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Items: 25

1.

Increased virulence of the oral microbiome in oral squamous cell carcinoma revealed by metatranscriptome analyses.

Yost S, Stashenko P, Choi Y, Kukuruzinska M, Genco CA, Salama A, Weinberg EO, Kramer CD, Frias-Lopez J.

Int J Oral Sci. 2018 Nov 12;10(4):32. doi: 10.1038/s41368-018-0037-7.

2.

The effect of the stress hormone cortisol on the metatranscriptome of the oral microbiome.

Duran-Pinedo AE, Solbiati J, Frias-Lopez J.

NPJ Biofilms Microbiomes. 2018 Oct 18;4:25. doi: 10.1038/s41522-018-0068-z. eCollection 2018.

3.

Functional profiles of coronal and dentin caries in children.

Kressirer CA, Chen T, Lake Harriman K, Frias-Lopez J, Dewhirst FE, Tavares MA, Tanner AC.

J Oral Microbiol. 2018 Jul 16;10(1):1495976. doi: 10.1080/20002297.2018.1495976. eCollection 2018.

4.

Metatranscriptome of the Oral Microbiome in Health and Disease.

Solbiati J, Frias-Lopez J.

J Dent Res. 2018 May;97(5):492-500. doi: 10.1177/0022034518761644. Epub 2018 Mar 8. Review.

5.

Potassium is a key signal in host-microbiome dysbiosis in periodontitis.

Yost S, Duran-Pinedo AE, Krishnan K, Frias-Lopez J.

PLoS Pathog. 2017 Jun 20;13(6):e1006457. doi: 10.1371/journal.ppat.1006457. eCollection 2017 Jun.

6.

Erratum to: Functional signatures of oral dysbiosis during periodontitis progression revealed by microbial metatranscriptome analysis.

Yost S, Duran-Pinedo AE, Teles R, Krishnan K, Frias-Lopez J.

Genome Med. 2015 Oct 27;7(1):111. doi: 10.1186/s13073-015-0231-6. No abstract available.

7.

Targeting specific bacteria in the oral microbiome.

Frias-Lopez J.

Trends Microbiol. 2015 Sep;23(9):527-8. doi: 10.1016/j.tim.2015.07.004. Epub 2015 Jul 24.

PMID:
26215711
8.

Small RNA Transcriptome of the Oral Microbiome during Periodontitis Progression.

Duran-Pinedo AE, Yost S, Frias-Lopez J.

Appl Environ Microbiol. 2015 Oct;81(19):6688-99. doi: 10.1128/AEM.01782-15. Epub 2015 Jul 17.

9.

Functional signatures of oral dysbiosis during periodontitis progression revealed by microbial metatranscriptome analysis.

Yost S, Duran-Pinedo AE, Teles R, Krishnan K, Frias-Lopez J.

Genome Med. 2015 Apr 27;7(1):27. doi: 10.1186/s13073-015-0153-3. eCollection 2015. Erratum in: Genome Med. 2015;7(1):111.

10.

Beyond microbial community composition: functional activities of the oral microbiome in health and disease.

Duran-Pinedo AE, Frias-Lopez J.

Microbes Infect. 2015 Jul;17(7):505-16. doi: 10.1016/j.micinf.2015.03.014. Epub 2015 Apr 7.

11.

The periodontal pathogen Porphyromonas gingivalis induces expression of transposases and cell death of Streptococcus mitis in a biofilm model.

Duran-Pinedo AE, Baker VD, Frias-Lopez J.

Infect Immun. 2014 Aug;82(8):3374-82. doi: 10.1128/IAI.01976-14. Epub 2014 May 27.

12.

Community-wide transcriptome of the oral microbiome in subjects with and without periodontitis.

Duran-Pinedo AE, Chen T, Teles R, Starr JR, Wang X, Krishnan K, Frias-Lopez J.

ISME J. 2014 Aug;8(8):1659-72. doi: 10.1038/ismej.2014.23. Epub 2014 Mar 6.

