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Items: 1 to 50 of 67

1.

DNA and RNA Stable Isotope Probing of Methylotrophic Methanogenic Archaea.

Yin X, Kulkarni AC, Friedrich MW.

Methods Mol Biol. 2019;2046:189-206. doi: 10.1007/978-1-4939-9721-3_15.

PMID:
31407306
2.

Functional Traits and Spatio-Temporal Structure of a Major Group of Soil Protists (Rhizaria: Cercozoa) in a Temperate Grassland.

Fiore-Donno AM, Richter-Heitmann T, Degrune F, Dumack K, Regan KM, Marhan S, Boeddinghaus RS, Rillig MC, Friedrich MW, Kandeler E, Bonkowski M.

Front Microbiol. 2019 Jun 11;10:1332. doi: 10.3389/fmicb.2019.01332. eCollection 2019. Erratum in: Front Microbiol. 2019 Jul 16;10:1654.

3.

Draft Genome Sequence of Streptomyces sp. Strain RFCAC02, Isolated from the Gut Microflora of the Pacific Chub Mackerel Scomber japonicus peruanus.

Serrano W, Olaechea RM, Wink J, Friedrich MW.

Microbiol Resour Announc. 2019 Jun 6;8(23). pii: e00355-19. doi: 10.1128/MRA.00355-19.

4.

CO2 conversion to methane and biomass in obligate methylotrophic methanogens in marine sediments.

Yin X, Wu W, Maeke M, Richter-Heitmann T, Kulkarni AC, Oni OE, Wendt J, Elvert M, Friedrich MW.

ISME J. 2019 Aug;13(8):2107-2119. doi: 10.1038/s41396-019-0425-9. Epub 2019 Apr 30.

PMID:
31040382
5.

Temperature Controls Crystalline Iron Oxide Utilization by Microbial Communities in Methanic Ferruginous Marine Sediment Incubations.

Aromokeye DA, Richter-Heitmann T, Oni OE, Kulkarni A, Yin X, Kasten S, Friedrich MW.

Front Microbiol. 2018 Oct 30;9:2574. doi: 10.3389/fmicb.2018.02574. eCollection 2018.

6.

Draft Genome Sequence of a New Vibrio Strain with the Potential To Produce Bacteriocin-Like Inhibitory Substances, Isolated from the Gut Microflora of Scallop (Argopecten purpuratus).

Serrano W, Tarazona UI, Olaechea RM, Friedrich MW.

Genome Announc. 2018 May 17;6(20). pii: e00419-18. doi: 10.1128/genomeA.00419-18.

7.

Stable Isotope Probing for Microbial Iron Reduction in Chocolate Pots Hot Spring, Yellowstone National Park.

Fortney NW, He S, Kulkarni A, Friedrich MW, Holz C, Boyd ES, Roden EE.

Appl Environ Microbiol. 2018 May 17;84(11). pii: e02894-17. doi: 10.1128/AEM.02894-17. Print 2018 Jun 1.

8.

Bacterial Diversity and Biogeochemistry of Two Marine Shallow-Water Hydrothermal Systems off Dominica (Lesser Antilles).

Pop Ristova P, Pichler T, Friedrich MW, Bühring SI.

Front Microbiol. 2017 Dec 4;8:2400. doi: 10.3389/fmicb.2017.02400. eCollection 2017.

9.

Draft Genome Sequence of Vibrio sp. Strain V1B Isolated from the Gut Microflora of the Scallop Argopecten purpuratus.

Serrano W, Tarazona UI, Olaechea RM, Friedrich MW.

Genome Announc. 2017 Oct 19;5(42). pii: e01130-17. doi: 10.1128/genomeA.01130-17.

10.

Nitrogen Metabolism Genes from Temperate Marine Sediments.

Reyes C, Schneider D, Lipka M, Thürmer A, Böttcher ME, Friedrich MW.

Mar Biotechnol (NY). 2017 Apr;19(2):175-190. doi: 10.1007/s10126-017-9741-0. Epub 2017 Mar 10.

11.

Metal Oxide Reduction Linked to Anaerobic Methane Oxidation.

Oni OE, Friedrich MW.

