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Items: 1 to 50 of 87

1.

Detection of Hepatitis A Virus and Other Enteric Viruses in Shellfish Collected in the Gulf of Naples, Italy.

Fusco G, Anastasio A, Kingsley DH, Amoroso MG, Pepe T, Fratamico PM, Cioffi B, Rossi R, La Rosa G, Boccia F.

Int J Environ Res Public Health. 2019 Jul 19;16(14). pii: E2588. doi: 10.3390/ijerph16142588.

2.

Draft Whole-Genome Sequences of Seven Listeria monocytogenes Strains with Variations in Virulence and Stress Responses.

Liu Y, Xu A, Fratamico PM, Sommers CH, Rotundo L, Boccia F, Jiang Y, Ward TJ.

Microbiol Resour Announc. 2018 Oct 4;7(13). pii: e01038-18. doi: 10.1128/MRA.01038-18. eCollection 2018 Oct.

3.

Draft Genome Sequences of Seven Strains of Shiga Toxin-Producing Escherichia coli O111 with Variation in Their Sensitivity to Novobiocin.

Rotundo L, Boccia F, Fratamico PM, Xu A, Sommers CH, Liu Y, Bono JL, Pepe T.

Microbiol Resour Announc. 2018 Sep 13;7(10). pii: e01030-18. doi: 10.1128/MRA.01030-18. eCollection 2018 Sep.

4.

Interlaboratory Evaluation of the U.S. Food and Drug Administration Escherichia coli Identification Microarray for Profiling Shiga Toxin-Producing Escherichia coli.

Patel IR, Gangiredla J, Lacher DW, Mammel MK, Bagi L, Baranzoni GM, Fratamico PM, Roberts EL, DebROY C, Lindsey RL, V Stoneburg D, Martin H, Smith P, Strockbine NA, Elkins CA, Scheutz F, Feng PCH.

J Food Prot. 2018 Aug;81(8):1275-1282. doi: 10.4315/0362-028X.JFP-18-052.

5.

Molecular serogrouping of Escherichia coli.

DebRoy C, Fratamico PM, Roberts E.

Anim Health Res Rev. 2018 Feb 22:1-16. doi: 10.1017/S1466252317000093. [Epub ahead of print]

PMID:
29467055
6.

Genome Sequences of 34 Shiga Toxin-Producing Escherichia coli Isolates from Swine and Other Sources.

Baranzoni GM, Fratamico PM, Kim GH, Reichenberger ER, Funk JA, Manning SD, Bosilevac JM.

Genome Announc. 2017 Nov 2;5(44). pii: e01214-17. doi: 10.1128/genomeA.01214-17.

7.

Prevalence and characteristics of Shiga toxin-producing Escherichia coli in finishing pigs: Implications on public health.

Cha W, Fratamico PM, Ruth LE, Bowman AS, Nolting JM, Manning SD, Funk JA.

Int J Food Microbiol. 2018 Jan 2;264:8-15. doi: 10.1016/j.ijfoodmicro.2017.10.017. Epub 2017 Oct 21.

PMID:
29080423
8.

Escherichia coli O157:H7 Acid Sensitivity Correlates with Flocculation Phenotype during Nutrient Limitation.

Kay KL, Breidt F, Fratamico PM, Baranzoni GM, Kim GH, Grunden AM, Oh DH.

Front Microbiol. 2017 Jul 26;8:1404. doi: 10.3389/fmicb.2017.01404. eCollection 2017.

9.
10.

Editorial: Emerging Approaches for Typing, Detection, Characterization, and Traceback of Escherichia coli.

Fratamico PM, DebRoy C, Needleman DS.

Front Microbiol. 2016 Dec 27;7:2089. doi: 10.3389/fmicb.2016.02089. eCollection 2016. No abstract available.

11.
12.

Disinfectant and Antimicrobial Susceptibility Profiles of the Big Six Non-O157 Shiga Toxin-Producing Escherichia coli Strains from Food Animals and Humans.

Beier RC, Franz E, Bono JL, Mandrell RE, Fratamico PM, Callaway TR, Andrews K, Poole TL, Crippen TL, Sheffield CL, Anderson RC, Nisbet DJ.

J Food Prot. 2016 Aug;79(8):1355-70. doi: 10.4315/0362-028X.JFP-15-600.

PMID:
27497123
13.

Complete Genome Sequences of Escherichia coli O157:H7 Strains SRCC 1675 and 28RC, Which Vary in Acid Resistance.

Baranzoni GM, Fratamico PM, Reichenberger ER, Kim GH, Breidt F, Kay K, Oh DH.

