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Whole-Genome Sequencing-Based Characterization of 100 Listeria monocytogenes Isolates Collected from Food Processing Environments over a Four-Year Period.

Hurley D, Luque-Sastre L, Parker CT, Huynh S, Eshwar AK, Nguyen SV, Andrews N, Moura A, Fox EM, Jordan K, Lehner A, Stephan R, Fanning S.

mSphere. 2019 Aug 7;4(4). pii: e00252-19. doi: 10.1128/mSphere.00252-19.


Comparative Genomics and Phenotypic Investigations Into Antibiotic, Heavy Metal, and Disinfectant Susceptibilities of Salmonella enterica Strains Isolated in Australia.

Wilson A, Fox EM, Fegan N, Kurtböke DÍ.

Front Microbiol. 2019 Jul 16;10:1620. doi: 10.3389/fmicb.2019.01620. eCollection 2019.


Typing and evaluating heat resistance of Bacillus cereus sensu stricto isolated from the processing environment of powdered infant formula.

Zhuang K, Li H, Zhang Z, Wu S, Zhang Y, Fox EM, Man C, Jiang Y.

J Dairy Sci. 2019 Sep;102(9):7781-7793. doi: 10.3168/jds.2019-16392. Epub 2019 Jun 27.


A multicomponent toxin from Bacillus cereus incites inflammation and shapes host outcome via the NLRP3 inflammasome.

Mathur A, Feng S, Hayward JA, Ngo C, Fox D, Atmosukarto II, Price JD, Schauer K, Märtlbauer E, Robertson AAB, Burgio G, Fox EM, Leppla SH, Kaakoush NO, Man SM.

Nat Microbiol. 2019 Feb;4(2):362-374. doi: 10.1038/s41564-018-0318-0. Epub 2018 Dec 10.


Silver nanoparticles: A novel antibacterial agent for control of Cronobacter sakazakii.

Wang H, Jiang Y, Zhang Y, Zhang Z, Yang X, Ali MA, Fox EM, Gobius KS, Man C.

J Dairy Sci. 2018 Dec;101(12):10775-10791. doi: 10.3168/jds.2018-15258. Epub 2018 Oct 11.


A Comparative Study of the Susceptibility of Listeria Species to Sanitizer Treatments When Grown under Planktonic and Biofilm Conditions.

Luque-Sastre L, Fox EM, Jordan K, Fanning S.

J Food Prot. 2018 Sep;81(9):1481-1490. doi: 10.4315/0362-028X.JFP-17-466.


Antimicrobial Resistance in Listeria Species.

Luque-Sastre L, Arroyo C, Fox EM, McMahon BJ, Bai L, Li F, Fanning S.

Microbiol Spectr. 2018 Jul;6(4). doi: 10.1128/microbiolspec.ARBA-0031-2017. Review.


Virulence Gene Sequencing Highlights Similarities and Differences in Sequences in Listeria monocytogenes Serotype 1/2a and 4b Strains of Clinical and Food Origin From 3 Different Geographic Locations.

Poimenidou SV, Dalmasso M, Papadimitriou K, Fox EM, Skandamis PN, Jordan K.

Front Microbiol. 2018 Jun 5;9:1103. doi: 10.3389/fmicb.2018.01103. eCollection 2018.


Novel Biocontrol Methods for Listeria monocytogenes Biofilms in Food Production Facilities.

Gray JA, Chandry PS, Kaur M, Kocharunchitt C, Bowman JP, Fox EM.

Front Microbiol. 2018 Apr 3;9:605. doi: 10.3389/fmicb.2018.00605. eCollection 2018. Review.


Phenotypic and Genotypic Analysis of Antimicrobial Resistance among Listeria monocytogenes Isolated from Australian Food Production Chains.

Wilson A, Gray J, Chandry PS, Fox EM.

Genes (Basel). 2018 Feb 9;9(2). pii: E80. doi: 10.3390/genes9020080.


Characterization of Escherichia coli and Salmonella from Victoria, Australia, Dairy Farm Environments.

McAuley CM, McMillan KE, Moore SC, Fegan N, Fox EM.

J Food Prot. 2017 Dec;80(12):2078-2082. doi: 10.4315/0362-028X.JFP-17-044.