Trends Microbiol. 2017 Feb;25(2):88-90. doi: 10.1016/j.tim.2016.12.001. Epub 2016 Dec 13.

PMID:
27986381
12.

Evaluation of Strategies to Separate Root-Associated Microbial Communities: A Crucial Choice in Rhizobiome Research.

Richter-Heitmann T, Eickhorst T, Knauth S, Friedrich MW, Schmidt H.

Front Microbiol. 2016 May 24;7:773. doi: 10.3389/fmicb.2016.00773. eCollection 2016.

13.

Bacterial communities potentially involved in iron-cycling in Baltic Sea and North Sea sediments revealed by pyrosequencing.

Reyes C, Dellwig O, Dähnke K, Gehre M, Noriega-Ortega BE, Böttcher ME, Meister P, Friedrich MW.

FEMS Microbiol Ecol. 2016 Apr;92(4):fiw054. doi: 10.1093/femsec/fiw054. Epub 2016 Mar 8.

PMID:
26960392
14.

Spatial Interaction of Archaeal Ammonia-Oxidizers and Nitrite-Oxidizing Bacteria in an Unfertilized Grassland Soil.

Stempfhuber B, Richter-Heitmann T, Regan KM, Kölbl A, Wüst PK, Marhan S, Sikorski J, Overmann J, Friedrich MW, Kandeler E, Schloter M.

Front Microbiol. 2016 Jan 22;6:1567. doi: 10.3389/fmicb.2015.01567. eCollection 2015.

15.

Microbial Communities and Organic Matter Composition in Surface and Subsurface Sediments of the Helgoland Mud Area, North Sea.

Oni OE, Schmidt F, Miyatake T, Kasten S, Witt M, Hinrichs KU, Friedrich MW.

Front Microbiol. 2015 Nov 25;6:1290. doi: 10.3389/fmicb.2015.01290. eCollection 2015.

16.

Isolation of microorganisms involved in reduction of crystalline iron(III) oxides in natural environments.

Hori T, Aoyagi T, Itoh H, Narihiro T, Oikawa A, Suzuki K, Ogata A, Friedrich MW, Conrad R, Kamagata Y.

Front Microbiol. 2015 May 5;6:386. doi: 10.3389/fmicb.2015.00386. eCollection 2015.

17.

Distinct microbial populations are tightly linked to the profile of dissolved iron in the methanic sediments of the Helgoland mud area, North Sea.

Oni O, Miyatake T, Kasten S, Richter-Heitmann T, Fischer D, Wagenknecht L, Kulkarni A, Blumers M, Shylin SI, Ksenofontov V, Costa BF, Klingelhöfer G, Friedrich MW.

Front Microbiol. 2015 May 1;6:365. doi: 10.3389/fmicb.2015.00365. eCollection 2015.

18.

Geobacter, Anaeromyxobacter and Anaerolineae populations are enriched on anodes of root exudate-driven microbial fuel cells in rice field soil.

Cabezas A, Pommerenke B, Boon N, Friedrich MW.

Environ Microbiol Rep. 2015 Jun;7(3):489-97. doi: 10.1111/1758-2229.12277. Epub 2015 Apr 6.

PMID:
25683328
19.

Ultra-high-sensitivity stable-isotope probing of rRNA by high-throughput sequencing of isopycnic centrifugation gradients.

Aoyagi T, Hanada S, Itoh H, Sato Y, Ogata A, Friedrich MW, Kikuchi Y, Hori T.

Environ Microbiol Rep. 2015 Apr;7(2):282-7. doi: 10.1111/1758-2229.12243. Epub 2015 Jan 23.

PMID:
25403652
20.

Geochemistry. How sulfur beats iron.

Friedrich MW, Finster KW.

Science. 2014 May 30;344(6187):974-5. doi: 10.1126/science.1255442. No abstract available.

PMID:
24876481
21.

Determinants of Acidobacteria activity inferred from the relative abundances of 16S rRNA transcripts in German grassland and forest soils.

Foesel BU, Nägele V, Naether A, Wüst PK, Weinert J, Bonkowski M, Lohaus G, Polle A, Alt F, Oelmann Y, Fischer M, Friedrich MW, Overmann J.

