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Items: 16

1.

Resistome analyses of sputum from COPD and healthy subjects reveals bacterial load-related prevalence of target genes.

Ramsheh MY, Haldar K, Bafadhel M, George L, Free RC, John C, Reeve NF, Ziegler-Heitbrock L, Gut I, Singh D, Mistry V, Tobin MD, Oggioni MR, Brightling C, Barer MR.

Thorax. 2020 Jan;75(1):8-16. doi: 10.1136/thoraxjnl-2019-213485. Epub 2019 Nov 7.

PMID:
31699806
2.

Cohort profile: Extended Cohort for E-health, Environment and DNA (EXCEED).

John C, Reeve NF, Free RC, Williams AT, Ntalla I, Farmaki AE, Bethea J, Barton LM, Shrine N, Batini C, Packer R, Terry S, Hargadon B, Wang Q, Melbourne CA, Adams EL, Bee CE, Harrington K, Miola J, Brunskill NJ, Brightling CE, Barwell J, Wallace SE, Hsu R, Shepherd DJ, Hollox EJ, Wain LV, Tobin MD.

Int J Epidemiol. 2019 Oct 1;48(5):1734. doi: 10.1093/ije/dyz175. No abstract available.

3.

Cohort Profile: Extended Cohort for E-health, Environment and DNA (EXCEED).

John C, Reeve NF, Free RC, Williams AT, Ntalla I, Farmaki AE, Bethea J, Barton LM, Shrine N, Batini C, Packer R, Terry S, Hargadon B, Wang Q, Melbourne CA, Adams EL, Bee CE, Harrington K, Miola J, Brunskill NJ, Brightling CE, Barwell J, Wallace SE, Hsu R, Shepherd DJ, Hollox EJ, Wain LV, Tobin MD.

Int J Epidemiol. 2019 Jun 1;48(3):678-679j. doi: 10.1093/ije/dyz073. No abstract available. Erratum in: Int J Epidemiol. 2019 Oct 1;48(5):1734.

4.

Assessment of breath volatile organic compounds in acute cardiorespiratory breathlessness: a protocol describing a prospective real-world observational study.

Ibrahim W, Wilde M, Cordell R, Salman D, Ruszkiewicz D, Bryant L, Richardson M, Free RC, Zhao B, Yousuf A, White C, Russell R, Jones S, Patel B, Awal A, Phillips R, Fowkes G, McNally T, Foxon C, Bhatt H, Peltrini R, Singapuri A, Hargadon B, Suzuki T, Ng LL, Gaillard E, Beardsmore C, Ryanna K, Pandya H, Coates T, Monks PS, Greening N, Brightling CE, Thomas P, Siddiqui S.

BMJ Open. 2019 Mar 8;9(3):e025486. doi: 10.1136/bmjopen-2018-025486.

5.

Breath analysis by two-dimensional gas chromatography with dual flame ionisation and mass spectrometric detection - Method optimisation and integration within a large-scale clinical study.

Wilde MJ, Cordell RL, Salman D, Zhao B, Ibrahim W, Bryant L, Ruszkiewicz D, Singapuri A, Free RC, Gaillard EA, Beardsmore C, Thomas CLP, Brightling CE, Siddiqui S, Monks PS.

J Chromatogr A. 2019 Jun 7;1594:160-172. doi: 10.1016/j.chroma.2019.02.001. Epub 2019 Feb 5.

6.

A nested case-control study of predictors for tuberculosis recurrence in a large UK Centre.

Rosser A, Richardson M, Wiselka MJ, Free RC, Woltmann G, Mukamolova GV, Pareek M.

BMC Infect Dis. 2018 Feb 27;18(1):94. doi: 10.1186/s12879-017-2933-4.

7.

The relationship between the Leicester cough questionnaire, eosinophilic airway inflammation and asthma patient related outcomes in severe adult asthma.

Natarajan S, Free RC, Bradding P, McGarvey L, Siddiqui S.

Respir Res. 2017 Mar 4;18(1):44. doi: 10.1186/s12931-017-0520-2.

8.

Comprehensive respiratory assessment in advanced COPD: a 'campus to clinic' translational framework.

Steiner MC, Evans RA, Greening NJ, Free RC, Woltmann G, Toms N, Morgan MD.

Thorax. 2015 Aug;70(8):805-8. doi: 10.1136/thoraxjnl-2015-206948. Epub 2015 May 11. Review. No abstract available.

PMID:
25964314
9.

The BioMart community portal: an innovative alternative to large, centralized data repositories.

