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Items: 25

1.

Stunted microbiota and opportunistic pathogen colonization in caesarean-section birth.

Shao Y, Forster SC, Tsaliki E, Vervier K, Strang A, Simpson N, Kumar N, Stares MD, Rodger A, Brocklehurst P, Field N, Lawley TD.

Nature. 2019 Oct;574(7776):117-121. doi: 10.1038/s41586-019-1560-1. Epub 2019 Sep 18.

PMID:
31534227
2.

The future of faecal transplants.

Giles EM, D'Adamo GL, Forster SC.

Nat Rev Microbiol. 2019 Dec;17(12):719. doi: 10.1038/s41579-019-0271-9. Epub 2019 Sep 18. No abstract available.

PMID:
31534208
3.

CiiiDER: A tool for predicting and analysing transcription factor binding sites.

Gearing LJ, Cumming HE, Chapman R, Finkel AM, Woodhouse IB, Luu K, Gould JA, Forster SC, Hertzog PJ.

PLoS One. 2019 Sep 4;14(9):e0215495. doi: 10.1371/journal.pone.0215495. eCollection 2019.

4.

Adaptation of host transmission cycle during Clostridium difficile speciation.

Kumar N, Browne HP, Viciani E, Forster SC, Clare S, Harcourt K, Stares MD, Dougan G, Fairley DJ, Roberts P, Pirmohamed M, Clokie MRJ, Jensen MBF, Hargreaves KR, Ip M, Wieler LH, Seyboldt C, Norén T, Riley TV, Kuijper EJ, Wren BW, Lawley TD.

Nat Genet. 2019 Sep;51(9):1315-1320. doi: 10.1038/s41588-019-0478-8. Epub 2019 Aug 12.

PMID:
31406348
5.

A new genomic blueprint of the human gut microbiota.

Almeida A, Mitchell AL, Boland M, Forster SC, Gloor GB, Tarkowska A, Lawley TD, Finn RD.

Nature. 2019 Apr;568(7753):499-504. doi: 10.1038/s41586-019-0965-1. Epub 2019 Feb 11.

6.

A human gut bacterial genome and culture collection for improved metagenomic analyses.

Forster SC, Kumar N, Anonye BO, Almeida A, Viciani E, Stares MD, Dunn M, Mkandawire TT, Zhu A, Shao Y, Pike LJ, Louie T, Browne HP, Mitchell AL, Neville BA, Finn RD, Lawley TD.

Nat Biotechnol. 2019 Feb;37(2):186-192. doi: 10.1038/s41587-018-0009-7. Epub 2019 Feb 4.

7.

The microgenderome revealed: sex differences in bidirectional interactions between the microbiota, hormones, immunity and disease susceptibility.

Vemuri R, Sylvia KE, Klein SL, Forster SC, Plebanski M, Eri R, Flanagan KL.

Semin Immunopathol. 2019 Mar;41(2):265-275. doi: 10.1007/s00281-018-0716-7. Epub 2018 Oct 8. Review.

8.

Reduced PRC2 function alters male germline epigenetic programming and paternal inheritance.

Stringer JM, Forster SC, Qu Z, Prokopuk L, O'Bryan MK, Gardner DK, White SJ, Adelson D, Western PS.

BMC Biol. 2018 Sep 20;16(1):104. doi: 10.1186/s12915-018-0569-5.

9.

Culturing of female bladder bacteria reveals an interconnected urogenital microbiota.

Thomas-White K, Forster SC, Kumar N, Van Kuiken M, Putonti C, Stares MD, Hilt EE, Price TK, Wolfe AJ, Lawley TD.

Nat Commun. 2018 Apr 19;9(1):1557. doi: 10.1038/s41467-018-03968-5.

10.

Concurrent Host-Pathogen Transcriptional Responses in a Clostridium perfringens Murine Myonecrosis Infection.

Low LY, Harrison PF, Gould J, Powell DR, Choo JM, Forster SC, Chapman R, Gearing LJ, Cheung JK, Hertzog P, Rood JI.

MBio. 2018 Mar 27;9(2). pii: e00473-18. doi: 10.1128/mBio.00473-18.

11.

A new piece in the microbiome puzzle.

Pike LJ, Forster SC.

Nat Rev Microbiol. 2018 Apr;16(4):186. doi: 10.1038/nrmicro.2018.24. Epub 2018 Feb 19. No abstract available.

PMID:
29456244
12.

Zoonotic Transfer of Clostridium difficile Harboring Antimicrobial Resistance between Farm Animals and Humans.

Knetsch CW, Kumar N, Forster SC, Connor TR, Browne HP, Harmanus C, Sanders IM, Harris SR, Turner L, Morris T, Perry M, Miyajima F, Roberts P, Pirmohamed M, Songer JG, Weese JS, Indra A, Corver J, Rupnik M, Wren BW, Riley TV, Kuijper EJ, Lawley TD.

