age.

Rozzi FV, Koudou Y, Froment A, Le Bouc Y, Botton J.

Nat Commun. 2015 Jul 28;6:7672. doi: 10.1038/ncomms8672.


A Severe Bite From a Nonhuman Primate Is a Major Risk Factor for HTLV-1 Infection in Hunters From Central Africa.

Filippone C, Betsem E, Tortevoye P, Cassar O, Bassot S, Froment A, Fontanet A, Gessain A.

Clin Infect Dis. 2015 Jun 1;60(11):1667-76. doi: 10.1093/cid/civ145. Epub 2015 Feb 25.


An extra dimension to decision-making in animals: the three-way trade-off between speed, effort per-unit-time and accuracy.

de Froment AJ, Rubenstein DI, Levin SA.

PLoS Comput Biol. 2014 Dec 18;10(12):e1003937. doi: 10.1371/journal.pcbi.1003937. eCollection 2014 Dec.


Did René Descartes have a giant ethmoidal sinus osteoma?

Charlier P, Froesch P, Benmoussa N, Froment A, Shorto R, Huynh-Charlier I.

Lancet. 2014 Oct 11;384(9951):1348. doi: 10.1016/S0140-6736(14)61816-X. No abstract available.


The timing and spatiotemporal patterning of Neanderthal disappearance.

Higham T, Douka K, Wood R, Ramsey CB, Brock F, Basell L, Camps M, Arrizabalaga A, Baena J, Barroso-Ruíz C, Bergman C, Boitard C, Boscato P, Caparrós M, Conard NJ, Draily C, Froment A, Galván B, Gambassini P, Garcia-Moreno A, Grimaldi S, Haesaerts P, Holt B, Iriarte-Chiapusso MJ, Jelinek A, Jordá Pardo JF, Maíllo-Fernández JM, Marom A, Maroto J, Menéndez M, Metz L, Morin E, Moroni A, Negrino F, Panagopoulou E, Peresani M, Pirson S, de la Rasilla M, Riel-Salvatore J, Ronchitelli A, Santamaria D, Semal P, Slimak L, Soler J, Soler N, Villaluenga A, Pinhasi R, Jacobi R.

Nature. 2014 Aug 21;512(7514):306-9. doi: 10.1038/nature13621.


Epidemiology and genetic variability of HHV-8/KSHV in Pygmy and Bantu populations in Cameroon.

Betsem E, Cassar O, Afonso PV, Fontanet A, Froment A, Gessain A.

PLoS Negl Trop Dis. 2014 May 15;8(5):e2851. doi: 10.1371/journal.pntd.0002851. eCollection 2014 May.


Limited evidence for adaptive evolution and functional effect of allelic variation at rs702424 in the promoter of the TAS2R16 bitter taste receptor gene in Africa.

Campbell MC, Ranciaro A, Zinshteyn D, Rawlings-Goss R, Hirbo J, Thompson S, Woldemeskel D, Froment A, Omar SA, Bodo JM, Nyambo T, Belay G, Drayna D, Breslin PA, Tishkoff SA.

J Hum Genet. 2014 Jun;59(6):349-52. doi: 10.1038/jhg.2014.29. Epub 2014 May 1.


Arterial calcifications from mummified materials: use of micro-CT-scan for histological differential diagnosis.

Charlier P, Wils P, Froment A, Huynh-Charlier I.

Forensic Sci Med Pathol. 2014 Sep;10(3):461-5. doi: 10.1007/s12024-014-9544-9. Epub 2014 Feb 28. No abstract available.


Genetic origins of lactase persistence and the spread of pastoralism in Africa.

Ranciaro A, Campbell MC, Hirbo JB, Ko WY, Froment A, Anagnostou P, Kotze MJ, Ibrahim M, Nyambo T, Omar SA, Tishkoff SA.

Am J Hum Genet. 2014 Apr 3;94(4):496-510. doi: 10.1016/j.ajhg.2014.02.009. Epub 2014 Mar 13.


The impact of agricultural emergence on the genetic history of African rainforest hunter-gatherers and agriculturalists.

Patin E, Siddle KJ, Laval G, Quach H, Harmant C, Becker N, Froment A, Régnault B, Lemée L, Gravel S, Hombert JM, Van der Veen L, Dominy NJ, Perry GH, Barreiro LB, Verdu P, Heyer E, Quintana-Murci L.

Nat Commun. 2014;5:3163. doi: 10.1038/ncomms4163.


Origin and differential selection of allelic variation at TAS2R16 associated with salicin bitter taste sensitivity in Africa.

