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Calcium Regulation of Bacterial Virulence.

King MM, Kayastha BB, Franklin MJ, Patrauchan MA.

Adv Exp Med Biol. 2020;1131:827-855. doi: 10.1007/978-3-030-12457-1_33. Review.


DropSOAC: Stabilizing Microfluidic Drops for Time-Lapse Quantification of Single-Cell Bacterial Physiology.

Pratt SL, Zath GK, Akiyama T, Williamson KS, Franklin MJ, Chang CB.

Front Microbiol. 2019 Sep 24;10:2112. doi: 10.3389/fmicb.2019.02112. eCollection 2019.


Mapping out bare-nosed wombat (Vombatus ursinus) burrows with the use of a drone.

Old JM, Lin SH, Franklin MJM.

BMC Ecol. 2019 Sep 18;19(1):39. doi: 10.1186/s12898-019-0257-5.


Conceptual Model of Biofilm Antibiotic Tolerance That Integrates Phenomena of Diffusion, Metabolism, Gene Expression, and Physiology.

Stewart PS, White B, Boegli L, Hamerly T, Williamson KS, Franklin MJ, Bothner B, James GA, Fisher S, Vital-Lopez FG, Wallqvist A.

J Bacteriol. 2019 Oct 21;201(22). pii: e00307-19. doi: 10.1128/JB.00307-19. Print 2019 Nov 15.


Metagenomic Profiling of Microbial Pathogens in the Little Bighorn River, Montana.

Hamner S, Brown BL, Hasan NA, Franklin MJ, Doyle J, Eggers MJ, Colwell RR, Ford TE.

Int J Environ Res Public Health. 2019 Mar 27;16(7). pii: E1097. doi: 10.3390/ijerph16071097.


Expression and regulation of the Pseudomonas aeruginosa hibernation promoting factor.

Akiyama T, Williamson KS, Franklin MJ.

Mol Microbiol. 2018 Oct;110(2):161-175. doi: 10.1111/mmi.14001. Epub 2018 Oct 15.


Development of a core outcome set for clinical trials in facial aging: study protocol for a systematic review of the literature and identification of a core outcome set using a Delphi survey.

Schlessinger DI, Iyengar S, Yanes AF, Henley JK, Ashchyan HJ, Kurta AO, Patel PM, Sheikh UA, Franklin MJ, Hanna CC, Chen BR, Chiren SG, Schmitt J, Deckert S, Furlan KC, Poon E, Maher IA, Cartee TV, Sobanko JF, Alam M.

Trials. 2017 Aug 1;18(1):359. doi: 10.1186/s13063-017-2104-3.


Exophytic Digital Lesion.

Seiverling EV, Franklin MJ, Miller JJ, Chung CG.

Am Fam Physician. 2017 May 15;95(10):667-668. No abstract available.


Resuscitation of Pseudomonas aeruginosa from dormancy requires hibernation promoting factor (PA4463) for ribosome preservation.

Akiyama T, Williamson KS, Schaefer R, Pratt S, Chang CB, Franklin MJ.

Proc Natl Acad Sci U S A. 2017 Mar 21;114(12):3204-3209. doi: 10.1073/pnas.1700695114. Epub 2017 Mar 7.


A somatic piRNA pathway in the Drosophila fat body ensures metabolic homeostasis and normal lifespan.

Jones BC, Wood JG, Chang C, Tam AD, Franklin MJ, Siegel ER, Helfand SL.

Nat Commun. 2016 Dec 21;7:13856. doi: 10.1038/ncomms13856.


Genome Sequence of Janthinobacterium sp. CG23_2, a Violacein-Producing Isolate from an Antarctic Supraglacial Stream.

Smith HJ, Foreman CM, Akiyama T, Franklin MJ, Devitt NP, Ramaraj T.

Genome Announc. 2016 Jan 28;4(1). pii: e01468-15. doi: 10.1128/genomeA.01468-15.


The Pseudomonas aeruginosa PAO1 Two-Component Regulator CarSR Regulates Calcium Homeostasis and Calcium-Induced Virulence Factor Production through Its Regulatory Targets CarO and CarP.

Guragain M, King MM, Williamson KS, Pérez-Osorio AC, Akiyama T, Khanam S, Patrauchan MA, Franklin MJ.

J Bacteriol. 2016 Jan 11;198(6):951-63. doi: 10.1128/JB.00963-15.


Microsensor and transcriptomic signatures of oxygen depletion in biofilms associated with chronic wounds.

James GA, Ge Zhao A, Usui M, Underwood RA, Nguyen H, Beyenal H, deLancey Pulcini E, Agostinho Hunt A, Bernstein HC, Fleckman P, Olerud J, Williamson KS, Franklin MJ, Stewart PS.

Wound Repair Regen. 2016 Mar;24(2):373-83. doi: 10.1111/wrr.12401. Epub 2016 Feb 16.


New Technologies for Studying Biofilms.

Franklin MJ, Chang C, Akiyama T, Bothner B.

Microbiol Spectr. 2015 Aug;3(4). doi: 10.1128/microbiolspec.MB-0016-2014. Review.