13.

Transplantation-associated long-term immunosuppression promotes oral colonization by potentially opportunistic pathogens without impacting other members of the salivary bacteriome.

Diaz PI, Hong BY, Frias-Lopez J, Dupuy AK, Angeloni M, Abusleme L, Terzi E, Ioannidou E, Strausbaugh LD, Dongari-Bagtzoglou A.

Clin Vaccine Immunol. 2013 Jun;20(6):920-30. doi: 10.1128/CVI.00734-12. Epub 2013 Apr 24.

14.

Lessons learned and unlearned in periodontal microbiology.

Teles R, Teles F, Frias-Lopez J, Paster B, Haffajee A.

Periodontol 2000. 2013 Jun;62(1):95-162. doi: 10.1111/prd.12010. Review.

15.

Effect of periodontal pathogens on the metatranscriptome of a healthy multispecies biofilm model.

Frias-Lopez J, Duran-Pinedo A.

J Bacteriol. 2012 Apr;194(8):2082-95. doi: 10.1128/JB.06328-11. Epub 2012 Feb 10.

16.

Correlation network analysis applied to complex biofilm communities.

Duran-Pinedo AE, Paster B, Teles R, Frias-Lopez J.

PLoS One. 2011;6(12):e28438. doi: 10.1371/journal.pone.0028438. Epub 2011 Dec 7.

17.

Temporal dynamics of Prochlorococcus ecotypes in the Atlantic and Pacific oceans.

Malmstrom RR, Coe A, Kettler GC, Martiny AC, Frias-Lopez J, Zinser ER, Chisholm SW.

ISME J. 2010 Oct;4(10):1252-64. doi: 10.1038/ismej.2010.60. Epub 2010 May 13.

PMID:
20463762
18.

UV hyper-resistance in Prochlorococcus MED4 results from a single base pair deletion just upstream of an operon encoding nudix hydrolase and photolyase.

Osburne MS, Holmbeck BM, Frias-Lopez J, Steen R, Huang K, Kelly L, Coe A, Waraska K, Gagne A, Chisholm SW.

Environ Microbiol. 2010 Jul;12(7):1978-88. doi: 10.1111/j.1462-2920.2010.02203.x. Epub 2010 Mar 23.

19.

Use of stable isotope-labelled cells to identify active grazers of picocyanobacteria in ocean surface waters.

Frias-Lopez J, Thompson A, Waldbauer J, Chisholm SW.

Environ Microbiol. 2009 Feb;11(2):512-25. doi: 10.1111/j.1462-2920.2008.01793.x.

20.

Microbial community gene expression in ocean surface waters.

Frias-Lopez J, Shi Y, Tyson GW, Coleman ML, Schuster SC, Chisholm SW, Delong EF.

Proc Natl Acad Sci U S A. 2008 Mar 11;105(10):3805-10. doi: 10.1073/pnas.0708897105. Epub 2008 Mar 3.

21.

Bacterial community associated with black band disease in corals.

Frias-Lopez J, Klaus JS, Bonheyo GT, Fouke BW.

Appl Environ Microbiol. 2004 Oct;70(10):5955-62.

22.
23.

Cyanobacteria associated with coral black band disease in Caribbean and Indo-Pacific Reefs.

Frias-Lopez J, Bonheyo GT, Jin Q, Fouke BW.

Appl Environ Microbiol. 2003 Apr;69(4):2409-13.

24.

Partitioning of bacterial communities between seawater and healthy, black band diseased, and dead coral surfaces.

Frias-Lopez J, Zerkle AL, Bonheyo GT, Fouke BW.

Appl Environ Microbiol. 2002 May;68(5):2214-28.

25.

Identification of cell wall proteins of Bacteroides fragilis to which bacteriophage B40-8 binds specifically.

Puig A, Araujo R, Jofre J, Frias-Lopez J.

Microbiology. 2001 Feb;147(Pt 2):281-8.

PMID:
11158345

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