Campbell MC, Ranciaro A, Zinshteyn D, Rawlings-Goss R, Hirbo J, Thompson S, Woldemeskel D, Froment A, Rucker JB, Omar SA, Bodo JM, Nyambo T, Belay G, Drayna D, Breslin PA, Tishkoff SA.

Mol Biol Evol. 2014 Feb;31(2):288-302. doi: 10.1093/molbev/mst211. Epub 2013 Oct 30.


Identifying Darwinian selection acting on different human APOL1 variants among diverse African populations.

Ko WY, Rajan P, Gomez F, Scheinfeldt L, An P, Winkler CA, Froment A, Nyambo TB, Omar SA, Wambebe C, Ranciaro A, Hirbo JB, Tishkoff SA.

Am J Hum Genet. 2013 Jul 11;93(1):54-66. doi: 10.1016/j.ajhg.2013.05.014. Epub 2013 Jun 13. Erratum in: Am J Hum Genet. 2013 Jul 11;93(1):191. An, Ping [added]; Winkler, Cheryl A [added].


Effect modification of aortic atheroma on the prognostic value of heart rate in hypertension.

Courand PY, Milon H, Gustin MP, Froment A, Bricca G, Lantelme P.

J Hypertens. 2013 Mar;31(3):484-91; discussion 491. doi: 10.1097/HJH.0b013e32835c44bb.


Patterns of nucleotide and haplotype diversity at ICAM-1 across global human populations with varying levels of malaria exposure.

Gomez F, Tomas G, Ko WY, Ranciaro A, Froment A, Ibrahim M, Lema G, Nyambo TB, Omar SA, Wambebe C, Hirbo JB, Rocha J, Tishkoff SA.

Hum Genet. 2013 Sep;132(9):987-99. doi: 10.1007/s00439-013-1284-5. Epub 2013 Apr 23.


[Modern biology, imagery and forensic medicine: contributions and limitations in examination of skeletal remains].

Lecomte D, Plu I, Froment A.

Bull Acad Natl Med. 2012 Jun;196(6):1103-15; discussion 1116. Review. French.


Higher frequency of genetic variants conferring increased risk for ADRs for commonly used drugs treating cancer, AIDS and tuberculosis in persons of African descent.

Aminkeng F, Ross CJ, Rassekh SR, Brunham LR, Sistonen J, Dube MP, Ibrahim M, Nyambo TB, Omar SA, Froment A, Bodo JM, Tishkoff S, Carleton BC, Hayden MR; Canadian Pharmacogenomics Network for Drug Safety Consortium.

Pharmacogenomics J. 2014 Apr;14(2):160-70. doi: 10.1038/tpj.2013.13. Epub 2013 Apr 16.


Comparison of various microalgae liquid biofuel production pathways based on energetic, economic and environmental criteria.

Delrue F, Li-Beisson Y, Setier PA, Sahut C, Roubaud A, Froment AK, Peltier G.

Bioresour Technol. 2013 May;136:205-12. doi: 10.1016/j.biortech.2013.02.091. Epub 2013 Mar 4.


Sociocultural behavior, sex-biased admixture, and effective population sizes in Central African Pygmies and non-Pygmies.

Verdu P, Becker NS, Froment A, Georges M, Grugni V, Quintana-Murci L, Hombert JM, Van der Veen L, Le Bomin S, Bahuchet S, Heyer E, Austerlitz F.

Mol Biol Evol. 2013 Apr;30(4):918-37. doi: 10.1093/molbev/mss328. Epub 2013 Jan 7.


The role of GHR and IGF1 genes in the genetic determination of African pygmies' short stature.

Becker NS, Verdu P, Georges M, Duquesnoy P, Froment A, Amselem S, Le Bouc Y, Heyer E.

Eur J Hum Genet. 2013 Jun;21(6):653-8. doi: 10.1038/ejhg.2012.223. Epub 2012 Oct 10.


Evolutionary history and adaptation from high-coverage whole-genome sequences of diverse African hunter-gatherers.

Lachance J, Vernot B, Elbers CC, Ferwerda B, Froment A, Bodo JM, Lema G, Fu W, Nyambo TB, Rebbeck TR, Zhang K, Akey JM, Tishkoff SA.

Cell. 2012 Aug 3;150(3):457-69. doi: 10.1016/j.cell.2012.07.009. Epub 2012 Jul 26.


Structural diversity and African origin of the 17q21.31 inversion polymorphism.

Steinberg KM, Antonacci F, Sudmant PH, Kidd JM, Campbell CD, Vives L, Malig M, Scheinfeldt L, Beggs W, Ibrahim M, Lema G, Nyambo TB, Omar SA, Bodo JM, Froment A, Donnelly MP, Kidd KK, Tishkoff SA, Eichler EE.