Antisense oligonucleotide targeting eukaryotic translation initiation factor 4E reduces growth and enhances chemosensitivity of non-small-cell lung cancer cells.

Thumma SC, Jacobson BA, Patel MR, Konicek BW, Franklin MJ, Jay-Dixon J, Sadiq A, De A, Graff JR, Kratzke RA.

Cancer Gene Ther. 2015 Aug;22(8):396-401. doi: 10.1038/cgt.2015.34. Epub 2015 Jul 31.


Contribution of stress responses to antibiotic tolerance in Pseudomonas aeruginosa biofilms.

Stewart PS, Franklin MJ, Williamson KS, Folsom JP, Boegli L, James GA.

Antimicrob Agents Chemother. 2015 Jul;59(7):3838-47. doi: 10.1128/AAC.00433-15. Epub 2015 Apr 13.


A Pseudomonas aeruginosa EF-hand protein, EfhP (PA4107), modulates stress responses and virulence at high calcium concentration.

Sarkisova SA, Lotlikar SR, Guragain M, Kubat R, Cloud J, Franklin MJ, Patrauchan MA.

PLoS One. 2014 Jun 11;9(2):e98985. doi: 10.1371/journal.pone.0098985. eCollection 2014.


Bile salts affect expression of Escherichia coli O157:H7 genes for virulence and iron acquisition, and promote growth under iron limiting conditions.

Hamner S, McInnerney K, Williamson K, Franklin MJ, Ford TE.

PLoS One. 2013 Sep 10;8(9):e74647. doi: 10.1371/journal.pone.0074647. eCollection 2013.


Role for ferredoxin:NAD(P)H oxidoreductase (FprA) in sulfate assimilation and siderophore biosynthesis in Pseudomonads.

Lewis TA, Glassing A, Harper J, Franklin MJ.

J Bacteriol. 2013 Sep;195(17):3876-87. doi: 10.1128/JB.00528-13. Epub 2013 Jun 21.


Recognizing the research achievements of new investigators.

Franklin MJ.

Transl Res. 2013 Aug;162(2):130-1. doi: 10.1016/j.trsl.2013.05.005. Epub 2013 Jun 12. No abstract available.


Microbial and algal alginate gelation characterized by magnetic resonance.

Fabich HT, Vogt SJ, Sherick ML, Seymour JD, Brown JR, Franklin MJ, Codd SL.

J Biotechnol. 2012 Oct 31;161(3):320-7. doi: 10.1016/j.jbiotec.2012.04.016. Epub 2012 Jun 21.


Heterogeneity in Pseudomonas aeruginosa biofilms includes expression of ribosome hibernation factors in the antibiotic-tolerant subpopulation and hypoxia-induced stress response in the metabolically active population.

Williamson KS, Richards LA, Perez-Osorio AC, Pitts B, McInnerney K, Stewart PS, Franklin MJ.

J Bacteriol. 2012 Apr;194(8):2062-73. doi: 10.1128/JB.00022-12. Epub 2012 Feb 17.


Polymorphisms in DNA repair gene XRCC1 and skin cancer risk: a meta-analysis.

Zhang H, Li W, Franklin MJ, Dudek AZ.

Anticancer Res. 2011 Nov;31(11):3945-52.


Biosynthesis of the Pseudomonas aeruginosa Extracellular Polysaccharides, Alginate, Pel, and Psl.

Franklin MJ, Nivens DE, Weadge JT, Howell PL.

Front Microbiol. 2011 Aug 22;2:167. doi: 10.3389/fmicb.2011.00167. eCollection 2011.


Genotypic and phenotypic variation in Pseudomonas aeruginosa reveals signatures of secondary infection and mutator activity in certain cystic fibrosis patients with chronic lung infections.

Warren AE, Boulianne-Larsen CM, Chandler CB, Chiotti K, Kroll E, Miller SR, Taddei F, Sermet-Gaudelus I, Ferroni A, McInnerney K, Franklin MJ, Rosenzweig F.

Infect Immun. 2011 Dec;79(12):4802-18. doi: 10.1128/IAI.05282-11. Epub 2011 Sep 19.


Metanephric adenoma of the kidney: an unusual diagnostic challenge.

Obulareddy SJ, Xin J, Truskinovsky AM, Anderson JK, Franklin MJ, Dudek AZ.

Rare Tumors. 2010 Jun 30;2(2):e38. doi: 10.4081/rt.2010.e38.


Pericytes and vessel maturation during tumor angiogenesis and metastasis.

Raza A, Franklin MJ, Dudek AZ.

Am J Hematol. 2010 Aug;85(8):593-8. doi: 10.1002/ajh.21745. Review.


Heterogeneous rpoS and rhlR mRNA levels and 16S rRNA/rDNA (rRNA gene) ratios within Pseudomonas aeruginosa biofilms, sampled by laser capture microdissection.

Pérez-Osorio AC, Williamson KS, Franklin MJ.

J Bacteriol. 2010 Jun;192(12):2991-3000. doi: 10.1128/JB.01598-09. Epub 2010 Mar 26.


