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Items: 16

1.

Sequential Phosphopeptide Enrichment for Phosphoproteome Analysis of Filamentous Fungi: A Test Case Using Magnaporthe oryzae.

Oh Y, Franck WL, Dean RA.

Methods Mol Biol. 2018;1848:81-91. doi: 10.1007/978-1-4939-8724-5_7.

2.

DNA Microarray-Based Identification of Genes Regulated by NtrC in Bradyrhizobium japonicum.

Franck WL, Qiu J, Lee HI, Chang WS, Stacey G.

Appl Environ Microbiol. 2015 Aug 15;81(16):5299-308. doi: 10.1128/AEM.00609-15. Epub 2015 May 29.

3.

Phosphoproteome Analysis Links Protein Phosphorylation to Cellular Remodeling and Metabolic Adaptation during Magnaporthe oryzae Appressorium Development.

Franck WL, Gokce E, Randall SM, Oh Y, Eyre A, Muddiman DC, Dean RA.

J Proteome Res. 2015 Jun 5;14(6):2408-24. doi: 10.1021/pr501064q. Epub 2015 May 15.

4.

Soybean ureases, but not that of Bradyrhizobium japonicum, are involved in the process of soybean root nodulation.

Medeiros-Silva M, Franck WL, Borba MP, Pizzato SB, Strodtman KN, Emerich DW, Stacey G, Polacco JC, Carlini CR.

J Agric Food Chem. 2014 Apr 23;62(16):3517-24. doi: 10.1021/jf5000612. Epub 2014 Apr 9.

PMID:
24716625
5.

Temporal analysis of the magnaporthe oryzae proteome during conidial germination and cyclic AMP (cAMP)-mediated appressorium formation.

Franck WL, Gokce E, Oh Y, Muddiman DC, Dean RA.

Mol Cell Proteomics. 2013 Aug;12(8):2249-65. doi: 10.1074/mcp.M112.025874. Epub 2013 May 12.

6.

In-depth analysis of the Magnaporthe oryzae conidial proteome.

Gokce E, Franck WL, Oh Y, Dean RA, Muddiman DC.

J Proteome Res. 2012 Dec 7;11(12):5827-35. doi: 10.1021/pr300604s. Epub 2012 Oct 29.

7.

Polyubiquitin is required for growth, development and pathogenicity in the rice blast fungus Magnaporthe oryzae.

Oh Y, Franck WL, Han SO, Shows A, Gokce E, Muddiman DC, Dean RA.

PLoS One. 2012;7(8):e42868. doi: 10.1371/journal.pone.0042868. Epub 2012 Aug 10.

8.

Evaluation of normalization methods on GeLC-MS/MS label-free spectral counting data to correct for variation during proteomic workflows.

Gokce E, Shuford CM, Franck WL, Dean RA, Muddiman DC.

J Am Soc Mass Spectrom. 2011 Dec;22(12):2199-208. doi: 10.1007/s13361-011-0237-2. Epub 2011 Sep 24.

PMID:
21952779
9.

Bacterial outer membrane channel for divalent metal ion acquisition.

Hohle TH, Franck WL, Stacey G, O'Brian MR.

Proc Natl Acad Sci U S A. 2011 Sep 13;108(37):15390-5. doi: 10.1073/pnas.1110137108. Epub 2011 Aug 31.

10.

Direct comparison of stable isotope labeling by amino acids in cell culture and spectral counting for quantitative proteomics.

Collier TS, Sarkar P, Franck WL, Rao BM, Dean RA, Muddiman DC.

Anal Chem. 2010 Oct 15;82(20):8696-702. doi: 10.1021/ac101978b.

PMID:
20845935
11.

Whole-genome transcriptional profiling of Bradyrhizobium japonicum during chemoautotrophic growth.

Franck WL, Chang WS, Qiu J, Sugawara M, Sadowsky MJ, Smith SA, Stacey G.

J Bacteriol. 2008 Oct;190(20):6697-705. doi: 10.1128/JB.00543-08. Epub 2008 Aug 8.

12.

An oligonucleotide microarray resource for transcriptional profiling of Bradyrhizobium japonicum.

Chang WS, Franck WL, Cytryn E, Jeong S, Joshi T, Emerich DW, Sadowsky MJ, Xu D, Stacey G.

Mol Plant Microbe Interact. 2007 Oct;20(10):1298-307.

13.

Transcriptional and physiological responses of Bradyrhizobium japonicum to desiccation-induced stress.

Cytryn EJ, Sangurdekar DP, Streeter JG, Franck WL, Chang WS, Stacey G, Emerich DW, Joshi T, Xu D, Sadowsky MJ.

J Bacteriol. 2007 Oct;189(19):6751-62. Epub 2007 Jul 27. Erratum in: J Bacteriol. 2007 Dec;186(24):9150.

14.

Legumes symbioses: absence of Nod genes in photosynthetic bradyrhizobia.

Giraud E, Moulin L, Vallenet D, Barbe V, Cytryn E, Avarre JC, Jaubert M, Simon D, Cartieaux F, Prin Y, Bena G, Hannibal L, Fardoux J, Kojadinovic M, Vuillet L, Lajus A, Cruveiller S, Rouy Z, Mangenot S, Segurens B, Dossat C, Franck WL, Chang WS, Saunders E, Bruce D, Richardson P, Normand P, Dreyfus B, Pignol D, Stacey G, Emerich D, Verméglio A, Médigue C, Sadowsky M.

Science. 2007 Jun 1;316(5829):1307-12.

15.

Complex regulation of arsenite oxidation in Agrobacterium tumefaciens.

Kashyap DR, Botero LM, Franck WL, Hassett DJ, McDermott TR.

J Bacteriol. 2006 Feb;188(3):1081-8.

16.

Classification of isolates from locations in Austria and Yellowstone National Park as Geobacillus tepidamans sp. nov.

Schäffer C, Franck WL, Scheberl A, Kosma P, McDermott TR, Messner P.

Int J Syst Evol Microbiol. 2004 Nov;54(Pt 6):2361-8.

PMID:
15545484

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