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Items: 1 to 50 of 55

1.

SOBIR1/EVR prevents precocious initiation of fiber differentiation during wood development through a mechanism involving BP and ERECTA.

Milhinhos A, Vera-Sirera F, Blanco-Touriñán N, Mari-Carmona C, Carrió-Seguí À, Forment J, Champion C, Thamm A, Urbez C, Prescott H, Agustí J.

Proc Natl Acad Sci U S A. 2019 Sep 10;116(37):18710-18716. doi: 10.1073/pnas.1807863116. Epub 2019 Aug 23.

PMID:
31444299
2.

PthA4AT , a 7.5-repeats transcription activator-like (TAL) effector from Xanthomonas citri ssp. citri, triggers citrus canker resistance.

Roeschlin RA, Uviedo F, García L, Molina MC, Favaro MA, Chiesa MA, Tasselli S, Franco-Zorrilla JM, Forment J, Gadea J, Marano MR.

Mol Plant Pathol. 2019 Oct;20(10):1394-1407. doi: 10.1111/mpp.12844. Epub 2019 Jul 5.

3.

Derivation and maintenance of mouse haploid embryonic stem cells.

Elling U, Woods M, Forment JV, Fu B, Yang F, Ng BL, Vicente JR, Adams DJ, Doe B, Jackson SP, Penninger JM, Balmus G.

Nat Protoc. 2019 Jul;14(7):1991-2014. doi: 10.1038/s41596-019-0169-z. Epub 2019 Jun 3.

PMID:
31160788
4.

ATM orchestrates the DNA-damage response to counter toxic non-homologous end-joining at broken replication forks.

Balmus G, Pilger D, Coates J, Demir M, Sczaniecka-Clift M, Barros AC, Woods M, Fu B, Yang F, Chen E, Ostermaier M, Stankovic T, Ponstingl H, Herzog M, Yusa K, Martinez FM, Durant ST, Galanty Y, Beli P, Adams DJ, Bradley A, Metzakopian E, Forment JV, Jackson SP.

Nat Commun. 2019 Jan 8;10(1):87. doi: 10.1038/s41467-018-07729-2.

5.

XenofilteR: computational deconvolution of mouse and human reads in tumor xenograft sequence data.

Kluin RJC, Kemper K, Kuilman T, de Ruiter JR, Iyer V, Forment JV, Cornelissen-Steijger P, de Rink I, Ter Brugge P, Song JY, Klarenbeek S, McDermott U, Jonkers J, Velds A, Adams DJ, Peeper DS, Krijgsman O.

BMC Bioinformatics. 2018 Oct 4;19(1):366. doi: 10.1186/s12859-018-2353-5.

6.

Detection of functional protein domains by unbiased genome-wide forward genetic screening.

Herzog M, Puddu F, Coates J, Geisler N, Forment JV, Jackson SP.

Sci Rep. 2018 Apr 18;8(1):6161. doi: 10.1038/s41598-018-24400-4.

7.

Targeting the replication stress response in cancer.

Forment JV, O'Connor MJ.

Pharmacol Ther. 2018 Aug;188:155-167. doi: 10.1016/j.pharmthera.2018.03.005. Epub 2018 Mar 24. Review.

PMID:
29580942
8.

Synthetic lethality between androgen receptor signalling and the PARP pathway in prostate cancer.

Asim M, Tarish F, Zecchini HI, Sanjiv K, Gelali E, Massie CE, Baridi A, Warren AY, Zhao W, Ogris C, McDuffus LA, Mascalchi P, Shaw G, Dev H, Wadhwa K, Wijnhoven P, Forment JV, Lyons SR, Lynch AG, O'Neill C, Zecchini VR, Rennie PS, Baniahmad A, Tavaré S, Mills IG, Galanty Y, Crosetto N, Schultz N, Neal D, Helleday T.

