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Items: 1 to 50 of 109

1.

Presence and concentrations of select bacterial vaginosis-associated bacteria are associated with increased risk of pelvic inflammatory disease.

Haggerty CL, Ness RB, Totten PA, Farooq F, Tang G, Ko D, Hou X, Fiedler TL, Srinivasan S, Astete SG, Fredricks DN.

Sex Transm Dis. 2020 Mar 5. doi: 10.1097/OLQ.0000000000001164. [Epub ahead of print]

PMID:
32149953
2.

Changes in key vaginal bacteria among postpartum African women initiating intramuscular depot-medroxyprogesterone acetate.

Whitney BM, Guthrie BL, Srinivasan S, Tapia K, Muriuki EM, Chohan BH, Wallis JM, Liu C, McClelland RS, Fredricks DN, Roxby AC.

PLoS One. 2020 Mar 5;15(3):e0229586. doi: 10.1371/journal.pone.0229586. eCollection 2020.

3.

Impact of preconception vaginal microbiota on women's risk of spontaneous preterm birth: protocol for a prospective case-cohort study.

Lokken EM, Mandaliya K, Srinivasan S, Richardson BA, Kinuthia J, Lannon S, Jaoko W, Alumera H, Kemoli A, Fay E, John-Stewart G, Fredricks DN, McClelland RS.

BMJ Open. 2020 Feb 25;10(2):e035186. doi: 10.1136/bmjopen-2019-035186.

4.

Mechanisms of endogenous HIV-1 reactivation by endocervical epithelial cells.

Gornalusse GG, Valdez R, Fenkart G, Vojtech L, Fleming L, Pandey U, Hughes S, Levy C, Dela Cruz EJ, Calienes F, Kirby AC, Fialkow MF, Lentz GM, Wagoner J, Jing L, Koelle DM, Polyak SJ, Fredricks DN, McElrath MJ, Wald A, Hladik F.

J Virol. 2020 Feb 12. pii: JVI.01904-19. doi: 10.1128/JVI.01904-19. [Epub ahead of print]

PMID:
32051273
5.

Vaginal Microbiota and Mucosal Immune Markers in Women With Vulvovaginal Discomfort.

Mitchell CM, Watson L, Mitchell AJ, Hyrien O, Bergerat A, Valint DJ, Pascale A, Hoffman N, Srinivasan S, Fredricks DN.

Sex Transm Dis. 2020 Apr;47(4):269-274. doi: 10.1097/OLQ.0000000000001143.

PMID:
32044865
6.

Human gut microbiota is associated with HIV-reactive immunoglobulin at baseline and following HIV vaccination.

Cram JA, Fiore-Gartland AJ, Srinivasan S, Karuna S, Pantaleo G, Tomaras GD, Fredricks DN, Kublin JG.

PLoS One. 2019 Dec 23;14(12):e0225622. doi: 10.1371/journal.pone.0225622. eCollection 2019.

7.

Stability of Chlamydia trachomatis RNA after long-term biobank storage.

Rose OM, Fredricks DN, Soge OO, Farooq F, Tang G, Ness R, Haggerty CL.

Sex Transm Infect. 2019 Nov;95(7):551. doi: 10.1136/sextrans-2019-054141. No abstract available.

PMID:
31628264
8.

Butyrogenic bacteria after acute graft-versus-host disease (GVHD) are associated with the development of steroid-refractory GVHD.

Golob JL, DeMeules MM, Loeffelholz T, Quinn ZZ, Dame MK, Silvestri SS, Wu MC, Schmidt TM, Fiedler TL, Hoostal MJ, Mielcarek M, Spence J, Pergam SA, Fredricks DN.

Blood Adv. 2019 Oct 8;3(19):2866-2869. doi: 10.1182/bloodadvances.2019000362. No abstract available.

9.

Optimizing bacterial DNA extraction in urine.

Munch MM, Chambers LC, Manhart LE, Domogala D, Lopez A, Fredricks DN, Srinivasan S.