Nat Genet. 2012 Jul 1;44(8):872-80. doi: 10.1038/ng.2335.


Patterns of ancestry, signatures of natural selection, and genetic association with stature in Western African pygmies.

Jarvis JP, Scheinfeldt LB, Soi S, Lambert C, Omberg L, Ferwerda B, Froment A, Bodo JM, Beggs W, Hoffman G, Mezey J, Tishkoff SA.

PLoS Genet. 2012;8(4):e1002641. doi: 10.1371/journal.pgen.1002641. Epub 2012 Apr 26.


An economic, sustainability, and energetic model of biodiesel production from microalgae.

Delrue F, Setier PA, Sahut C, Cournac L, Roubaud A, Peltier G, Froment AK.

Bioresour Technol. 2012 May;111:191-200. doi: 10.1016/j.biortech.2012.02.020. Epub 2012 Feb 14.


Evolution of functionally diverse alleles associated with PTC bitter taste sensitivity in Africa.

Campbell MC, Ranciaro A, Froment A, Hirbo J, Omar S, Bodo JM, Nyambo T, Lema G, Zinshteyn D, Drayna D, Breslin PA, Tishkoff SA.

Mol Biol Evol. 2012 Apr;29(4):1141-53. doi: 10.1093/molbev/msr293. Epub 2011 Nov 29.


Worldwide distribution of allelic variation at the progesterone receptor locus and the incidence of female reproductive cancers.

Rockwell LC, Rowe EJ, Arnson K, Jackson F, Froment A, Ndumbe P, Seck B, Jackson R, Lorenz JG.

Am J Hum Biol. 2012 Jan-Feb;24(1):42-51. doi: 10.1002/ajhb.21233. Epub 2011 Nov 28.


Frequent and recent human acquisition of simian foamy viruses through apes' bites in central Africa.

Betsem E, Rua R, Tortevoye P, Froment A, Gessain A.

PLoS Pathog. 2011 Oct;7(10):e1002306. doi: 10.1371/journal.ppat.1002306. Epub 2011 Oct 27.


Characterization of genetic variation and natural selection at the arylamine N-acetyltransferase genes in global human populations.

Mortensen HM, Froment A, Lema G, Bodo JM, Ibrahim M, Nyambo TB, Omar SA, Tishkoff SA.

Pharmacogenomics. 2011 Nov;12(11):1545-58. doi: 10.2217/pgs.11.88. Epub 2011 Oct 13.


Effects of natural selection and gene conversion on the evolution of human glycophorins coding for MNS blood polymorphisms in malaria-endemic African populations.

Ko WY, Kaercher KA, Giombini E, Marcatili P, Froment A, Ibrahim M, Lema G, Nyambo TB, Omar SA, Wambebe C, Ranciaro A, Hirbo JB, Tishkoff SA.

Am J Hum Genet. 2011 Jun 10;88(6):741-754. doi: 10.1016/j.ajhg.2011.05.005.


Indirect evidence for the genetic determination of short stature in African Pygmies.

Becker NS, Verdu P, Froment A, Le Bomin S, Pagezy H, Bahuchet S, Heyer E.

Am J Phys Anthropol. 2011 Jul;145(3):390-401. doi: 10.1002/ajpa.21512. Epub 2011 May 3.


HTLV-2B strains, similar to those found in several Amerindian tribes, are endemic in central African Bakola Pygmies.

Mauclère P, Afonso PV, Meertens L, Plancoulaine S, Calattini S, Froment A, Van Beveren M, de Thé G, Quintana-Murci L, Mahieux R, Gessain A.

J Infect Dis. 2011 May 1;203(9):1316-23. doi: 10.1093/infdis/jir031.


Hepatitis B and C virus infections in the three Pygmy groups in Cameroon.

Foupouapouognigni Y, Mba SA, Betsem à Betsem E, Rousset D, Froment A, Gessain A, Njouom R.

J Clin Microbiol. 2011 Feb;49(2):737-40. doi: 10.1128/JCM.01475-10. Epub 2010 Nov 24.


Multiple retroviral infection by HTLV type 1, 2, 3 and simian foamy virus in a family of Pygmies from Cameroon.

Calattini S, Betsem E, Bassot S, Chevalier SA, Tortevoye P, Njouom R, Mahieux R, Froment A, Gessain A.

Virology. 2011 Feb 5;410(1):48-55. doi: 10.1016/j.virol.2010.10.025. Epub 2010 Nov 18.

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