Nat Commun. 2017 Aug 29;8(1):374. doi: 10.1038/s41467-017-00393-y.

9.

A synthetic biology approach for consistent production of plant-made recombinant polyclonal antibodies against snake venom toxins.

Julve Parreño JM, Huet E, Fernández-Del-Carmen A, Segura A, Venturi M, Gandía A, Pan WS, Albaladejo I, Forment J, Pla D, Wigdorovitz A, Calvete JJ, Gutiérrez C, Gutiérrez JM, Granell A, Orzáez D.

Plant Biotechnol J. 2018 Mar;16(3):727-736. doi: 10.1111/pbi.12823. Epub 2017 Sep 22.

10.

Nicotiana benthamiana plants asymptomatically infected by Pelargonium line pattern virus show unusually high accumulation of viral small RNAs that is neither associated with DCL induction nor RDR6 activity.

Pérez-Cañamás M, Blanco-Pérez M, Forment J, Hernández C.

Virology. 2017 Jan 15;501:136-146. doi: 10.1016/j.virol.2016.11.018. Epub 2016 Dec 2.

11.

Genome-wide genetic screening with chemically mutagenized haploid embryonic stem cells.

Forment JV, Herzog M, Coates J, Konopka T, Gapp BV, Nijman SM, Adams DJ, Keane TM, Jackson SP.

Nat Chem Biol. 2017 Jan;13(1):12-14. doi: 10.1038/nchembio.2226. Epub 2016 Oct 31.

12.

A genetic genomics-expression approach reveals components of the molecular mechanisms beyond the cell wall that underlie peach fruit woolliness due to cold storage.

Pons C, Martí C, Forment J, Crisosto CH, Dandekar AM, Granell A.

Plant Mol Biol. 2016 Nov;92(4-5):483-503. Epub 2016 Oct 6.

PMID:
27714490
13.

Characterization of a New Pink-Fruited Tomato Mutant Results in the Identification of a Null Allele of the SlMYB12 Transcription Factor.

Fernandez-Moreno JP, Tzfadia O, Forment J, Presa S, Rogachev I, Meir S, Orzaez D, Aharoni A, Granell A.

Plant Physiol. 2016 Jul;171(3):1821-36. doi: 10.1104/pp.16.00282. Epub 2016 May 6.

14.

When two is not enough: a CtIP tetramer is required for DNA repair by Homologous Recombination.

Forment JV, Jackson SP, Pellegrini L.

Nucleus. 2015;6(5):344-8. doi: 10.1080/19491034.2015.1086050.

15.

A flow cytometry-based method to simplify the analysis and quantification of protein association to chromatin in mammalian cells.

Forment JV, Jackson SP.

Nat Protoc. 2015 Sep;10(9):1297-307. doi: 10.1038/nprot.2015.066. Epub 2015 Jul 30.

16.

CtIP tetramer assembly is required for DNA-end resection and repair.

Davies OR, Forment JV, Sun M, Belotserkovskaya R, Coates J, Galanty Y, Demir M, Morton CR, Rzechorzek NJ, Jackson SP, Pellegrini L.

Nat Struct Mol Biol. 2015 Feb;22(2):150-157. doi: 10.1038/nsmb.2937. Epub 2015 Jan 5.

17.

Systematic characterization of deubiquitylating enzymes for roles in maintaining genome integrity.

Nishi R, Wijnhoven P, le Sage C, Tjeertes J, Galanty Y, Forment JV, Clague MJ, Urbé S, Jackson SP.

Nat Cell Biol. 2014 Oct;16(10):1016-26, 1-8. doi: 10.1038/ncb3028. Epub 2014 Sep 7.

18.

Tomato PYR/PYL/RCAR abscisic acid receptors show high expression in root, differential sensitivity to the abscisic acid agonist quinabactin, and the capability to enhance plant drought resistance.

