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Neutrophil extracellular traps in ischemic stroke thrombi. Laridan E et al. Ann Neurol. (2017)

Controlling false discoveries in genome scans for selection. François O et al. Mol Ecol. (2016)

The Empirical Distribution of Singletons for Geographic Samples of DNA Sequences. Cubry P et al. Front Genet. (2017)

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Items: 1 to 50 of 82


Multiple introductions and population structure during the rapid expansion of the invasive Sahara mustard (Brassica tournefortii).

Winkler DE, Chapin KJ, François O, Garmon JD, Gaut BS, Huxman TE.

Ecol Evol. 2019 Jun 28;9(14):7928-7941. doi: 10.1002/ece3.5239. eCollection 2019 Jul.


Corrigendum to 'Measuring the Effects of in vitro Mastication on Bolus Granulometry of Shredded Meat: A Proposal for a New Methodological Procedure' [Food research international, 116 (2019), 1266-1273].

Duconseille A, François O, Pereira B, Lambert C, Peyron MA, Hennequin M.

Food Res Int. 2019 Sep;123:809. doi: 10.1016/j.foodres.2019.05.031. Epub 2019 May 24. No abstract available.


Yam genomics supports West Africa as a major cradle of crop domestication.

Scarcelli N, Cubry P, Akakpo R, Thuillet AC, Obidiegwu J, Baco MN, Otoo E, Sonké B, Dansi A, Djedatin G, Mariac C, Couderc M, Causse S, Alix K, Chaïr H, François O, Vigouroux Y.

Sci Adv. 2019 May 1;5(5):eaaw1947. doi: 10.1126/sciadv.aaw1947. eCollection 2019 May.


Structural analysis of ischemic stroke thrombi: histological indications for therapy resistance.

Staessens S, Denorme F, François O, Desender L, Dewaele T, Vanacker P, Deckmyn H, Vanhoorelbeke K, Andersson T, De Meyer SF.

Haematologica. 2019 May 2. pii: haematol.2019.219881. doi: 10.3324/haematol.2019.219881. [Epub ahead of print]


Managing Missing Data in the Hospital Survey on Patient Safety Culture: A Simulation Study.

Boussat B, François O, Viotti J, Seigneurin A, Giai J, François P, Labarère J.

J Patient Saf. 2019 Mar 22. doi: 10.1097/PTS.0000000000000595. [Epub ahead of print]


Measuring the effects of in vitro mastication on bolus granulometry of shredded meat: A proposal for a new methodological procedure.

Duconseille A, François O, Bruno P, Céline L, Marie-Agnès P, Martine H.

Food Res Int. 2019 Feb;116:1266-1273. doi: 10.1016/j.foodres.2018.10.014. Epub 2018 Oct 4. Erratum in: Food Res Int. 2019 Sep;123:809.


LFMM 2: Fast and Accurate Inference of Gene-Environment Associations in Genome-Wide Studies.

Caye K, Jumentier B, Lepeule J, François O.

Mol Biol Evol. 2019 Apr 1;36(4):852-860. doi: 10.1093/molbev/msz008.


Using high-throughput sequencing for investigating intra-host hepatitis C evolution over long retrospective periods.

Caporossi A, Kulkarni O, Blum M, Leroy V, Morand P, Larrat S, François O.

Infect Genet Evol. 2019 Jan;67:136-144. doi: 10.1016/j.meegid.2018.11.004. Epub 2018 Nov 3.


A western Sahara centre of domestication inferred from pearl millet genomes.

Burgarella C, Cubry P, Kane NA, Varshney RK, Mariac C, Liu X, Shi C, Thudi M, Couderc M, Xu X, Chitikineni A, Scarcelli N, Barnaud A, Rhoné B, Dupuy C, François O, Berthouly-Salazar C, Vigouroux Y.

Nat Ecol Evol. 2018 Sep;2(9):1377-1380. doi: 10.1038/s41559-018-0643-y. Epub 2018 Aug 6.


The Rise and Fall of African Rice Cultivation Revealed by Analysis of 246 New Genomes.

Cubry P, Tranchant-Dubreuil C, Thuillet AC, Monat C, Ndjiondjop MN, Labadie K, Cruaud C, Engelen S, Scarcelli N, Rhoné B, Burgarella C, Dupuy C, Larmande P, Wincker P, François O, Sabot F, Vigouroux Y.