PLoS One. 2019 Sep 24;14(9):e0222962. doi: 10.1371/journal.pone.0222962. eCollection 2019.

10.

Resolution of Symptoms and Resumption of Sex After Diagnosis of Nongonococcal Urethritis Among Men Who Have Sex With Men.

Chambers LC, Hughes JP, Glick SN, Morgan JL, Lowens MS, Robinson TS, Romano SS, Leipertz GL, Jensen JS, Khosropour CM, Fredricks DN, Golden MR, Manhart LE.

Sex Transm Dis. 2019 Oct;46(10):676-682. doi: 10.1097/OLQ.0000000000001040.

11.

Tenofovir disoproxil fumarate intravaginal ring for HIV pre-exposure prophylaxis in sexually active women: a phase 1, single-blind, randomised, controlled trial.

Keller MJ, Wood L, Billingsley JM, Ray LL, Goymer J, Sinclair S, McGinn AP, Marzinke MA, Frank B, Srinivasan S, Liu C, Atrio JM, Espinoza L, Mugo N, Spiegel HML, Anderson PL, Fredricks DN, Hendrix CW, Marrazzo J, Bosinger SE, Herold BC.

Lancet HIV. 2019 Aug;6(8):e498-e508. doi: 10.1016/S2352-3018(19)30145-6. Epub 2019 Jul 15.

PMID:
31320290
12.

Specific Vaginal Bacteria Are Associated With an Increased Risk of Trichomonas vaginalis Acquisition in Women.

Jarrett OD, Srinivasan S, Richardson BA, Fiedler T, Wallis JM, Kinuthia J, Jaoko W, Mandaliya K, Fredricks DN, McClelland RS.

J Infect Dis. 2019 Sep 26;220(9):1503-1510. doi: 10.1093/infdis/jiz354.

PMID:
31287879
13.

Associations between vaginal bacteria implicated in HIV acquisition risk and proinflammatory cytokines and chemokines.

Sabo MC, Lehman DA, Wang B, Richardson BA, Srinivasan S, Osborn L, Matemo D, Kinuthia J, Fiedler TL, Munch MM, Drake AL, Fredricks DN, Overbaugh J, John-Stewart G, McClelland RS, Graham SM.

Sex Transm Infect. 2020 Feb;96(1):3-9. doi: 10.1136/sextrans-2018-053949. Epub 2019 Jun 13.

PMID:
31197065
14.

The gut microbiota and graft-versus-host disease.

Fredricks DN.

J Clin Invest. 2019 May 1;129(5):1808-1817. doi: 10.1172/JCI125797. Epub 2019 May 1. Review.

15.

Association between vaginal washing and detection of Lactobacillus by culture and quantitative PCR in HIV-seronegative Kenyan women: a cross-sectional analysis.

Lokken EM, Manguro GO, Abdallah A, Ngacha C, Shafi J, Kiarie J, Jaoko W, Srinivasan S, Fiedler TL, Munch MM, Fredricks DN, McClelland RS, Balkus JE.

Sex Transm Infect. 2019 Sep;95(6):455-461. doi: 10.1136/sextrans-2018-053769. Epub 2019 Jan 29.

PMID:
30696752
16.

Association between vaginal washing and vaginal bacterial concentrations.

Sabo MC, Balkus JE, Richardson BA, Srinivasan S, Kimani J, Anzala O, Schwebke J, Feidler TL, Fredricks DN, McClelland RS.

PLoS One. 2019 Jan 24;14(1):e0210825. doi: 10.1371/journal.pone.0210825. eCollection 2019.

17.

The Evolving Facets of Bacterial Vaginosis: Implications for HIV Transmission.

McKinnon LR, Achilles SL, Bradshaw CS, Burgener A, Crucitti T, Fredricks DN, Jaspan HB, Kaul R, Kaushic C, Klatt N, Kwon DS, Marrazzo JM, Masson L, McClelland RS, Ravel J, van de Wijgert JHHM, Vodstrcil LA, Tachedjian G.

