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Items: 22

1.

Transcriptomic analysis of cellular pathways in healing flexor tendons of plasminogen activator inhibitor 1 (PAI-1/Serpine1) null mice.

Freeberg MAT, Easa A, Lillis JA, Benoit DSW, van Wijnen AJ, Awad HA.

J Orthop Res. 2019 Aug 19. doi: 10.1002/jor.24448. [Epub ahead of print]

PMID:
31424116
2.

Community-Driven Data Analysis Training for Biology.

Batut B, Hiltemann S, Bagnacani A, Baker D, Bhardwaj V, Blank C, Bretaudeau A, Brillet-Guéguen L, Čech M, Chilton J, Clements D, Doppelt-Azeroual O, Erxleben A, Freeberg MA, Gladman S, Hoogstrate Y, Hotz HR, Houwaart T, Jagtap P, Larivière D, Le Corguillé G, Manke T, Mareuil F, Ramírez F, Ryan D, Sigloch FC, Soranzo N, Wolff J, Videm P, Wolfien M, Wubuli A, Yusuf D; Galaxy Training Network, Taylor J, Backofen R, Nekrutenko A, Grüning B.

Cell Syst. 2018 Jun 27;6(6):752-758.e1. doi: 10.1016/j.cels.2018.05.012.

3.

A Novel Long Non-Coding RNA in the hTERT Promoter Region Regulates hTERT Expression.

Malhotra S, Freeberg MA, Winans SJ, Taylor J, Beemon KL.

Noncoding RNA. 2017 Dec 29;4(1). pii: E1. doi: 10.3390/ncrna4010001.

4.

Serpine1 Knockdown Enhances MMP Activity after Flexor Tendon Injury in Mice: Implications for Adhesions Therapy.

Freeberg MAT, Farhat YM, Easa A, Kallenbach JG, Malcolm DW, Buckley MR, Benoit DSW, Awad HA.

Sci Rep. 2018 Apr 11;8(1):5810. doi: 10.1038/s41598-018-24144-1.

5.

Diblock Copolymer Hydrophobicity Facilitates Efficient Gene Silencing and Cytocompatible Nanoparticle-Mediated siRNA Delivery to Musculoskeletal Cell Types.

Malcolm DW, Freeberg MAT, Wang Y, Sims KR Jr, Awad HA, Benoit DSW.

Biomacromolecules. 2017 Nov 13;18(11):3753-3765. doi: 10.1021/acs.biomac.7b01349. Epub 2017 Oct 11.

6.

Glycolytic Enzymes Coalesce in G Bodies under Hypoxic Stress.

Jin M, Fuller GG, Han T, Yao Y, Alessi AF, Freeberg MA, Roach NP, Moresco JJ, Karnovsky A, Baba M, Yates JR 3rd, Gitler AD, Inoki K, Klionsky DJ, Kim JK.

Cell Rep. 2017 Jul 25;20(4):895-908. doi: 10.1016/j.celrep.2017.06.082.

7.

"Long-term stability of stimulating spiral nerve cuff electrodes on human peripheral nerves".

Christie BP, Freeberg M, Memberg WD, Pinault GJC, Hoyen HA, Tyler DJ, Triolo RJ.

J Neuroeng Rehabil. 2017 Jul 11;14(1):70. doi: 10.1186/s12984-017-0285-3.

8.

LARP1 functions as a molecular switch for mTORC1-mediated translation of an essential class of mRNAs.

Hong S, Freeberg MA, Han T, Kamath A, Yao Y, Fukuda T, Suzuki T, Kim JK, Inoki K.

Elife. 2017 Jun 26;6. pii: e25237. doi: 10.7554/eLife.25237.

9.

MORC-1 Integrates Nuclear RNAi and Transgenerational Chromatin Architecture to Promote Germline Immortality.

Weiser NE, Yang DX, Feng S, Kalinava N, Brown KC, Khanikar J, Freeberg MA, Snyder MJ, Csankovszki G, Chan RC, Gu SG, Montgomery TA, Jacobsen SE, Kim JK.

Dev Cell. 2017 May 22;41(4):408-423.e7. doi: 10.1016/j.devcel.2017.04.023.

10.

The design of and chronic tissue response to a composite nerve electrode with patterned stiffness.

Freeberg MJ, Stone MA, Triolo RJ, Tyler DJ.