Curr Biol. 2018 Jul 23;28(14):2274-2282.e6. doi: 10.1016/j.cub.2018.05.066. Epub 2018 Jul 5.


Naturalgwas: An R package for evaluating genomewide association methods with empirical data.

François O, Caye K.

Mol Ecol Resour. 2018 Jul;18(4):789-797. doi: 10.1111/1755-0998.12892. Epub 2018 May 7.


Primary Results of the Multicenter ARISE II Study (Analysis of Revascularization in Ischemic Stroke With EmboTrap).

Zaidat OO, Bozorgchami H, Ribó M, Saver JL, Mattle HP, Chapot R, Narata AP, Francois O, Jadhav AP, Grossberg JA, Riedel CH, Tomasello A, Clark WM, Nordmeyer H, Lin E, Nogueira RG, Yoo AJ, Jovin TG, Siddiqui AH, Bernard T, Claffey M, Andersson T.

Stroke. 2018 May;49(5):1107-1115. doi: 10.1161/STROKEAHA.117.020125. Epub 2018 Apr 11.


Teaching removable partial denture design: 'METACIEL', a novel digital procedure.

Bonnet G, Lance C, Bessadet M, Tamini F, Veyrune JL, Francois O, Nicolas E.

Int J Med Educ. 2018 Jan 26;9:24-25. doi: 10.5116/ijme.5a5b.2b0d. No abstract available.


Oral declines and mastication deficiencies cause alteration of food bolus properties.

Peyron MA, Santé-Lhoutellier V, François O, Hennequin M.

Food Funct. 2018 Feb 21;9(2):1112-1122. doi: 10.1039/c7fo01628j.


At the Origin of a Worldwide Invasion: Unraveling the Genetic Makeup of the Caribbean Bridgehead Populations of the Dengue Vector Aedes aegypti.

Sherpa S, Rioux D, Goindin D, Fouque F, François O, Després L.

Genome Biol Evol. 2018 Jan 1;10(1):56-71. doi: 10.1093/gbe/evx267.


The Empirical Distribution of Singletons for Geographic Samples of DNA Sequences.

Cubry P, Vigouroux Y, François O.

Front Genet. 2017 Sep 29;8:139. doi: 10.3389/fgene.2017.00139. eCollection 2017.


Molecular basis of African yam domestication: analyses of selection point to root development, starch biosynthesis, and photosynthesis related genes.

Akakpo R, Scarcelli N, Chaïr H, Dansi A, Djedatin G, Thuillet AC, Rhoné B, François O, Alix K, Vigouroux Y.

BMC Genomics. 2017 Oct 12;18(1):782. doi: 10.1186/s12864-017-4143-2.


New insights into HCV replication in original cells from Aedes mosquitoes.

Fallecker C, Caporossi A, Rechoum Y, Garzoni F, Larrat S, François O, Fender P, Morand P, Berger I, Petit MA, Drouet E.

Virol J. 2017 Aug 22;14(1):161. doi: 10.1186/s12985-017-0828-z.


Ultradeep sequencing of B and non-B HIV-1 subtypes: Viral diversity and drug resistance mutations before and after one month of antiretroviral therapy in naive patients.

Epaulard O, Signori-Schmuck A, Larrat S, Kulkarni O, Blum MG, Fusillier K, Blanc M, Leclercq P, François O, Morand P.

J Clin Virol. 2017 Oct;95:13-19. doi: 10.1016/j.jcv.2017.07.013. Epub 2017 Jul 25.


Neutrophil extracellular traps in ischemic stroke thrombi.

Laridan E, Denorme F, Desender L, François O, Andersson T, Deckmyn H, Vanhoorelbeke K, De Meyer SF.

Ann Neurol. 2017 Aug;82(2):223-232. doi: 10.1002/ana.24993. Epub 2017 Aug 11.


Identifying outlier loci in admixed and in continuous populations using ancestral population differentiation statistics.

Martins H, Caye K, Luu K, Blum MG, François O.

Mol Ecol. 2016 Oct;25(20):5029-5042. doi: 10.1111/mec.13822. Epub 2016 Sep 14.


First next-generation sequencing full-genome characterization of a hepatitis C virus genotype 7 divergent subtype.

Salmona M, Caporossi A, Simmonds P, Thélu MA, Fusillier K, Mercier-Delarue S, De Castro N, LeGoff J, Chaix ML, François O, Simon F, Morand P, Larrat S, Maylin S.