AIDS Res Hum Retroviruses. 2019 Mar;35(3):219-228. doi: 10.1089/AID.2018.0304.

18.

Primary Syphilis in the Male Urethra: A Case Report.

Chambers LC, Srinivasan S, Lukehart SA, Ocbamichael N, Morgan JL, Lowens MS, Fredricks DN, Golden MR, Manhart LE.

Clin Infect Dis. 2019 Mar 19;68(7):1231-1234. doi: 10.1093/cid/ciy771.

19.

Cross-sectional study of urethral exposures at last sexual episode associated with non-gonococcal urethritis among STD clinic patients.

Chambers LC, Morgan JL, Lowens MS, Robinson TS, Romano SS, Leipertz GL, Hughes JP, Golden MR, Khosropour CM, Fredricks DN, Manhart LE.

Sex Transm Infect. 2019 May;95(3):212-218. doi: 10.1136/sextrans-2018-053634. Epub 2018 Sep 4.

20.

Antibiotic Exposure Prior to Respiratory Viral Infection Is Associated with Progression to Lower Respiratory Tract Disease in Allogeneic Hematopoietic Cell Transplant Recipients.

Ogimi C, Krantz EM, Golob JL, Waghmare A, Liu C, Leisenring WM, Woodard CR, Marquis S, Kuypers JM, Jerome KR, Pergam SA, Fredricks DN, Sorror ML, Englund JA, Boeckh M.

Biol Blood Marrow Transplant. 2018 Nov;24(11):2293-2301. doi: 10.1016/j.bbmt.2018.05.016. Epub 2018 May 16.

21.

Parallel detection of lactobacillus and bacterial vaginosis-associated bacterial DNA in the chorioamnion and vagina of pregnant women at term.

Lannon SMR, Adams Waldorf KM, Fiedler T, Kapur RP, Agnew K, Rajagopal L, Gravett MG, Fredricks DN.

J Matern Fetal Neonatal Med. 2019 Aug;32(16):2702-2710. doi: 10.1080/14767058.2018.1446208. Epub 2018 Mar 12.

PMID:
29478370
22.

Evaluation of the association between the concentrations of key vaginal bacteria and the increased risk of HIV acquisition in African women from five cohorts: a nested case-control study.

McClelland RS, Lingappa JR, Srinivasan S, Kinuthia J, John-Stewart GC, Jaoko W, Richardson BA, Yuhas K, Fiedler TL, Mandaliya KN, Munch MM, Mugo NR, Cohen CR, Baeten JM, Celum C, Overbaugh J, Fredricks DN.

Lancet Infect Dis. 2018 May;18(5):554-564. doi: 10.1016/S1473-3099(18)30058-6. Epub 2018 Jan 26.

23.

Seasonal clustering of sinopulmonary mucormycosis in patients with hematologic malignancies at a large comprehensive cancer center.

Sivagnanam S, Sengupta DJ, Hoogestraat D, Jain R, Stednick Z, Fredricks DN, Hendrie P, Whimbey E, Podczervinski ST, Krantz EM, Duchin JS, Pergam SA.

Antimicrob Resist Infect Control. 2017 Dec 6;6:123. doi: 10.1186/s13756-017-0282-0. eCollection 2017.

24.

Associations between improvement in genitourinary symptoms of menopause and changes in the vaginal ecosystem.

Mitchell CM, Srinivasan S, Plantinga A, Wu MC, Reed SD, Guthrie KA, LaCroix AZ, Fiedler T, Munch M, Liu C, Hoffman NG, Blair IA, Newton K, Freeman EW, Joffe H, Cohen L, Fredricks DN.

Menopause. 2018 May;25(5):500-507. doi: 10.1097/GME.0000000000001037.

25.

Graft-Derived Reconstitution of Mucosal-Associated Invariant T Cells after Allogeneic Hematopoietic Cell Transplantation.

