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Items: 16

1.

Correction to: Silencing of a BAHD acyltransferase in sugarcane increases biomass digestibility.

de Souza WR, Pacheco TF, Duarte KE, Sampaio BL, de Oliveira Molinari PA, Martins PK, Santiago TR, Formighieri EF, Vinecky F, Ribeiro AP, da Cunha BADB, Kobayashi AK, Mitchell RAC, de Sousa Rodrigues Gambetta D, Molinari HBC.

Biotechnol Biofuels. 2019 Jun 8;12:142. doi: 10.1186/s13068-019-1482-z. eCollection 2019.

2.

Silencing of a BAHD acyltransferase in sugarcane increases biomass digestibility.

de Souza WR, Pacheco TF, Duarte KE, Sampaio BL, de Oliveira Molinari PA, Martins PK, Santiago TR, Formighieri EF, Vinecky F, Ribeiro AP, da Cunha BADB, Kobayashi AK, Mitchell RAC, de Sousa Rodrigues Gambetta D, Molinari HBC.

Biotechnol Biofuels. 2019 May 6;12:111. doi: 10.1186/s13068-019-1450-7. eCollection 2019. Erratum in: Biotechnol Biofuels. 2019 Jun 8;12:142.

3.

Physiological and comparative genomic analysis of new isolated yeasts Spathaspora sp. JA1 and Meyerozyma caribbica JA9 reveal insights into xylitol production.

Trichez D, Steindorff AS, Soares CEVF, Formighieri EF, Almeida JRM.

FEMS Yeast Res. 2019 Jun 1;19(4). pii: foz034. doi: 10.1093/femsyr/foz034.

PMID:
31073598
4.

Correction: Genome-wide identification, characterization and expression profile analysis of expansins gene family in sugarcane (Saccharum spp.).

Santiago TR, Pereira VM, de Souza WR, Steindorff AS, Cunha BADB, Gaspar M, Fávaro LCL, Formighieri EF, Kobayashi AK, Molinari HBC.

PLoS One. 2018 Apr 17;13(4):e0196140. doi: 10.1371/journal.pone.0196140. eCollection 2018.

5.

Genome-wide identification, characterization and expression profile analysis of expansins gene family in sugarcane (Saccharum spp.).

Santiago TR, Pereira VM, de Souza WR, Steindorff AS, Cunha BADB, Gaspar M, Fávaro LCL, Formighieri EF, Kobayashi AK, C Molinari HB.

PLoS One. 2018 Jan 11;13(1):e0191081. doi: 10.1371/journal.pone.0191081. eCollection 2018. Erratum in: PLoS One. 2018 Apr 17;13(4):e0196140.

6.

Insights into soybean transcriptome reconfiguration under hypoxic stress: Functional, regulatory, structural, and compositional characterization.

Nakayama TJ, Rodrigues FA, Neumaier N, Marcolino-Gomes J, Molinari HBC, Santiago TR, Formighieri EF, Basso MF, Farias JRB, Emygdio BM, de Oliveira ACB, Campos ÂD, Borém A, Harmon FG, Mertz-Henning LM, Nepomuceno AL.

PLoS One. 2017 Nov 16;12(11):e0187920. doi: 10.1371/journal.pone.0187920. eCollection 2017.

7.

In Silico Approach for Characterization and Comparison of Repeats in the Genomes of Oil and Date Palms.

Filho JAF, de Brito LS, Leão AP, Alves AA, Formighieri EF, Júnior MTS.

Bioinform Biol Insights. 2017 Apr 18;11:1177932217702388. doi: 10.1177/1177932217702388. eCollection 2017.

8.

Perennial plants for biofuel production: bridging genomics and field research.

Alves AA, Laviola BG, Formighieri EF, Carels N.

Biotechnol J. 2015 Apr;10(4):505-7. doi: 10.1002/biot.201400201. Epub 2014 Nov 10.

PMID:
25382800
9.

Reassessment of the Genome Size in Elaeis guineensis and Elaeis oleifera, and Its Interspecific Hybrid.

Camillo J, Leão AP, Alves AA, Formighieri EF, Azevedo AL, Nunes JD, de Capdeville G, de A Mattos JK, Souza MT Jr.

Genomics Insights. 2014 Sep 3;7:13-22. doi: 10.4137/GEI.S15522. eCollection 2014.

10.

Joint analysis of phenotypic and molecular diversity provides new insights on the genetic variability of the Brazilian physic nut germplasm bank.

Alves AA, Bhering LL, Rosado TB, Laviola BG, Formighieri EF, Cruz CD.

Genet Mol Biol. 2013 Sep;36(3):371-81. doi: 10.1590/S1415-47572013005000033. Epub 2013 Aug 16.

11.

A genome survey of Moniliophthora perniciosa gives new insights into Witches' Broom Disease of cacao.