Environ Microbiol. 2014 Mar;16(3):658-75. doi: 10.1111/1462-2920.12162. Epub 2013 Jun 26.

PMID:
23802854
22.

Environmental factors affect Acidobacterial communities below the subgroup level in grassland and forest soils.

Naether A, Foesel BU, Naegele V, Wüst PK, Weinert J, Bonkowski M, Alt F, Oelmann Y, Polle A, Lohaus G, Gockel S, Hemp A, Kalko EK, Linsenmair KE, Pfeiffer S, Renner S, Schöning I, Weisser WW, Wells K, Fischer M, Overmann J, Friedrich MW.

Appl Environ Microbiol. 2012 Oct;78(20):7398-406. Epub 2012 Aug 10.

23.

Three manganese oxide-rich marine sediments harbor similar communities of acetate-oxidizing manganese-reducing bacteria.

Vandieken V, Pester M, Finke N, Hyun JH, Friedrich MW, Loy A, Thamdrup B.

ISME J. 2012 Nov;6(11):2078-90. doi: 10.1038/ismej.2012.41. Epub 2012 May 10.

24.

Sulfate-reducing microorganisms in wetlands - fameless actors in carbon cycling and climate change.

Pester M, Knorr KH, Friedrich MW, Wagner M, Loy A.

Front Microbiol. 2012 Feb 28;3:72. doi: 10.3389/fmicb.2012.00072. eCollection 2012.

25.

The microbial ecology of electrigenic microorganisms in plant-rhizosphere based microbial fuel cells.

Friedrich MW.

Commun Agric Appl Biol Sci. 2011;76(2):25-6. No abstract available.

PMID:
21404927
26.

Metagenomic analysis of isotopically enriched DNA.

Chen Y, Neufeld JD, Dumont MG, Friedrich MW, Murrell JC.

Methods Mol Biol. 2010;668:67-75. doi: 10.1007/978-1-60761-823-2_4.

PMID:
20830556
27.

Imaging CREB activation in living cells.

Friedrich MW, Aramuni G, Mank M, Mackinnon JA, Griesbeck O.

J Biol Chem. 2010 Jul 23;285(30):23285-95. doi: 10.1074/jbc.M110.124545. Epub 2010 May 18.

28.

Microbial community analysis of anodes from sediment microbial fuel cells powered by rhizodeposits of living rice plants.

De Schamphelaire L, Cabezas A, Marzorati M, Friedrich MW, Boon N, Verstraete W.

Appl Environ Microbiol. 2010 Mar;76(6):2002-8. doi: 10.1128/AEM.02432-09. Epub 2010 Jan 22.

29.

Identification of iron-reducing microorganisms in anoxic rice paddy soil by 13C-acetate probing.

Hori T, Müller A, Igarashi Y, Conrad R, Friedrich MW.

ISME J. 2010 Feb;4(2):267-78. doi: 10.1038/ismej.2009.100. Epub 2009 Sep 24.

PMID:
19776769
30.

Novel uncultured Chloroflexi dechlorinate perchloroethene to trans-dichloroethene in tidal flat sediments.

Kittelmann S, Friedrich MW.

Environ Microbiol. 2008 Jun;10(6):1557-70. doi: 10.1111/j.1462-2920.2008.01571.x. Epub 2008 Mar 3.

PMID:
18318716
31.

Identification of novel perchloroethene-respiring microorganisms in anoxic river sediment by RNA-based stable isotope probing.

Kittelmann S, Friedrich MW.

Environ Microbiol. 2008 Jan;10(1):31-46. doi: 10.1111/j.1462-2920.2007.01427.x.

PMID:
18211265
32.

DNA stable-isotope probing.

Neufeld JD, Vohra J, Dumont MG, Lueders T, Manefield M, Friedrich MW, Murrell JC.

Nat Protoc. 2007;2(4):860-6.

PMID:
17446886
33.

shift from acetoclastic to H2-dependent methanogenesis in a west Siberian peat bog at low pH values and isolation of an acidophilic Methanobacterium strain.

Kotsyurbenko OR, Friedrich MW, Simankova MV, Nozhevnikova AN, Golyshin PN, Timmis KN, Conrad R.