Bhattacharyya A, Hanafi LA, Sheih A, Golob JL, Srinivasan S, Boeckh MJ, Pergam SA, Mahmood S, Baker KK, Gooley TA, Milano F, Fredricks DN, Riddell SR, Turtle CJ.

Biol Blood Marrow Transplant. 2018 Feb;24(2):242-251. doi: 10.1016/j.bbmt.2017.10.003. Epub 2017 Oct 9.

26.

Stool Microbiota at Neutrophil Recovery Is Predictive for Severe Acute Graft vs Host Disease After Hematopoietic Cell Transplantation.

Golob JL, Pergam SA, Srinivasan S, Fiedler TL, Liu C, Garcia K, Mielcarek M, Ko D, Aker S, Marquis S, Loeffelholz T, Plantinga A, Wu MC, Celustka K, Morrison A, Woodfield M, Fredricks DN.

Clin Infect Dis. 2017 Nov 29;65(12):1984-1991. doi: 10.1093/cid/cix699.

27.

Viruses Associated With Unexplained Acute Liver Failure: Next Generation Reveals the Last Generation.

Fredricks DN.

Clin Infect Dis. 2017 Oct 16;65(9):1486-1488. doi: 10.1093/cid/cix597. No abstract available.

PMID:
29020151
28.

Evaluation of Posaconazole Serum Concentrations from Delayed-Release Tablets in Patients at High Risk for Fungal Infections.

Chin A, Pergam SA, Fredricks DN, Hoofnagle AN, Baker KK, Jain R.

Antimicrob Agents Chemother. 2017 Sep 22;61(10). pii: e00569-17. doi: 10.1128/AAC.00569-17. Print 2017 Oct.

29.

Efficacy of oral pre-exposure prophylaxis (PrEP) for HIV among women with abnormal vaginal microbiota: a post-hoc analysis of the randomised, placebo-controlled Partners PrEP Study.

Heffron R, McClelland RS, Balkus JE, Celum C, Cohen CR, Mugo N, Bukusi E, Donnell D, Lingappa J, Kiarie J, Fiedler T, Munch M, Fredricks DN, Baeten JM; Partners PrEP Study Team.

Lancet HIV. 2017 Oct;4(10):e449-e456. doi: 10.1016/S2352-3018(17)30110-8. Epub 2017 Jul 18.

30.

Vaginal microbiota and genitourinary menopausal symptoms: a cross-sectional analysis.

Mitchell CM, Srinivasan S, Zhan X, Wu MC, Reed SD, Guthrie KA, LaCroix AZ, Fiedler T, Munch M, Liu C, Hoffman NG, Blair IA, Newton K, Freeman EW, Joffe H, Cohen L, Fredricks DN.

Menopause. 2017 Oct;24(10):1160-1166. doi: 10.1097/GME.0000000000000904.

31.

Evaluating the accuracy of amplicon-based microbiome computational pipelines on simulated human gut microbial communities.

Golob JL, Margolis E, Hoffman NG, Fredricks DN.

BMC Bioinformatics. 2017 May 30;18(1):283. doi: 10.1186/s12859-017-1690-0.

32.

Disseminated coccidioidomycosis presenting with intramedullary spinal cord abscesses: Management challenges.

Bajema KL, Dalesandro MF, Fredricks DN, Ramchandani M.

Med Mycol Case Rep. 2016 Dec 2;15:1-4. doi: 10.1016/j.mmcr.2016.12.001. eCollection 2017 Mar.

33.

Impact of Periodic Presumptive Treatment for Bacterial Vaginosis on the Vaginal Microbiome among Women Participating in the Preventing Vaginal Infections Trial.

Balkus JE, Srinivasan S, Anzala O, Kimani J, Andac C, Schwebke J, Fredricks DN, McClelland RS.

J Infect Dis. 2017 Mar 1;215(5):723-731. doi: 10.1093/infdis/jiw622.

34.

Semen Bacterial Concentrations and HIV-1 RNA Shedding Among HIV-1-Seropositive Kenyan Men.