J Clin Microbiol. 2018 Feb 22;56(3). pii: e01384-17. doi: 10.1128/JCM.01384-17. Print 2018 Mar.

13.

Distinct Campylobacter fetus lineages adapted as livestock pathogens and human pathobionts in the intestinal microbiota.

Iraola G, Forster SC, Kumar N, Lehours P, Bekal S, García-Peña FJ, Paolicchi F, Morsella C, Hotzel H, Hsueh PR, Vidal A, Lévesque S, Yamazaki W, Balzan C, Vargas A, Piccirillo A, Chaban B, Hill JE, Betancor L, Collado L, Truyers I, Midwinter AC, Dagi HT, Mégraud F, Calleros L, Pérez R, Naya H, Lawley TD.

Nat Commun. 2017 Nov 8;8(1):1367. doi: 10.1038/s41467-017-01449-9.

14.

Commensal Koch's postulates: establishing causation in human microbiota research.

Neville BA, Forster SC, Lawley TD.

Curr Opin Microbiol. 2018 Apr;42:47-52. doi: 10.1016/j.mib.2017.10.001. Epub 2017 Nov 4. Review.

15.

Genome watch: Microbiota shuns the modern world.

Kumar N, Forster SC.

Nat Rev Microbiol. 2017 Dec;15(12):710. doi: 10.1038/nrmicro.2017.136. Epub 2017 Oct 30. No abstract available.

PMID:
29081498
16.

Illuminating microbial diversity.

Forster SC.

Nat Rev Microbiol. 2017 Oct;15(10):578. doi: 10.1038/nrmicro.2017.106. Epub 2017 Aug 30. No abstract available.

PMID:
28852214
17.

Transmission of the gut microbiota: spreading of health.

Browne HP, Neville BA, Forster SC, Lawley TD.

Nat Rev Microbiol. 2017 Sep;15(9):531-543. doi: 10.1038/nrmicro.2017.50. Epub 2017 Jun 12. Review.

18.

Culturing of 'unculturable' human microbiota reveals novel taxa and extensive sporulation.

Browne HP, Forster SC, Anonye BO, Kumar N, Neville BA, Stares MD, Goulding D, Lawley TD.

Nature. 2016 May 26;533(7604):543-546. doi: 10.1038/nature17645. Epub 2016 May 4.

19.

HPMCD: the database of human microbial communities from metagenomic datasets and microbial reference genomes.

Forster SC, Browne HP, Kumar N, Hunt M, Denise H, Mitchell A, Finn RD, Lawley TD.

Nucleic Acids Res. 2016 Jan 4;44(D1):D604-9. doi: 10.1093/nar/gkv1216. Epub 2015 Nov 17.

20.

MicroRNA as Type I Interferon-Regulated Transcripts and Modulators of the Innate Immune Response.

Forster SC, Tate MD, Hertzog PJ.

Front Immunol. 2015 Jul 8;6:334. doi: 10.3389/fimmu.2015.00334. eCollection 2015. Review.

21.

Systematic discovery of probiotics.

Forster SC, Lawley TD.

Nat Biotechnol. 2015 Jan;33(1):47-9. doi: 10.1038/nbt.3111. No abstract available.

PMID:
25574637
22.

Sequence-dependent off-target inhibition of TLR7/8 sensing by synthetic microRNA inhibitors.

Sarvestani ST, Stunden HJ, Behlke MA, Forster SC, McCoy CE, Tate MD, Ferrand J, Lennox KA, Latz E, Williams BR, Gantier MP.

Nucleic Acids Res. 2015 Jan;43(2):1177-88. doi: 10.1093/nar/gku1343. Epub 2014 Dec 24.

23.

Structural basis of a unique interferon-β signaling axis mediated via the receptor IFNAR1.

de Weerd NA, Vivian JP, Nguyen TK, Mangan NE, Gould JA, Braniff SJ, Zaker-Tabrizi L, Fung KY, Forster SC, Beddoe T, Reid HH, Rossjohn J, Hertzog PJ.

Nat Immunol. 2013 Sep;14(9):901-7. doi: 10.1038/ni.2667. Epub 2013 Jul 21.

PMID:
23872679
24.

RNA-eXpress annotates novel transcript features in RNA-seq data.

Forster SC, Finkel AM, Gould JA, Hertzog PJ.

Bioinformatics. 2013 Mar 15;29(6):810-2. doi: 10.1093/bioinformatics/btt034. Epub 2013 Feb 8.

25.

Portal hypertension in schistosomiasis: a long-term follow-up of a randomized trial comparing three types of surgery.

Raia S, da Silva LC, Gayotto LC, Forster SC, Fukushima J, Strauss E.

Hepatology. 1994 Aug;20(2):398-403.

PMID:
8045501

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