Mondego JM, Carazzolle MF, Costa GG, Formighieri EF, Parizzi LP, Rincones J, Cotomacci C, Carraro DM, Cunha AF, Carrer H, Vidal RO, Estrela RC, García O, Thomazella DP, de Oliveira BV, Pires AB, Rio MC, Araújo MR, de Moraes MH, Castro LA, Gramacho KP, Gonçalves MS, Neto JP, Neto AG, Barbosa LV, Guiltinan MJ, Bailey BA, Meinhardt LW, Cascardo JC, Pereira GA.

BMC Genomics. 2008 Nov 18;9:548. doi: 10.1186/1471-2164-9-548.

12.

The mitochondrial genome of the phytopathogenic basidiomycete Moniliophthora perniciosa is 109 kb in size and contains a stable integrated plasmid.

Formighieri EF, Tiburcio RA, Armas ED, Medrano FJ, Shimo H, Carels N, Góes-Neto A, Cotomacci C, Carazzolle MF, Sardinha-Pinto N, Thomazella DP, Rincones J, Digiampietri L, Carraro DM, Azeredo-Espin AM, Reis SF, Deckmann AC, Gramacho K, Gonçalves MS, Moura Neto JP, Barbosa LV, Meinhardt LW, Cascardo JC, Pereira GA.

Mycol Res. 2008 Oct;112(Pt 10):1136-52. doi: 10.1016/j.mycres.2008.04.014. Epub 2008 May 11.

PMID:
18786820
13.

Differential gene expression between the biotrophic-like and saprotrophic mycelia of the witches' broom pathogen Moniliophthora perniciosa.

Rincones J, Scarpari LM, Carazzolle MF, Mondego JM, Formighieri EF, Barau JG, Costa GG, Carraro DM, Brentani HP, Vilas-Boas LA, de Oliveira BV, Sabha M, Dias R, Cascardo JM, Azevedo RA, Meinhardt LW, Pereira GA.

Mol Plant Microbe Interact. 2008 Jul;21(7):891-908. doi: 10.1094/MPMI-21-7-0891.

14.

Development, characterization, and comparative analysis of polymorphism at common bean SSR loci isolated from genic and genomic sources.

Hanai LR, de Campos T, Camargo LE, Benchimol LL, de Souza AP, Melotto M, Carbonell SA, Chioratto AF, Consoli L, Formighieri EF, Siqueira MV, Tsai SM, Vieira ML.

Genome. 2007 Mar;50(3):266-77.

PMID:
17502900
15.

Comparative analyses of the complete genome sequences of Pierce's disease and citrus variegated chlorosis strains of Xylella fastidiosa.

Van Sluys MA, de Oliveira MC, Monteiro-Vitorello CB, Miyaki CY, Furlan LR, Camargo LE, da Silva AC, Moon DH, Takita MA, Lemos EG, Machado MA, Ferro MI, da Silva FR, Goldman MH, Goldman GH, Lemos MV, El-Dorry H, Tsai SM, Carrer H, Carraro DM, de Oliveira RC, Nunes LR, Siqueira WJ, Coutinho LL, Kimura ET, Ferro ES, Harakava R, Kuramae EE, Marino CL, Giglioti E, Abreu IL, Alves LM, do Amaral AM, Baia GS, Blanco SR, Brito MS, Cannavan FS, Celestino AV, da Cunha AF, Fenille RC, Ferro JA, Formighieri EF, Kishi LT, Leoni SG, Oliveira AR, Rosa VE Jr, Sassaki FT, Sena JA, de Souza AA, Truffi D, Tsukumo F, Yanai GM, Zaros LG, Civerolo EL, Simpson AJ, Almeida NF Jr, Setubal JC, Kitajima JP.

J Bacteriol. 2003 Feb;185(3):1018-26.

16.

Comparison of the genomes of two Xanthomonas pathogens with differing host specificities.

da Silva AC, Ferro JA, Reinach FC, Farah CS, Furlan LR, Quaggio RB, Monteiro-Vitorello CB, Van Sluys MA, Almeida NF, Alves LM, do Amaral AM, Bertolini MC, Camargo LE, Camarotte G, Cannavan F, Cardozo J, Chambergo F, Ciapina LP, Cicarelli RM, Coutinho LL, Cursino-Santos JR, El-Dorry H, Faria JB, Ferreira AJ, Ferreira RC, Ferro MI, Formighieri EF, Franco MC, Greggio CC, Gruber A, Katsuyama AM, Kishi LT, Leite RP, Lemos EG, Lemos MV, Locali EC, Machado MA, Madeira AM, Martinez-Rossi NM, Martins EC, Meidanis J, Menck CF, Miyaki CY, Moon DH, Moreira LM, Novo MT, Okura VK, Oliveira MC, Oliveira VR, Pereira HA, Rossi A, Sena JA, Silva C, de Souza RF, Spinola LA, Takita MA, Tamura RE, Teixeira EC, Tezza RI, Trindade dos Santos M, Truffi D, Tsai SM, White FF, Setubal JC, Kitajima JP.

Nature. 2002 May 23;417(6887):459-63.

PMID:
12024217

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