J Neural Eng. 2017 Jun;14(3):036022. doi: 10.1088/1741-2552/aa6632. Epub 2017 Mar 13.

11.

Casein kinase II promotes target silencing by miRISC through direct phosphorylation of the DEAD-box RNA helicase CGH-1.

Alessi AF, Khivansara V, Han T, Freeberg MA, Moresco JJ, Tu PG, Montoye E, Yates JR 3rd, Karp X, Kim JK.

Proc Natl Acad Sci U S A. 2015 Dec 29;112(52):E7213-22. doi: 10.1073/pnas.1509499112. Epub 2015 Dec 15. Erratum in: Proc Natl Acad Sci U S A. 2016 Feb 16;113(7):E942.

12.

Tissue engineering strategies for promoting vascularized bone regeneration.

Almubarak S, Nethercott H, Freeberg M, Beaudon C, Jha A, Jackson W, Marcucio R, Miclau T, Healy K, Bahney C.

Bone. 2016 Feb;83:197-209. doi: 10.1016/j.bone.2015.11.011. Epub 2015 Nov 19. Review.

13.

Mapping the Transcriptome-Wide Landscape of RBP Binding Sites Using gPAR-CLIP-seq: Bioinformatic Analysis.

Freeberg MA, Kim JK.

Methods Mol Biol. 2016;1361:91-104. doi: 10.1007/978-1-4939-3079-1_6.

PMID:
26483018
14.

Transcriptional regulation by Pho23 modulates the frequency of autophagosome formation.

Jin M, He D, Backues SK, Freeberg MA, Liu X, Kim JK, Klionsky DJ.

Curr Biol. 2014 Jun 16;24(12):1314-1322. doi: 10.1016/j.cub.2014.04.048. Epub 2014 May 29.

15.

Selective activation of the human tibial and common peroneal nerves with a flat interface nerve electrode.

Schiefer MA, Freeberg M, Pinault GJ, Anderson J, Hoyen H, Tyler DJ, Triolo RJ.

J Neural Eng. 2013 Oct;10(5):056006. doi: 10.1088/1741-2560/10/5/056006. Epub 2013 Aug 5.

16.

A conserved upstream motif orchestrates autonomous, germline-enriched expression of Caenorhabditis elegans piRNAs.

Billi AC, Freeberg MA, Day AM, Chun SY, Khivansara V, Kim JK.

PLoS Genet. 2013;9(3):e1003392. doi: 10.1371/journal.pgen.1003392. Epub 2013 Mar 14.

17.

Pervasive and dynamic protein binding sites of the mRNA transcriptome in Saccharomyces cerevisiae.

Freeberg MA, Han T, Moresco JJ, Kong A, Yang YC, Lu ZJ, Yates JR, Kim JK.

Genome Biol. 2013 Feb 14;14(2):R13. doi: 10.1186/gb-2013-14-2-r13.

18.

piRNAs and siRNAs collaborate in Caenorhabditis elegans genome defense.

Billi AC, Freeberg MA, Kim JK.

Genome Biol. 2012 Jul 20;13(7):164. doi: 10.1186/gb-2012-13-7-164.

19.

The Caenorhabditis elegans HEN1 ortholog, HENN-1, methylates and stabilizes select subclasses of germline small RNAs.

Billi AC, Alessi AF, Khivansara V, Han T, Freeberg M, Mitani S, Kim JK.

PLoS Genet. 2012;8(4):e1002617. doi: 10.1371/journal.pgen.1002617. Epub 2012 Apr 19.

20.

Efficient search and fit methods to find nerve stimulation parameters for multi-contact electrodes.

Freeberg MJ, Schiefer MA, Triolo RJ.

Conf Proc IEEE Eng Med Biol Soc. 2011;2011:7238-41. doi: 10.1109/IEMBS.2011.6091829.

21.

Influencing behavior to improve attendance at occupational therapy in a psychiatric setting.

Zschokke J, Freeberg MR, Errickson E.

Am J Occup Ther. 1975 Nov-Dec;29(10):625-7.

PMID:
1181939
22.

Participation in a Department of Health, Education, and Welfare project. Monitoring patient care.

Freeberg ML.

NLN Publ. 1975;(52-1572):21-3. No abstract available.

PMID:
1040841

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