Vibrational spectroscopy combined with transcriptomic analysis for investigation of bacterial responses towards acid stress.

Hlaing MM, Wood BR, McNaughton D, Rood JI, Fox EM, Augustin MA.

Appl Microbiol Biotechnol. 2018 Jan;102(1):333-343. doi: 10.1007/s00253-017-8561-5. Epub 2017 Oct 29.


Editorial: Microbial Food Safety along the Dairy Chain.

Fox EM, Fanning S, Corsetti A, Jordan K.

Front Microbiol. 2017 Aug 23;8:1612. doi: 10.3389/fmicb.2017.01612. eCollection 2017. No abstract available.


Draft Genome Sequence of Leifsonia sp. Strain NCR5, a Rhizobacterium Isolated from Cadmium-Contaminated Soil.

Egidi E, Wood JL, Fox EM, Liu W, Franks AE.

Genome Announc. 2017 Jun 8;5(23). pii: e00520-17. doi: 10.1128/genomeA.00520-17.


Analysis of the Listeria monocytogenes Population Structure among Isolates from 1931 to 2015 in Australia.

Jennison AV, Masson JJ, Fang NX, Graham RM, Bradbury MI, Fegan N, Gobius KS, Graham TM, Guglielmino CJ, Brown JL, Fox EM.

Front Microbiol. 2017 Apr 6;8:603. doi: 10.3389/fmicb.2017.00603. eCollection 2017.


Draft Genome Sequences of 15 Staphylococcus aureus Isolates Recovered from Raw Milk and Associated Milk Filters from Victoria, Australia.

McMillan K, Allnutt TR, Fox EM.

Genome Announc. 2017 Jan 12;5(2). pii: e01463-16. doi: 10.1128/genomeA.01463-16.


Comparative Genomics of the Listeria monocytogenes ST204 Subgroup.

Fox EM, Allnutt T, Bradbury MI, Fanning S, Chandry PS.

Front Microbiol. 2016 Dec 22;7:2057. doi: 10.3389/fmicb.2016.02057. eCollection 2016.


Draft Genome Sequence of Rhodococcus erythropolis NSX2, an Actinobacterium Isolated from a Cadmium-Contaminated Environment.

Egidi E, Wood JL, Fox EM, Liu W, Franks AE.

Genome Announc. 2016 Oct 20;4(5). pii: e01147-16. doi: 10.1128/genomeA.01147-16.


Draft Genome Sequence of Enterobacter ludwigii NCR3, a Heavy Metal-Resistant Rhizobacterium.

Egidi E, Wood JL, Aracic S, Kannan R, McDonald L, Bell CA, Fox EM, Liu W, Franks AE.

Genome Announc. 2016 Oct 6;4(5). pii: e01076-16. doi: 10.1128/genomeA.01076-16.


Draft Genome Sequences of 15 Isolates of Listeria monocytogenes Serotype 1/2a, Subgroup ST204.

Allnutt TR, Bradbury MI, Fanning S, Chandry PS, Fox EM.

Genome Announc. 2016 Sep 8;4(5). pii: e00935-16. doi: 10.1128/genomeA.00935-16.


Characterization of Staphylococcus aureus isolates from raw milk sources in Victoria, Australia.

McMillan K, Moore SC, McAuley CM, Fegan N, Fox EM.

BMC Microbiol. 2016 Jul 29;16(1):169. doi: 10.1186/s12866-016-0789-1.


Draft Genome Sequences of Listeria monocytogenes Serotype 4b Strains 944 and 2993 and Serotype 1/2c Strains 198 and 2932.

Casey A, McAuliffe O, Fox EM, Leong D, Gahan CG, Jordan K.

Genome Announc. 2016 Jun 2;4(3). pii: e00482-16. doi: 10.1128/genomeA.00482-16.


Seasonal occurrence and molecular diversity of clostridia species spores along cheesemaking streams of 5 commercial dairy plants.

Bermúdez J, González MJ, Olivera JA, Burgueño JA, Juliano P, Fox EM, Reginensi SM.

J Dairy Sci. 2016 May;99(5):3358-3366. doi: 10.3168/jds.2015-10079. Epub 2016 Feb 28.