Clin Microbiol Infect. 2016 Nov;22(11):947.e1-947.e8. doi: 10.1016/j.cmi.2016.07.032. Epub 2016 Aug 8.


Overdiagnosis and overtreatment associated with breast cancer mammography screening: A simulation study with calibration to population-based data.

Seigneurin A, Labarère J, François O, Exbrayat C, Dupouy M, Filippi M, Colonna M.

Breast. 2016 Aug;28:60-6. doi: 10.1016/j.breast.2016.04.013. Epub 2016 May 27.


ADAMTS13-mediated thrombolysis of t-PA-resistant occlusions in ischemic stroke in mice.

Denorme F, Langhauser F, Desender L, Vandenbulcke A, Rottensteiner H, Plaimauer B, François O, Andersson T, Deckmyn H, Scheiflinger F, Kleinschnitz C, Vanhoorelbeke K, De Meyer SF.

Blood. 2016 May 12;127(19):2337-45. doi: 10.1182/blood-2015-08-662650. Epub 2016 Feb 29.


Amplification and pyrosequencing of near-full-length hepatitis C virus for typing and monitoring antiviral resistant strains.

Trémeaux P, Caporossi A, Ramière C, Santoni E, Tarbouriech N, Thélu MA, Fusillier K, Geneletti L, François O, Leroy V, Burmeister WP, André P, Morand P, Larrat S.

Clin Microbiol Infect. 2016 May;22(5):460.e1-460.e10. doi: 10.1016/j.cmi.2016.01.015. Epub 2016 Jan 28.


Controlling false discoveries in genome scans for selection.

François O, Martins H, Caye K, Schoville SD.

Mol Ecol. 2016 Jan;25(2):454-69. doi: 10.1111/mec.13513. Epub 2016 Jan 18. Review.


Development and validation of a new dynamic computer-controlled model of the human stomach and small intestine.

Guerra A, Denis S, le Goff O, Sicardi V, François O, Yao AF, Garrait G, Manzi AP, Beyssac E, Alric M, Blanquet-Diot S.

Biotechnol Bioeng. 2016 Jun;113(6):1325-35. doi: 10.1002/bit.25890. Epub 2015 Dec 10.


TESS3: fast inference of spatial population structure and genome scans for selection.

Caye K, Deist TM, Martins H, Michel O, François O.

Mol Ecol Resour. 2016 Mar;16(2):540-8. doi: 10.1111/1755-0998.12471. Epub 2015 Oct 17.


Detecting adaptive evolution based on association with ecological gradients: orientation matters!

Frichot E, Schoville SD, de Villemereuil P, Gaggiotti OE, François O.

Heredity (Edinb). 2015 Jul;115(1):22-8. doi: 10.1038/hdy.2015.7. Epub 2015 Feb 18.


Ultradeep pyrosequencing of NS3 to predict response to triple therapy with protease inhibitors in previously treated chronic hepatitis C patients.

Larrat S, Kulkarni O, Claude JB, Beugnot R, Blum MG, Fusillier K, Lupo J, Tremeaux P, Plages A, Marlu A, Duborjal H, Signori-Schmuck A, Francois O, Zarski JP, Morand P, Leroy V.

J Clin Microbiol. 2015 Feb;53(2):389-97. doi: 10.1128/JCM.02547-14. Epub 2014 Nov 19.


Microvascular MRI and unsupervised clustering yields histology-resembling images in two rat models of glioma.

Coquery N, Francois O, Lemasson B, Debacker C, Farion R, Rémy C, Barbier EL.

J Cereb Blood Flow Metab. 2014 Aug;34(8):1354-62. doi: 10.1038/jcbfm.2014.90. Epub 2014 May 21.


Genome scan methods against more complex models: when and how much should we trust them?

de Villemereuil P, Frichot É, Bazin É, François O, Gaggiotti OE.

Mol Ecol. 2014 Apr;23(8):2006-19. doi: 10.1111/mec.12705. Epub 2014 Apr 5.


Fast and efficient estimation of individual ancestry coefficients.

Frichot E, Mathieu F, Trouillon T, Bouchard G, François O.

Genetics. 2014 Apr;196(4):973-83. doi: 10.1534/genetics.113.160572. Epub 2014 Feb 4.


Testing for associations between loci and environmental gradients using latent factor mixed models.

Frichot E, Schoville SD, Bouchard G, François O.