Smedley D, Haider S, Durinck S, Pandini L, Provero P, Allen J, Arnaiz O, Awedh MH, Baldock R, Barbiera G, Bardou P, Beck T, Blake A, Bonierbale M, Brookes AJ, Bucci G, Buetti I, Burge S, Cabau C, Carlson JW, Chelala C, Chrysostomou C, Cittaro D, Collin O, Cordova R, Cutts RJ, Dassi E, Di Genova A, Djari A, Esposito A, Estrella H, Eyras E, Fernandez-Banet J, Forbes S, Free RC, Fujisawa T, Gadaleta E, Garcia-Manteiga JM, Goodstein D, Gray K, Guerra-Assunção JA, Haggarty B, Han DJ, Han BW, Harris T, Harshbarger J, Hastings RK, Hayes RD, Hoede C, Hu S, Hu ZL, Hutchins L, Kan Z, Kawaji H, Keliet A, Kerhornou A, Kim S, Kinsella R, Klopp C, Kong L, Lawson D, Lazarevic D, Lee JH, Letellier T, Li CY, Lio P, Liu CJ, Luo J, Maass A, Mariette J, Maurel T, Merella S, Mohamed AM, Moreews F, Nabihoudine I, Ndegwa N, Noirot C, Perez-Llamas C, Primig M, Quattrone A, Quesneville H, Rambaldi D, Reecy J, Riba M, Rosanoff S, Saddiq AA, Salas E, Sallou O, Shepherd R, Simon R, Sperling L, Spooner W, Staines DM, Steinbach D, Stone K, Stupka E, Teague JW, Dayem Ullah AZ, Wang J, Ware D, Wong-Erasmus M, Youens-Clark K, Zadissa A, Zhang SJ, Kasprzyk A.

Nucleic Acids Res. 2015 Jul 1;43(W1):W589-98. doi: 10.1093/nar/gkv350. Epub 2015 Apr 20.

10.

GWAS Central: a comprehensive resource for the comparison and interrogation of genome-wide association studies.

Beck T, Hastings RK, Gollapudi S, Free RC, Brookes AJ.

Eur J Hum Genet. 2014 Jul;22(7):949-52. doi: 10.1038/ejhg.2013.274. Epub 2013 Dec 4.

11.

ciliaFA: a research tool for automated, high-throughput measurement of ciliary beat frequency using freely available software.

Smith CM, Djakow J, Free RC, Djakow P, Lonnen R, Williams G, Pohunek P, Hirst RA, Easton AJ, Andrew PW, O'Callaghan C.

Cilia. 2012 Aug 1;1:14. doi: 10.1186/2046-2530-1-14. eCollection 2012.

12.

Semantically enabling a genome-wide association study database.

Beck T, Free RC, Thorisson GA, Brookes AJ.

J Biomed Semantics. 2012 Dec 17;3(1):9. doi: 10.1186/2041-1480-3-9.

13.

Single-step QuantiFERON screening of adult contacts: a prospective cohort study of tuberculosis risk.

Haldar P, Thuraisingam H, Patel H, Pereira N, Free RC, Entwisle J, Wiselka M, Hoskyns EW, Monk P, Barer MR, Woltmann G.

Thorax. 2013 Mar;68(3):240-6. doi: 10.1136/thoraxjnl-2011-200956. Epub 2012 Sep 6.

PMID:
22956558
14.

DNA analysis of outdoor air reveals a high degree of fungal diversity, temporal variability, and genera not seen by spore morphology.

Pashley CH, Fairs A, Free RC, Wardlaw AJ.

Fungal Biol. 2012 Feb;116(2):214-24. doi: 10.1016/j.funbio.2011.11.004. Epub 2011 Nov 20.

PMID:
22289767
15.

A two-tube combined TaqMan/SYBR Green assay to identify mycobacteria and detect single global lineage-defining polymorphisms in Mycobacterium tuberculosis.

Cheah ES, Malkin J, Free RC, Lee SM, Perera N, Woltmann G, Patel H, Kimmitt PT, Smith RJ, Rajakumar K, Barer MR.

J Mol Diagn. 2010 Mar;12(2):250-6. doi: 10.2353/jmoldx.2010.090030. Epub 2010 Jan 21.

16.

HGVbaseG2P: a central genetic association database.

Thorisson GA, Lancaster O, Free RC, Hastings RK, Sarmah P, Dash D, Brahmachari SK, Brookes AJ.

Nucleic Acids Res. 2009 Jan;37(Database issue):D797-802. doi: 10.1093/nar/gkn748. Epub 2008 Oct 23.

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