Appl Environ Microbiol. 2007 Apr;73(7):2344-8. Epub 2007 Feb 2.

34.

Methane oxidation in termite hindguts: absence of evidence and evidence of absence.

Pester M, Tholen A, Friedrich MW, Brune A.

Appl Environ Microbiol. 2007 Mar;73(6):2024-8. Epub 2007 Jan 19.

35.

Improved calcium imaging in transgenic mice expressing a troponin C-based biosensor.

Heim N, Garaschuk O, Friedrich MW, Mank M, Milos RI, Kovalchuk Y, Konnerth A, Griesbeck O.

Nat Methods. 2007 Feb;4(2):127-9. Epub 2007 Jan 28.

PMID:
17259991
36.

Identification of acetate-assimilating microorganisms under methanogenic conditions in anoxic rice field soil by comparative stable isotope probing of RNA.

Hori T, Noll M, Igarashi Y, Friedrich MW, Conrad R.

Appl Environ Microbiol. 2007 Jan;73(1):101-9. Epub 2006 Oct 27.

37.

Identification of bacterial micropredators distinctively active in a soil microbial food web.

Lueders T, Kindler R, Miltner A, Friedrich MW, Kaestner M.

Appl Environ Microbiol. 2006 Aug;72(8):5342-8.

38.

Diversity and ubiquity of thermophilic methanogenic archaea in temperate anoxic soils.

Wu XL, Friedrich MW, Conrad R.

Environ Microbiol. 2006 Mar;8(3):394-404.

PMID:
16478446
39.

Stable-isotope probing of DNA: insights into the function of uncultivated microorganisms from isotopically labeled metagenomes.

Friedrich MW.

Curr Opin Biotechnol. 2006 Feb;17(1):59-66. Epub 2006 Jan 11. Review.

PMID:
16376070
40.

Characterization of the psychrotolerant acetogen strain SyrA5 and the emended description of the species Acetobacterium carbinolicum.

Paarup M, Friedrich MW, Tindall BJ, Finster K.

Antonie Van Leeuwenhoek. 2006 Jan;89(1):55-69. Epub 2005 Dec 3.

PMID:
16344912
41.

A FRET-based calcium biosensor with fast signal kinetics and high fluorescence change.

Mank M, Reiff DF, Heim N, Friedrich MW, Borst A, Griesbeck O.

Biophys J. 2006 Mar 1;90(5):1790-6. Epub 2005 Dec 9.

42.

Functional marker genes for identification of sulfate-reducing prokaryotes.

Wagner M, Loy A, Klein M, Lee N, Ramsing NB, Stahl DA, Friedrich MW.

Methods Enzymol. 2005;397:469-89.

PMID:
16260310
44.

Structure and topology of microbial communities in the major gut compartments of Melolontha melolontha larvae (Coleoptera: Scarabaeidae).

Egert M, Stingl U, Bruun LD, Pommerenke B, Brune A, Friedrich MW.

Appl Environ Microbiol. 2005 Aug;71(8):4556-66.

45.

Lateral gene transfer of dissimilatory (bi)sulfite reductase revisited.

Zverlov V, Klein M, Lücker S, Friedrich MW, Kellermann J, Stahl DA, Loy A, Wagner M.

J Bacteriol. 2005 Mar;187(6):2203-8.

46.

Detecting active methanogenic populations on rice roots using stable isotope probing.

Lu Y, Lueders T, Friedrich MW, Conrad R.

Environ Microbiol. 2005 Mar;7(3):326-36.

PMID:
15683393
47.
48.
49.

Archaeal community structure and pathway of methane formation on rice roots.

Chin KJ, Lueders T, Friedrich MW, Klose M, Conrad R.

Microb Ecol. 2004 Jan;47(1):59-67.

PMID:
15259270
50.

Methanobacterium aarhusense sp. nov., a novel methanogen isolated from a marine sediment (Aarhus Bay, Denmark).

Shlimon AG, Friedrich MW, Niemann H, Ramsing NB, Finster K.

Int J Syst Evol Microbiol. 2004 May;54(Pt 3):759-63.

PMID:
15143021

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