González-Guzmán M, Rodríguez L, Lorenzo-Orts L, Pons C, Sarrión-Perdigones A, Fernández MA, Peirats-Llobet M, Forment J, Moreno-Alvero M, Cutler SR, Albert A, Granell A, Rodríguez PL.

J Exp Bot. 2014 Aug;65(15):4451-64. doi: 10.1093/jxb/eru219. Epub 2014 May 26.

19.

High-affinity glucose transport in Aspergillus nidulans is mediated by the products of two related but differentially expressed genes.

Forment JV, Flipphi M, Ventura L, González R, Ramón D, Maccabe AP.

PLoS One. 2014 Apr 21;9(4):e94662. doi: 10.1371/journal.pone.0094662. eCollection 2014.

20.

A bulk segregant gene expression analysis of a peach population reveals components of the underlying mechanism of the fruit cold response.

Pons C, Martí C, Forment J, Crisosto CH, Dandekar AM, Granell A.

PLoS One. 2014 Mar 5;9(3):e90706. doi: 10.1371/journal.pone.0090706. eCollection 2014.

21.

Shrinkage of genome size in a plant RNA virus upon transfer of an essential viral gene into the host genome.

Tromas N, Zwart MP, Forment J, Elena SF.

Genome Biol Evol. 2014 Mar;6(3):538-50. doi: 10.1093/gbe/evu036.

22.

Identification of transcription factors potentially involved in the juvenile to adult phase transition in Citrus.

Castillo MC, Forment J, Gadea J, Carrasco JL, Juarez J, Navarro L, Ancillo G.

Ann Bot. 2013 Nov;112(7):1371-81. doi: 10.1093/aob/mct211. Epub 2013 Sep 19.

23.

The transcriptome of Echinostoma caproni adults: further characterization of the secretome and identification of new potential drug targets.

Garg G, Bernal D, Trelis M, Forment J, Ortiz J, Valero ML, Pedrola L, Martinez-Blanch J, Esteban JG, Ranganathan S, Toledo R, Marcilla A.

J Proteomics. 2013 Aug 26;89:202-14. doi: 10.1016/j.jprot.2013.06.017. Epub 2013 Jun 21.

PMID:
23796492
24.

GoldenBraid 2.0: a comprehensive DNA assembly framework for plant synthetic biology.

Sarrion-Perdigones A, Vazquez-Vilar M, Palací J, Castelijns B, Forment J, Ziarsolo P, Blanca J, Granell A, Orzaez D.

Plant Physiol. 2013 Jul;162(3):1618-31.

25.

Disruption of mouse Cenpj, a regulator of centriole biogenesis, phenocopies Seckel syndrome.

McIntyre RE, Lakshminarasimhan Chavali P, Ismail O, Carragher DM, Sanchez-Andrade G, Forment JV, Fu B, Del Castillo Velasco-Herrera M, Edwards A, van der Weyden L, Yang F; Sanger Mouse Genetics Project, Ramirez-Solis R, Estabel J, Gallagher FA, Logan DW, Arends MJ, Tsang SH, Mahajan VB, Scudamore CL, White JK, Jackson SP, Gergely F, Adams DJ.

PLoS Genet. 2012;8(11):e1003022. doi: 10.1371/journal.pgen.1003022. Epub 2012 Nov 15.

26.

Chromothripsis and cancer: causes and consequences of chromosome shattering.

Forment JV, Kaidi A, Jackson SP.

Nat Rev Cancer. 2012 Oct;12(10):663-70. doi: 10.1038/nrc3352. Epub 2012 Sep 13. Review.

PMID:
22972457
27.

A high-throughput, flow cytometry-based method to quantify DNA-end resection in mammalian cells.

Forment JV, Walker RV, Jackson SP.

Cytometry A. 2012 Oct;81(10):922-8. doi: 10.1002/cyto.a.22155. Epub 2012 Aug 14.

28.

CDK targeting of NBS1 promotes DNA-end resection, replication restart and homologous recombination.