Genome Announc. 2016 Jul 28;4(4). pii: e00743-16. doi: 10.1128/genomeA.00743-16.

14.

Advances in Molecular Serotyping and Subtyping of Escherichia coli.

Fratamico PM, DebRoy C, Liu Y, Needleman DS, Baranzoni GM, Feng P.

Front Microbiol. 2016 May 3;7:644. doi: 10.3389/fmicb.2016.00644. eCollection 2016. Review.

15.

Characterization of Shiga Toxin Subtypes and Virulence Genes in Porcine Shiga Toxin-Producing Escherichia coli.

Baranzoni GM, Fratamico PM, Gangiredla J, Patel I, Bagi LK, Delannoy S, Fach P, Boccia F, Anastasio A, Pepe T.

Front Microbiol. 2016 Apr 21;7:574. doi: 10.3389/fmicb.2016.00574. eCollection 2016.

16.

Correction: Comparison of O-Antigen Gene Clusters of All O-Serogroups of Escherichia coli and Proposal for Adopting a New Nomenclature for O-Typing.

DebRoy C, Fratamico PM, Yan X, Baranzoni G, Liu Y, Needleman DS, Tebbs R, O'Connell CD, Allred A, Swimley M, Mwangi M, Kapur V, Garay JA, Roberts EL, Katani R.

PLoS One. 2016 Apr 27;11(4):e0154551. doi: 10.1371/journal.pone.0154551. eCollection 2016.

17.

Genome-Scale Screening and Validation of Targets for Identification of Salmonella enterica and Serovar Prediction.

Zhou X, Zhang L, Shi C, Fratamico PM, Liu B, Paoli GC, Dan X, Zhuang X, Cui Y, Wang D, Shi X.

J Food Prot. 2016 Mar;79(3):376-83. doi: 10.4315/0362-028X.JFP-15-286.

PMID:
26939647
18.

Comparison of O-Antigen Gene Clusters of All O-Serogroups of Escherichia coli and Proposal for Adopting a New Nomenclature for O-Typing.

DebRoy C, Fratamico PM, Yan X, Baranzoni G, Liu Y, Needleman DS, Tebbs R, O'Connell CD, Allred A, Swimley M, Mwangi M, Kapur V, Raygoza Garay JA, Roberts EL, Katani R.

PLoS One. 2016 Jan 29;11(1):e0147434. doi: 10.1371/journal.pone.0147434. eCollection 2016. Erratum in: PLoS One. 2016;11(4):e0154551.

19.

Whole genome sequencing of diverse Shiga toxin-producing and non-producing Escherichia coli strains reveals a variety of virulence and novel antibiotic resistance plasmids.

Losada L, DebRoy C, Radune D, Kim M, Sanka R, Brinkac L, Kariyawasam S, Shelton D, Fratamico PM, Kapur V, Feng PC.

Plasmid. 2016 Jan;83:8-11. doi: 10.1016/j.plasmid.2015.12.001. Epub 2015 Dec 31.

PMID:
26746359
20.
21.

Comparison of whole genome sequences from human and non-human Escherichia coli O26 strains.

Norman KN, Clawson ML, Strockbine NA, Mandrell RE, Johnson R, Ziebell K, Zhao S, Fratamico PM, Stones R, Allard MW, Bono JL.

Front Cell Infect Microbiol. 2015 Mar 11;5:21. doi: 10.3389/fcimb.2015.00021. eCollection 2015.

22.

Escherichia coli O-Antigen Gene Clusters of Serogroups O62, O68, O131, O140, O142, and O163: DNA Sequences and Similarity between O62 and O68, and PCR-Based Serogrouping.

Liu Y, Yan X, DebRoy C, Fratamico PM, Needleman DS, Li RW, Wang W, Losada L, Brinkac L, Radune D, Toro M, Hegde N, Meng J.

Biosensors (Basel). 2015 Feb 5;5(1):51-68. doi: 10.3390/bios5010051.

23.

Light scattering sensor for direct identification of colonies of Escherichia coli serogroups O26, O45, O103, O111, O121, O145 and O157.

Tang Y, Kim H, Singh AK, Aroonnual A, Bae E, Rajwa B, Fratamico PM, Bhunia AK.

PLoS One. 2014 Aug 19;9(8):e105272. doi: 10.1371/journal.pone.0105272. eCollection 2014.

24.

Diverse virulence gene content of Shiga toxin-producing Escherichia coli from finishing swine.

Tseng M, Fratamico PM, Bagi L, Delannoy S, Fach P, Manning SD, Funk JA.

Appl Environ Microbiol. 2014 Oct;80(20):6395-402. doi: 10.1128/AEM.01761-14. Epub 2014 Aug 8.

25.