Korhonen CJ, Srinivasan S, Huang D, Ko DL, Sanders EJ, Peshu NM, Krieger JN, Muller CH, Coombs RW, Fredricks DN, Graham SM.

J Acquir Immune Defic Syndr. 2017 Mar 1;74(3):250-257. doi: 10.1097/QAI.0000000000001244.

35.

More Easily Cultivated Than Identified: Classical Isolation With Molecular Identification of Vaginal Bacteria.

Srinivasan S, Munch MM, Sizova MV, Fiedler TL, Kohler CM, Hoffman NG, Liu C, Agnew KJ, Marrazzo JM, Epstein SS, Fredricks DN.

J Infect Dis. 2016 Aug 15;214 Suppl 1:S21-8. doi: 10.1093/infdis/jiw192.

36.

Tropheryma whipplei infection (Whipple's disease) in a patient after liver transplantation.

Vindigni SM, Taylor J, Quilter LA, Hyun TS, Liu C, Rosinski SL, Rakita RM, Fredricks DN, Damman CJ.

Transpl Infect Dis. 2016 Aug;18(4):617-24. doi: 10.1111/tid.12562. Epub 2016 Aug 3.

PMID:
27258480
37.

Metabolic Model-Based Integration of Microbiome Taxonomic and Metabolomic Profiles Elucidates Mechanistic Links between Ecological and Metabolic Variation.

Noecker C, Eng A, Srinivasan S, Theriot CM, Young VB, Jansson JK, Fredricks DN, Borenstein E.

mSystems. 2016 Jan-Feb;1(1). pii: e00013-15. Epub 2016 Jan 19.

38.

Isavuconazole treatment for mucormycosis: a single-arm open-label trial and case-control analysis.

Marty FM, Ostrosky-Zeichner L, Cornely OA, Mullane KM, Perfect JR, Thompson GR 3rd, Alangaden GJ, Brown JM, Fredricks DN, Heinz WJ, Herbrecht R, Klimko N, Klyasova G, Maertens JA, Melinkeri SR, Oren I, Pappas PG, Ráčil Z, Rahav G, Santos R, Schwartz S, Vehreschild JJ, Young JH, Chetchotisakd P, Jaruratanasirikul S, Kanj SS, Engelhardt M, Kaufhold A, Ito M, Lee M, Sasse C, Maher RM, Zeiher B, Vehreschild MJGT; VITAL and FungiScope Mucormycosis Investigators.

Lancet Infect Dis. 2016 Jul;16(7):828-837. doi: 10.1016/S1473-3099(16)00071-2. Epub 2016 Mar 9.

PMID:
26969258
39.

Changes in Vaginal Microbiota and Immune Mediators in HIV-1-Seronegative Kenyan Women Initiating Depot Medroxyprogesterone Acetate.

Roxby AC, Fredricks DN, Odem-Davis K, Ásbjörnsdóttir K, Masese L, Fiedler TL, De Rosa S, Jaoko W, Kiarie JN, Overbaugh J, McClelland RS.

J Acquir Immune Defic Syndr. 2016 Apr 1;71(4):359-66. doi: 10.1097/QAI.0000000000000866.

40.

A phase 1 randomized placebo-controlled safety and pharmacokinetic trial of a tenofovir disoproxil fumarate vaginal ring.

Keller MJ, Mesquita PM, Marzinke MA, Teller R, Espinoza L, Atrio JM, Lo Y, Frank B, Srinivasan S, Fredricks DN, Rabe L, Anderson PL, Hendrix CW, Kiser PF, Herold BC.

AIDS. 2016 Mar 13;30(5):743-51. doi: 10.1097/QAD.0000000000000979.

41.

Relationship of Specific Bacteria in the Cervical and Vaginal Microbiotas With Cervicitis.

Gorgos LM, Sycuro LK, Srinivasan S, Fiedler TL, Morgan MT, Balkus JE, McClelland RS, Fredricks DN, Marrazzo JM.