Correction: Histamine 1 Receptor Blockade Enhances Eosinophil-Mediated Clearance of Adult Filarial Worms.

Fox EM, Morris CP, Hübner MP, Mitre E.

PLoS Negl Trop Dis. 2015 Aug 19;9(8):e0004034. doi: 10.1371/journal.pntd.0004034. eCollection 2015 Aug. No abstract available.


Differential Gene Expression of Three Gene Targets among Persistent and Nonpersistent Listeria monocytogenes Strains in the Presence or Absence of Benzethonium Chloride.

Mazza R, Mazzette R, McAuliffe O, Jordan K, Fox EM.

J Food Prot. 2015 Aug;78(8):1569-73. doi: 10.4315/0362-028X.JFP-14-510.


Histamine 1 Receptor Blockade Enhances Eosinophil-Mediated Clearance of Adult Filarial Worms.

Fox EM, Morris CP, Hübner MP, Mitre E.

PLoS Negl Trop Dis. 2015 Jul 23;9(7):e0003932. doi: 10.1371/journal.pntd.0003932. eCollection 2015. Erratum in: PLoS Negl Trop Dis. 2015 Aug;9(8):e0004034.


Control of Listeria species food safety at a poultry food production facility.

Fox EM, Wall PG, Fanning S.

Food Microbiol. 2015 Oct;51:81-6. doi: 10.1016/ Epub 2015 May 21.


Characterization of the spore-forming Bacillus cereus sensu lato group and Clostridium perfringens bacteria isolated from the Australian dairy farm environment.

Dréan P, McAuley CM, Moore SC, Fegan N, Fox EM.

BMC Microbiol. 2015 Feb 19;15:38. doi: 10.1186/s12866-015-0377-9.


Pulsed-field gel electrophoresis of Bacillus cereus group strains.

Drean P, Fox EM.

Methods Mol Biol. 2015;1301:71-83. doi: 10.1007/978-1-4939-2599-5_7.


Pulsed-field gel electrophoresis for Listeria monocytogenes.

Luque-Sastre L, Fanning S, Fox EM.

Methods Mol Biol. 2015;1301:43-53. doi: 10.1007/978-1-4939-2599-5_5.


Rapid identification and source-tracking of Listeria monocytogenes using MALDI-TOF mass spectrometry.

Jadhav S, Gulati V, Fox EM, Karpe A, Beale DJ, Sevior D, Bhave M, Palombo EA.

Int J Food Microbiol. 2015 Jun 2;202:1-9. doi: 10.1016/j.ijfoodmicro.2015.01.023. Epub 2015 Feb 24.


LYN-activating mutations mediate antiestrogen resistance in estrogen receptor-positive breast cancer.

Schwarz LJ, Fox EM, Balko JM, Garrett JT, Kuba MG, Estrada MV, González-Angulo AM, Mills GB, Red-Brewer M, Mayer IA, Abramson V, Rizzo M, Kelley MC, Meszoely IM, Arteaga CL.

J Clin Invest. 2014 Dec;124(12):5490-502. doi: 10.1172/JCI72573. Epub 2014 Nov 17.


Prevalence and characterization of foodborne pathogens from Australian dairy farm environments.

McAuley CM, McMillan K, Moore SC, Fegan N, Fox EM.

J Dairy Sci. 2014 Dec;97(12):7402-12. doi: 10.3168/jds.2014-8735. Epub 2014 Oct 3.


Immunologic characterization of 3 murine regimens of allergen-specific immunotherapy.

Fox EM, Torrero MN, Evans H, Mitre E.

J Allergy Clin Immunol. 2015 May;135(5):1341-51.e1-7. doi: 10.1016/j.jaci.2014.07.052. Epub 2014 Oct 3.


Comparison of Listeria monocytogenes isolates across the island of Ireland.

Hurley D, Luque-Sastre L, DeLappe N, Moore JE, Cormican M, Jordan KN, Fanning S, Fox EM.

J Food Prot. 2014 Aug;77(8):1402-6. doi: 10.4315/0362-028X.JFP-14-026.


High-throughput characterization of Listeria monocytogenes using the OmniLog Phenotypic Microarray.

Fox EM, Jordan K.