Detection of Shiga toxin-producing Escherichia coli (STEC) O157:H7, O26, O45, O103, O111, O121, and O145, and Salmonella in retail raw ground beef using the DuPont™ BAX® system.

Wasilenko JL, Fratamico PM, Sommers C, DeMarco DR, Varkey S, Rhoden K, Tice G.

Front Cell Infect Microbiol. 2014 Jun 18;4:81. doi: 10.3389/fcimb.2014.00081. eCollection 2014.

26.

Shiga toxin-producing E. coli (STEC) in swine: prevalence over the finishing period and characteristics of the STEC isolates.

Tseng M, Fratamico PM, Bagi L, Manzinger D, Funk JA.

Epidemiol Infect. 2015 Feb;143(3):505-14. doi: 10.1017/S0950268814001095. Epub 2014 May 8.

PMID:
24810787
27.

Evaluation of a multiplex real-time PCR method for detecting shiga toxin-producing Escherichia coli in beef and comparison to the U.S. Department of Agriculture Food Safety and Inspection Service Microbiology laboratory guidebook method.

Fratamico PM, Wasilenko JL, Garman B, Demarco DR, Varkey S, Jensen M, Rhoden K, Tice G.

J Food Prot. 2014 Feb;77(2):180-8. doi: 10.4315/0362-028X.JFP-13-248.

PMID:
24490911
28.

Detection and isolation of Shiga toxin-producing Escherichia coli (STEC) O104 from sprouts.

Baranzoni GM, Fratamico PM, Rubio F, Glaze T, Bagi LK, Albonetti S.

Int J Food Microbiol. 2014 Mar 3;173:99-104. doi: 10.1016/j.ijfoodmicro.2013.12.020. Epub 2013 Dec 29.

PMID:
24413585
29.

Shiga toxin-producing Escherichia coli in swine: the public health perspective.

Tseng M, Fratamico PM, Manning SD, Funk JA.

Anim Health Res Rev. 2014 Jun;15(1):63-75. doi: 10.1017/S1466252313000170. Epub 2014 Jan 8. Review.

30.

Shiga toxin-producing Escherichia coli.

Smith JL, Fratamico PM, Gunther NW 4th.

Adv Appl Microbiol. 2014;86:145-97. doi: 10.1016/B978-0-12-800262-9.00003-2. Review.

PMID:
24377855
31.

Characterization and comparative analysis of a second thermonuclease from Staphylococcus aureus.

Hu Y, Meng J, Shi C, Hervin K, Fratamico PM, Shi X.

Microbiol Res. 2013 Mar 30;168(3):174-82. doi: 10.1016/j.micres.2012.09.003. Epub 2013 Jan 5.

32.

Detection of Shiga toxin-producing Escherichia coli in ground beef using the GeneDisc real-time PCR system.

Fratamico PM, Bagi LK.

Front Cell Infect Microbiol. 2012 Dec 20;2:152. doi: 10.3389/fcimb.2012.00152. eCollection 2012.

33.

Effect of stress on non-O157 Shiga toxin-producing Escherichia coli.

Smith JL, Fratamico PM.

J Food Prot. 2012 Dec;75(12):2241-50. doi: 10.4315/0362-028X.JFP-12-255. Review.

PMID:
23212025
34.
35.

Application of ozonated dry ice (ALIGAL™ Blue Ice) for packaging and transport in the food industry.

Fratamico PM, Juneja V, Annous BA, Rasanayagam V, Sundar M, Braithwaite D, Fisher S.

J Food Sci. 2012 May;77(5):M285-91. doi: 10.1111/j.1750-3841.2012.02682.x.

PMID:
23163945
36.

Influence of primer sequences and DNA extraction method on detection of non-O157 Shiga toxin-producing Escherichia coli in ground beef by real-time PCR targeting the eae, stx, and serogroup-specific genes.

Wasilenko JL, Fratamico PM, Narang N, Tillman GE, Ladely S, Simmons M, Cray WC Jr.

J Food Prot. 2012 Nov;75(11):1939-50. doi: 10.4315/0362-028X.JFP-12-087.

PMID:
23127702
37.

Latex agglutination assays for detection of non-O157 Shiga toxin-producing Escherichia coli serogroups O26, O45, O103, O111, O121, and O145.

Medina MB, Shelver WL, Fratamico PM, Fortis L, Tillman G, Narang N, Cray WC Jr, Esteban E, Debroy A.

J Food Prot. 2012 May;75(5):819-26. doi: 10.4315/0362-028X.JFP-11-430.

PMID:
22564929
38.

DNA sequence and analysis of a 90.1-kb plasmid in Shiga toxin-producing Escherichia coli (STEC) O145:NM 83-75.