Falck J, Forment JV, Coates J, Mistrik M, Lukas J, Bartek J, Jackson SP.

EMBO Rep. 2012 Jun;13(6):561-8. doi: 10.1038/embor.2012.58.

29.

The transcriptome analysis of Strongyloides stercoralis L3i larvae reveals targets for intervention in a neglected disease.

Marcilla A, Garg G, Bernal D, Ranganathan S, Forment J, Ortiz J, Muñoz-Antolí C, Dominguez MV, Pedrola L, Martinez-Blanch J, Sotillo J, Trelis M, Toledo R, Esteban JG.

PLoS Negl Trop Dis. 2012;6(2):e1513. doi: 10.1371/journal.pntd.0001513. Epub 2012 Feb 28.

30.

Small-molecule-induced DNA damage identifies alternative DNA structures in human genes.

Rodriguez R, Miller KM, Forment JV, Bradshaw CR, Nikan M, Britton S, Oelschlaegel T, Xhemalce B, Balasubramanian S, Jackson SP.

Nat Chem Biol. 2012 Feb 5;8(3):301-10. doi: 10.1038/nchembio.780.

31.

Structure-specific DNA endonuclease Mus81/Eme1 generates DNA damage caused by Chk1 inactivation.

Forment JV, Blasius M, Guerini I, Jackson SP.

PLoS One. 2011;6(8):e23517. doi: 10.1371/journal.pone.0023517. Epub 2011 Aug 17.

32.

A phospho-proteomic screen identifies substrates of the checkpoint kinase Chk1.

Blasius M, Forment JV, Thakkar N, Wagner SA, Choudhary C, Jackson SP.

Genome Biol. 2011 Aug 18;12(8):R78. doi: 10.1186/gb-2011-12-8-r78.

33.

Transcriptomic profiling of citrus fruit peel tissues reveals fundamental effects of phenylpropanoids and ethylene on induced resistance.

Ballester AR, Lafuente MT, Forment J, Gadea J, De Vos RC, Bovy AG, González-Candelas L.

Mol Plant Pathol. 2011 Dec;12(9):879-97. doi: 10.1111/j.1364-3703.2011.00721.x. Epub 2011 May 12.

34.

High-throughput sequencing, characterization and detection of new and conserved cucumber miRNAs.

Martínez G, Forment J, Llave C, Pallás V, Gómez G.

PLoS One. 2011;6(5):e19523. doi: 10.1371/journal.pone.0019523. Epub 2011 May 16.

35.

Use of Saccharomyces cerevisiae and Caenorhabditis elegans as model organisms to study the effect of cocoa polyphenols in the resistance to oxidative stress.

Martorell P, Forment JV, de Llanos R, Montón F, Llopis S, González N, Genovés S, Cienfuegos E, Monzó H, Ramón D.

J Agric Food Chem. 2011 Mar 9;59(5):2077-85. doi: 10.1021/jf104217g. Epub 2011 Feb 2.

PMID:
21288028
36.

Concentration dependent effects of commonly used pesticides on activation versus inhibition of the quince (Cydonia Oblonga) polyphenol oxidase.

Fattouch S, Raboudi-Fattouch F, Ponce JV, Forment JV, Lukovic D, Marzouki N, Vidal DR.

Food Chem Toxicol. 2010 Mar;48(3):957-63. doi: 10.1016/j.fct.2010.01.006. Epub 2010 Jan 12.

PMID:
20060877
37.

A new set of ESTs and cDNA clones from full-length and normalized libraries for gene discovery and functional characterization in citrus.

Marques MC, Alonso-Cantabrana H, Forment J, Arribas R, Alamar S, Conejero V, Perez-Amador MA.

BMC Genomics. 2009 Sep 11;10:428. doi: 10.1186/1471-2164-10-428.

38.

Shared and novel molecular responses of mandarin to drought.