Mol Biol Evol. 2013 Jul;30(7):1687-99. doi: 10.1093/molbev/mst063. Epub 2013 Mar 29.


The vertebral bunny waveform: an early manifestation of the subclavian steal syndrome.

De Brucker Y, Peeters E, Goethals LR, Van Looveren K, François O, Van Hedent E.

JBR-BTR. 2012 Sep-Oct;95(5):340. No abstract available.


Correcting principal component maps for effects of spatial autocorrelation in population genetic data.

Frichot E, Schoville S, Bouchard G, François O.

Front Genet. 2012 Nov 20;3:254. doi: 10.3389/fgene.2012.00254. eCollection 2012.


Influence of admixture and paleolithic range contractions on current European diversity gradients.

Arenas M, François O, Currat M, Ray N, Excoffier L.

Mol Biol Evol. 2013 Jan;30(1):57-61. doi: 10.1093/molbev/mss203. Epub 2012 Aug 25.


Forecasting changes in population genetic structure of alpine plants in response to global warming.

Jay F, Manel S, Alvarez N, Durand EY, Thuiller W, Holderegger R, Taberlet P, François O.

Mol Ecol. 2012 May;21(10):2354-68. doi: 10.1111/j.1365-294X.2012.05541.x. Epub 2012 Apr 18.


Overdiagnosis from non-progressive cancer detected by screening mammography: stochastic simulation study with calibration to population based registry data.

Seigneurin A, François O, Labarère J, Oudeville P, Monlong J, Colonna M.

BMJ. 2011 Nov 23;343:d7017. doi: 10.1136/bmj.d7017.


Wave-of-advance models of the diffusion of the Y chromosome haplogroup R1b1b2 in Europe.

Sjödin P, François O.

PLoS One. 2011;6(6):e21592. doi: 10.1371/journal.pone.0021592. Epub 2011 Jun 24.


Spatially explicit Bayesian clustering models in population genetics.

François O, Durand E.

Mol Ecol Resour. 2010 Sep;10(5):773-84. doi: 10.1111/j.1755-0998.2010.02868.x. Epub 2010 May 17.


Guns, germs and dogs: On the origin of Leishmania chagasi.

Leblois R, Kuhls K, François O, Schönian G, Wirth T.

Infect Genet Evol. 2011 Jul;11(5):1091-5. doi: 10.1016/j.meegid.2011.04.004. Epub 2011 Apr 12.


Predictions of native American population structure using linguistic covariates in a hidden regression framework.

Jay F, François O, Blum MG.

PLoS One. 2011 Jan 31;6(1):e16227. doi: 10.1371/journal.pone.0016227.


Approximate Bayesian Computation (ABC) in practice.

Csilléry K, Blum MG, Gaggiotti OE, François O.

Trends Ecol Evol. 2010 Jul;25(7):410-8. doi: 10.1016/j.tree.2010.04.001. Epub 2010 May 18. Review.


Development and validation of a mastication simulator.

Woda A, Mishellany-Dutour A, Batier L, François O, Meunier JP, Reynaud B, Alric M, Peyron MA.

J Biomech. 2010 Jun 18;43(9):1667-73. doi: 10.1016/j.jbiomech.2010.03.002. Epub 2010 Apr 13.


Principal component analysis under population genetic models of range expansion and admixture.

François O, Currat M, Ray N, Han E, Excoffier L, Novembre J.

Mol Biol Evol. 2010 Jun;27(6):1257-68. doi: 10.1093/molbev/msq010. Epub 2010 Jan 21.


Comment on 'On the inference of spatial structure from population genetics data'.

Durand E, Chen C, François O.

Bioinformatics. 2009 Jul 15;25(14):1802-4; author reply 1805-6. doi: 10.1093/bioinformatics/btp337. No abstract available.


Spatial inference of admixture proportions and secondary contact zones.

Durand E, Jay F, Gaggiotti OE, François O.

Mol Biol Evol. 2009 Sep;26(9):1963-73. doi: 10.1093/molbev/msp106. Epub 2009 May 21.


Joint analysis of spatial genetic structure and inbreeding in a managed population of Scots pine.

García-Gil MR, François O, Kamruzzahan S, Waldmann P.

Heredity (Edinb). 2009 Jul;103(1):90-6. doi: 10.1038/hdy.2009.33. Epub 2009 Apr 22. Erratum in: Heredity. 2009 Jul;103(1):97. Olivier, F [corrected to François, O].

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