Sorafenib induces partial response in metastatic medullary thyroid carcinoma.

Spector E, Franklin MJ, Truskinovsky AM, Dudek AZ.

Acta Oncol. 2010;49(1):104-6. doi: 10.3109/02841860903147532. No abstract available.


Photodynamic therapy for Acinetobacter baumannii burn infections in mice.

Dai T, Tegos GP, Lu Z, Huang L, Zhiyentayev T, Franklin MJ, Baer DG, Hamblin MR.

Antimicrob Agents Chemother. 2009 Sep;53(9):3929-34. doi: 10.1128/AAC.00027-09. Epub 2009 Jun 29.


Tolerance of dormant and active cells in Pseudomonas aeruginosa PA01 biofilm to antimicrobial agents.

Kim J, Hahn JS, Franklin MJ, Stewart PS, Yoon J.

J Antimicrob Chemother. 2009 Jan;63(1):129-35. doi: 10.1093/jac/dkn462. Epub 2008 Nov 11.


Using a two-step hydride transfer to achieve 1,4-reduction in the catalytic hydrogenation of an acyl pyridinium cation.

Shaw AP, Ryland BL, Franklin MJ, Norton JR, Chen JY, Hall ML.

J Org Chem. 2008 Dec 19;73(24):9668-74. doi: 10.1021/jo801928t.


Localized gene expression in Pseudomonas aeruginosa biofilms.

Lenz AP, Williamson KS, Pitts B, Stewart PS, Franklin MJ.

Appl Environ Microbiol. 2008 Jul;74(14):4463-71. doi: 10.1128/AEM.00710-08. Epub 2008 May 16.


Physiological heterogeneity in biofilms.

Stewart PS, Franklin MJ.

Nat Rev Microbiol. 2008 Mar;6(3):199-210. doi: 10.1038/nrmicro1838. Review.


qRT-PCR of Microbial Biofilms.

Pérez-Osorio AC, Franklin MJ.

CSH Protoc. 2008 Oct 1;2008:pdb.prot5066. doi: 10.1101/pdb.prot5066.


Isolation of RNA and DNA from biofilm samples obtained by laser capture microdissection microscopy.

Pérez-Osorio AC, Franklin MJ.

CSH Protoc. 2008 Oct 1;2008:pdb.prot5065. doi: 10.1101/pdb.prot5065.


Strain-specific proteome responses of Pseudomonas aeruginosa to biofilm-associated growth and to calcium.

Patrauchan MA, Sarkisova SA, Franklin MJ.

Microbiology. 2007 Nov;153(Pt 11):3838-3851. doi: 10.1099/mic.0.2007/010371-0.


The edible wolf peach.

Hammerschmidt DE, Franklin MJ.

J Lab Clin Med. 2005 Oct;146(4):251-2. No abstract available.


Calcium influences cellular and extracellular product formation during biofilm-associated growth of a marine Pseudoalteromonas sp.

Patrauchan MA, Sarkisova S, Sauer K, Franklin MJ.

Microbiology. 2005 Sep;151(Pt 9):2885-2897. doi: 10.1099/mic.0.28041-0.


Epimerase active domain of Pseudomonas aeruginosa AlgG, a protein that contains a right-handed beta-helix.

Douthit SA, Dlakic M, Ohman DE, Franklin MJ.

J Bacteriol. 2005 Jul;187(13):4573-83.


Calcium-induced virulence factors associated with the extracellular matrix of mucoid Pseudomonas aeruginosa biofilms.

Sarkisova S, Patrauchan MA, Berglund D, Nivens DE, Franklin MJ.

J Bacteriol. 2005 Jul;187(13):4327-37.


Stratified growth in Pseudomonas aeruginosa biofilms.

Werner E, Roe F, Bugnicourt A, Franklin MJ, Heydorn A, Molin S, Pitts B, Stewart PS.

Appl Environ Microbiol. 2004 Oct;70(10):6188-96.


The myelin proteolipid protein gene modulates apoptosis in neural and non-neural tissues.

Skoff RP, Bessert DA, Cerghet M, Franklin MJ, Rout UK, Nave KA, Carlock L, Ghandour MS, Armant DR.

Cell Death Differ. 2004 Dec;11(12):1247-57.


Determination of proton flux and conductance at pH 6.8 through single FO sectors from Escherichia coli.

Franklin MJ, Brusilow WS, Woodbury DJ.

Biophys J. 2004 Nov;87(5):3594-9. Epub 2004 Aug 31.


Compromised host defense on Pseudomonas aeruginosa biofilms: characterization of neutrophil and biofilm interactions.

Jesaitis AJ, Franklin MJ, Berglund D, Sasaki M, Lord CI, Bleazard JB, Duffy JE, Beyenal H, Lewandowski Z.

J Immunol. 2003 Oct 15;171(8):4329-39.


The dual roles of AlgG in C-5-epimerization and secretion of alginate polymers in Pseudomonas aeruginosa.

Jain S, Franklin MJ, Ertesvåg H, Valla S, Ohman DE.

Mol Microbiol. 2003 Feb;47(4):1123-33.


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