Methods Mol Biol. 2014;1157:103-8. doi: 10.1007/978-1-4939-0703-8_9.


Phylogenetic profiles of in-house microflora in drains at a food production facility: comparison and biocontrol implications of Listeria-positive and -negative bacterial populations.

Fox EM, Solomon K, Moore JE, Wall PG, Fanning S.

Appl Environ Microbiol. 2014 Jun;80(11):3369-74. doi: 10.1128/AEM.00468-14. Epub 2014 Mar 21.


Transcriptome analysis of Listeria monocytogenes exposed to biocide stress reveals a multi-system response involving cell wall synthesis, sugar uptake, and motility.

Casey A, Fox EM, Schmitz-Esser S, Coffey A, McAuliffe O, Jordan K.

Front Microbiol. 2014 Feb 28;5:68. doi: 10.3389/fmicb.2014.00068. eCollection 2014.


Basophils help establish protective immunity induced by irradiated larval vaccination for filariasis.

Torrero MN, Morris CP, Mitre BK, Hübner MP, Fox EM, Karasuyama H, Mitre E.

Vaccine. 2013 Aug 12;31(36):3675-82. doi: 10.1016/j.vaccine.2013.06.010. Epub 2013 Jun 15.


Genome sequence of Cronobacter sakazakii SP291, a persistent thermotolerant isolate derived from a factory producing powdered infant formula.

Power KA, Yan Q, Fox EM, Cooney S, Fanning S.

Genome Announc. 2013 Mar 21;1(2):e0008213. doi: 10.1128/genomeA.00082-13.


Abrogating endocrine resistance by targeting ERα and PI3K in breast cancer.

Fox EM, Arteaga CL, Miller TW.

Front Oncol. 2012 Oct 16;2:145. doi: 10.3389/fonc.2012.00145. eCollection 2012.


Surveillance of verocytotoxigenic Escherichia coli in Irish bovine dairy herds.

Lynch MJ, Fox EM, O'Connor L, Jordan K, Murphy M.

Zoonoses Public Health. 2012 Jun;59(4):264-71. doi: 10.1111/j.1863-2378.2011.01443.x. Epub 2011 Nov 30.


PFGE analysis of Listeria monocytogenes isolates of clinical, animal, food and environmental origin from Ireland.

Fox EM, deLappe N, Garvey P, McKeown P, Cormican M, Leonard N, Jordan K.

J Med Microbiol. 2012 Apr;61(Pt 4):540-7. doi: 10.1099/jmm.0.036764-0. Epub 2011 Nov 24.


ERα-dependent E2F transcription can mediate resistance to estrogen deprivation in human breast cancer.

Miller TW, Balko JM, Fox EM, Ghazoui Z, Dunbier A, Anderson H, Dowsett M, Jiang A, Smith RA, Maira SM, Manning HC, González-Angulo AM, Mills GB, Higham C, Chanthaphaychith S, Kuba MG, Miller WR, Shyr Y, Arteaga CL.

Cancer Discov. 2011 Sep;1(4):338-51. doi: 10.1158/2159-8290.CD-11-0101. Epub 2011 Jul 20.


A kinome-wide screen identifies the insulin/IGF-I receptor pathway as a mechanism of escape from hormone dependence in breast cancer.

Fox EM, Miller TW, Balko JM, Kuba MG, Sánchez V, Smith RA, Liu S, González-Angulo AM, Mills GB, Ye F, Shyr Y, Manning HC, Buck E, Arteaga CL.

Cancer Res. 2011 Nov 1;71(21):6773-84. doi: 10.1158/0008-5472.CAN-11-1295. Epub 2011 Sep 9.


The cross-pathway control system regulates production of the secondary metabolite toxin, sirodesmin PL, in the ascomycete, Leptosphaeria maculans.

Elliott CE, Fox EM, Jarvis RS, Howlett BJ.

BMC Microbiol. 2011 Jul 26;11:169. doi: 10.1186/1471-2180-11-169.


Physiological and transcriptional characterization of persistent and nonpersistent Listeria monocytogenes isolates.

Fox EM, Leonard N, Jordan K.

Appl Environ Microbiol. 2011 Sep;77(18):6559-69. doi: 10.1128/AEM.05529-11. Epub 2011 Jul 15.

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