Yan X, Fratamico PM, Needleman DS, Bayles DO.

Plasmid. 2012 Jul;68(1):25-32. doi: 10.1016/j.plasmid.2012.02.001. Epub 2012 Feb 19.

PMID:
22370037
39.

Detection of O antigens in Escherichia coli.

DebRoy C, Roberts E, Fratamico PM.

Anim Health Res Rev. 2011 Dec;12(2):169-85. doi: 10.1017/S1466252311000193. Review.

PMID:
22152292
40.

Prevalence, distribution, and molecular characterization of Salmonella recovered from swine finishing herds and a slaughter facility in Santa Catarina, Brazil.

Kich JD, Coldebella A, Morés N, Nogueira MG, Cardoso M, Fratamico PM, Call JE, Fedorka-Cray P, Luchansky JB.

Int J Food Microbiol. 2011 Dec 15;151(3):307-13. doi: 10.1016/j.ijfoodmicro.2011.09.024. Epub 2011 Oct 1.

PMID:
22024043
41.

Evaluation of TA10 broth for recovery of heat- and freeze-injured Salmonella from beef.

Kamisaki-Horikoshi N, Okada Y, Takeshita K, Sameshima T, Kawasaki S, Kawamoto S, Fratamico PM.

J AOAC Int. 2011 May-Jun;94(3):857-62.

PMID:
21797014
42.

Differential gene expression of E. coli O157:H7 in ground beef extract compared to tryptic soy broth.

Fratamico PM, Wang S, Yan X, Zhang W, Li Y.

J Food Sci. 2011 Jan-Feb;76(1):M79-87. doi: 10.1111/j.1750-3841.2010.01952.x. Epub 2011 Jan 6.

PMID:
21535697
43.

From ontology selection and semantic web to an integrated information system for food-borne diseases and food safety.

Yan X, Peng Y, Meng J, Ruzante J, Fratamico PM, Huang L, Juneja V, Needleman DS.

Adv Exp Med Biol. 2011;696:741-50. doi: 10.1007/978-1-4419-7046-6_76.

PMID:
21431616
44.

Detection by multiplex real-time polymerase chain reaction assays and isolation of Shiga toxin-producing Escherichia coli serogroups O26, O45, O103, O111, O121, and O145 in ground beef.

Fratamico PM, Bagi LK, Cray WC Jr, Narang N, Yan X, Medina M, Liu Y.

Foodborne Pathog Dis. 2011 May;8(5):601-7. doi: 10.1089/fpd.2010.0773. Epub 2011 Jan 9. Erratum in: Foodborne Pathog Dis. 2012 Apr;9(4):373.

PMID:
21214490
45.

The complete DNA sequence and analysis of the virulence plasmid and of five additional plasmids carried by Shiga toxin-producing Escherichia coli O26:H11 strain H30.

Fratamico PM, Yan X, Caprioli A, Esposito G, Needleman DS, Pepe T, Tozzoli R, Cortesi ML, Morabito S.

Int J Med Microbiol. 2011 Mar;301(3):192-203. doi: 10.1016/j.ijmm.2010.09.002. Epub 2011 Jan 5.

PMID:
21212019
46.

Eavesdropping by bacteria: the role of SdiA in Escherichia coli and Salmonella enterica serovar Typhimurium quorum sensing.

Smith JL, Fratamico PM, Yan X.

Foodborne Pathog Dis. 2011 Feb;8(2):169-78. doi: 10.1089/fpd.2010.0651. Epub 2010 Oct 30. Review.

PMID:
21034261
47.

Fluoroquinolone resistance in campylobacter.

Smith JL, Fratamico PM.

J Food Prot. 2010 Jun;73(6):1141-52. Review.

PMID:
20537275
48.

Escherichia coli serogroup O2 and O28ac O-antigen gene cluster sequences and detection of pathogenic E. coli O2 and O28ac by PCR.

Fratamico PM, Yan X, Liu Y, DebRoy C, Byrne B, Monaghan A, Fanning S, Bolton D.

Can J Microbiol. 2010 Apr;56(4):308-16. doi: 10.1139/w10-010.

PMID:
20453897
49.

Multiplex real-time polymerase chain reaction assay for simultaneous detection and quantification of Salmonella species, Listeria monocytogenes, and Escherichia coli O157:H7 in ground pork samples.

Kawasaki S, Fratamico PM, Horikoshi N, Okada Y, Takeshita K, Sameshima T, Kawamoto S.

Foodborne Pathog Dis. 2010 May;7(5):549-54. doi: 10.1089/fpd.2009.0465.

PMID:
20132032
50.

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