Sex Transm Dis. 2015 Sep;42(9):475-481. doi: 10.1097/OLQ.0000000000000318.

42.

First Trimester Levels of BV-Associated Bacteria and Risk of Miscarriage Among Women Early in Pregnancy.

Nelson DB, Hanlon AL, Wu G, Liu C, Fredricks DN.

Matern Child Health J. 2015 Dec;19(12):2682-7. doi: 10.1007/s10995-015-1790-2.

PMID:
26156825
43.

Correlation between Circulating Fungal Biomarkers and Clinical Outcome in Invasive Aspergillosis.

Neofytos D, Railkar R, Mullane KM, Fredricks DN, Granwehr B, Marr KA, Almyroudis NG, Kontoyiannis DP, Maertens J, Fox R, Douglas C, Iannone R, Kauh E, Shire N.

PLoS One. 2015 Jun 24;10(6):e0129022. doi: 10.1371/journal.pone.0129022. eCollection 2015.

44.

Idiopathic pneumonia syndrome after hematopoietic cell transplantation: evidence of occult infectious etiologies.

Seo S, Renaud C, Kuypers JM, Chiu CY, Huang ML, Samayoa E, Xie H, Yu G, Fisher CE, Gooley TA, Miller S, Hackman RC, Myerson D, Sedlak RH, Kim YJ, Fukuda T, Fredricks DN, Madtes DK, Jerome KR, Boeckh M.

Blood. 2015 Jun 11;125(24):3789-97. doi: 10.1182/blood-2014-12-617035. Epub 2015 Apr 27.

45.

Metabolic signatures of bacterial vaginosis.

Srinivasan S, Morgan MT, Fiedler TL, Djukovic D, Hoffman NG, Raftery D, Marrazzo JM, Fredricks DN.

mBio. 2015 Apr 14;6(2). pii: e00204-15. doi: 10.1128/mBio.00204-15.

46.

Rapid and Profound Shifts in the Vaginal Microbiota Following Antibiotic Treatment for Bacterial Vaginosis.

Mayer BT, Srinivasan S, Fiedler TL, Marrazzo JM, Fredricks DN, Schiffer JT.

J Infect Dis. 2015 Sep 1;212(5):793-802. doi: 10.1093/infdis/jiv079. Epub 2015 Feb 12.

47.

Colonization of the upper genital tract by vaginal bacterial species in nonpregnant women.

Mitchell CM, Haick A, Nkwopara E, Garcia R, Rendi M, Agnew K, Fredricks DN, Eschenbach D.

Am J Obstet Gynecol. 2015 May;212(5):611.e1-9. doi: 10.1016/j.ajog.2014.11.043. Epub 2014 Dec 16.

48.

Mageeibacillus indolicus gen. nov., sp. nov.: a novel bacterium isolated from the female genital tract.

Austin MN, Rabe LK, Srinivasan S, Fredricks DN, Wiesenfeld HC, Hillier SL.

Anaerobe. 2015 Apr;32:37-42. doi: 10.1016/j.anaerobe.2014.12.003. Epub 2014 Dec 4.

49.

Early pregnancy changes in bacterial vaginosis-associated bacteria and preterm delivery.

Nelson DB, Hanlon A, Nachamkin I, Haggerty C, Mastrogiannis DS, Liu C, Fredricks DN.

Paediatr Perinat Epidemiol. 2014 Mar;28(2):88-96. doi: 10.1111/ppe.12106. Epub 2014 Jan 9.

50.

More than meets the eye: associations of vaginal bacteria with gram stain morphotypes using molecular phylogenetic analysis.

Srinivasan S, Morgan MT, Liu C, Matsen FA, Hoffman NG, Fiedler TL, Agnew KJ, Marrazzo JM, Fredricks DN.

PLoS One. 2013 Oct 24;8(10):e78633. doi: 10.1371/journal.pone.0078633. eCollection 2013.

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