Gimeno J, Gadea J, Forment J, Pérez-Valle J, Santiago J, Martínez-Godoy MA, Yenush L, Bellés JM, Brumós J, Colmenero-Flores JM, Talón M, Serrano R.

Plant Mol Biol. 2009 Jul;70(4):403-20. doi: 10.1007/s11103-009-9481-2. Epub 2009 Mar 17.

PMID:
19290483
39.

Gene expression analysis in citrus reveals the role of gibberellins on photosynthesis and stress.

Huerta L, Forment J, Gadea J, Fagoaga C, Peña L, Pérez-Amador MA, García-Martínez JL.

Plant Cell Environ. 2008 Nov;31(11):1620-33. doi: 10.1111/j.1365-3040.2008.01870.x. Epub 2008 Aug 22.

40.

Development of ChillPeach genomic tools and identification of cold-responsive genes in peach fruit.

Ogundiwin EA, Martí C, Forment J, Pons C, Granell A, Gradziel TM, Peace CP, Crisosto CH.

Plant Mol Biol. 2008 Nov;68(4-5):379-97. doi: 10.1007/s11103-008-9378-5. Epub 2008 Jul 27.

PMID:
18661259
41.

A genome-wide 20 K citrus microarray for gene expression analysis.

Martinez-Godoy MA, Mauri N, Juarez J, Marques MC, Santiago J, Forment J, Gadea J.

BMC Genomics. 2008 Jul 3;9:318. doi: 10.1186/1471-2164-9-318.

42.

EST2uni: an open, parallel tool for automated EST analysis and database creation, with a data mining web interface and microarray expression data integration.

Forment J, Gilabert F, Robles A, Conejero V, Nuez F, Blanca JM.

BMC Bioinformatics. 2008 Jan 7;9:5. doi: 10.1186/1471-2105-9-5.

43.

Transcriptional response of Citrus aurantifolia to infection by Citrus tristeza virus.

Gandía M, Conesa A, Ancillo G, Gadea J, Forment J, Pallás V, Flores R, Duran-Vila N, Moreno P, Guerri J.

Virology. 2007 Oct 25;367(2):298-306. Epub 2007 Jul 9.

44.

Class prediction of closely related plant varieties using gene expression profiling.

Ancillo G, Gadea J, Forment J, Guerri J, Navarro L.

J Exp Bot. 2007;58(8):1927-33. Epub 2007 Apr 23.

PMID:
17452756
45.
46.

In silico predicted robustness of viroid RNA secondary structures. II. Interaction between mutation pairs.

Sanjuán R, Forment J, Elena SF.

Mol Biol Evol. 2006 Nov;23(11):2123-30. Epub 2006 Aug 10.

PMID:
16901984
47.

Global analysis of gene expression during development and ripening of citrus fruit flesh. A proposed mechanism for citric Acid utilization.

Cercós M, Soler G, Iglesias DJ, Gadea J, Forment J, Talón M.

Plant Mol Biol. 2006 Nov;62(4-5):513-27. Epub 2006 Aug 1.

PMID:
16897468
48.

Consecutive gene deletions in Aspergillus nidulans: application of the Cre/loxP system.

Forment JV, Ramón D, MacCabe AP.

Curr Genet. 2006 Sep;50(3):217-24. Epub 2006 Jun 17.

PMID:
16783565
49.

In silico predicted robustness of viroids RNA secondary structures. I. The effect of single mutations.

Sanjuán R, Forment J, Elena SF.

Mol Biol Evol. 2006 Jul;23(7):1427-36. Epub 2006 May 5.

PMID:
16679345
50.

Identification of the mstE gene encoding a glucose-inducible, low affinity glucose transporter in Aspergillus nidulans.

Forment JV, Flipphi M, Ramón D, Ventura L, Maccabe AP.

J Biol Chem. 2006 Mar 31;281(13):8339-46. Epub 2006 Jan 17.

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