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Items: 32

1.

Genome plasticity in Candida albicans is driven by long repeat sequences.

Todd RT, Wikoff TD, Forche A, Selmecki A.

Elife. 2019 Jun 7;8. pii: e45954. doi: 10.7554/eLife.45954. [Epub ahead of print]

2.

Selection of Candida albicans trisomy during oropharyngeal infection results in a commensal-like phenotype.

Forche A, Solis NV, Swidergall M, Thomas R, Guyer A, Beach A, Cromie GA, Le GT, Lowell E, Pavelka N, Berman J, Dudley AM, Selmecki A, Filler SG.

PLoS Genet. 2019 May 15;15(5):e1008137. doi: 10.1371/journal.pgen.1008137. eCollection 2019 May.

3.

Rapid Phenotypic and Genotypic Diversification After Exposure to the Oral Host Niche in Candida albicans.

Forche A, Cromie G, Gerstein AC, Solis NV, Pisithkul T, Srifa W, Jeffery E, Abbey D, Filler SG, Dudley AM, Berman J.

Genetics. 2018 Jul;209(3):725-741. doi: 10.1534/genetics.118.301019. Epub 2018 May 3.

PMID:
29724862
4.

Ploidy Variation in Fungi: Polyploidy, Aneuploidy, and Genome Evolution.

Todd RT, Forche A, Selmecki A.

Microbiol Spectr. 2017 Jul;5(4). doi: 10.1128/microbiolspec.FUNK-0051-2016. Review.

5.

Whole Genome Sequence of the Heterozygous Clinical Isolate Candida krusei 81-B-5.

Cuomo CA, Shea T, Yang B, Rao R, Forche A.

G3 (Bethesda). 2017 Sep 7;7(9):2883-2889. doi: 10.1534/g3.117.043547.

6.

Haplotyping a Non-meiotic Diploid Fungal Pathogen Using Induced Aneuploidies and SNP/CGH Microarray Analysis.

Berman J, Forche A.

Methods Mol Biol. 2017;1551:131-146. doi: 10.1007/978-1-4939-6750-6_7.

7.

Corrigendum: The 'obligate diploid' Candida albicans forms mating-competent haploids.

Hickman MA, Zeng G, Forche A, Hirakawa MP, Abbey D, Harrison BD, Wang YM, Su CH, Bennett RJ, Wang Y, Berman J.

Nature. 2016 Feb 11;530(7589):242. doi: 10.1038/nature16134. Epub 2015 Nov 18. No abstract available.

8.
9.

Microevolution of Candida albicans in macrophages restores filamentation in a nonfilamentous mutant.

Wartenberg A, Linde J, Martin R, Schreiner M, Horn F, Jacobsen ID, Jenull S, Wolf T, Kuchler K, Guthke R, Kurzai O, Forche A, d'Enfert C, Brunke S, Hube B.

PLoS Genet. 2014 Dec 4;10(12):e1004824. doi: 10.1371/journal.pgen.1004824. eCollection 2014 Dec.

10.

Rapid mechanisms for generating genome diversity: whole ploidy shifts, aneuploidy, and loss of heterozygosity.

Bennett RJ, Forche A, Berman J.

Cold Spring Harb Perspect Med. 2014 Jul 31;4(10). pii: a019604. doi: 10.1101/cshperspect.a019604. Review.

11.

The 'obligate diploid' Candida albicans forms mating-competent haploids.

Hickman MA, Zeng G, Forche A, Hirakawa MP, Abbey D, Harrison BD, Wang YM, Su CH, Bennett RJ, Wang Y, Berman J.

Nature. 2013 Feb 7;494(7435):55-9. doi: 10.1038/nature11865. Epub 2013 Jan 30. Erratum in: Nature. 2016 Feb 11;530(7589):242.

12.

Analysis of protein function in clinical C. albicans isolates.

Gerami-Nejad M, Forche A, McClellan M, Berman J.

Yeast. 2012 Aug;29(8):303-9. doi: 10.1002/yea.2910. Epub 2012 Jul 9.

13.

Stress alters rates and types of loss of heterozygosity in Candida albicans.

Forche A, Abbey D, Pisithkul T, Weinzierl MA, Ringstrom T, Bruck D, Petersen K, Berman J.

MBio. 2011 Jul 26;2(4). pii: e00129-11. doi: 10.1128/mBio.00129-11. Print 2011.

14.

Genomic plasticity of the human fungal pathogen Candida albicans.

Selmecki A, Forche A, Berman J.

Eukaryot Cell. 2010 Jul;9(7):991-1008. doi: 10.1128/EC.00060-10. Epub 2010 May 21. Review.

15.

Aneuploid chromosomes are highly unstable during DNA transformation of Candida albicans.

Bouchonville K, Forche A, Tang KE, Selmecki A, Berman J.

Eukaryot Cell. 2009 Oct;8(10):1554-66. doi: 10.1128/EC.00209-09. Epub 2009 Aug 21.

16.

Efficient and rapid identification of Candida albicans allelic status using SNP-RFLP.

Forche A, Steinbach M, Berman J.

FEMS Yeast Res. 2009 Oct;9(7):1061-9. doi: 10.1111/j.1567-1364.2009.00542.x. Epub 2009 Jun 22.

17.

Evolution of pathogenicity and sexual reproduction in eight Candida genomes.

Butler G, Rasmussen MD, Lin MF, Santos MA, Sakthikumar S, Munro CA, Rheinbay E, Grabherr M, Forche A, Reedy JL, Agrafioti I, Arnaud MB, Bates S, Brown AJ, Brunke S, Costanzo MC, Fitzpatrick DA, de Groot PW, Harris D, Hoyer LL, Hube B, Klis FM, Kodira C, Lennard N, Logue ME, Martin R, Neiman AM, Nikolaou E, Quail MA, Quinn J, Santos MC, Schmitzberger FF, Sherlock G, Shah P, Silverstein KA, Skrzypek MS, Soll D, Staggs R, Stansfield I, Stumpf MP, Sudbery PE, Srikantha T, Zeng Q, Berman J, Berriman M, Heitman J, Gow NA, Lorenz MC, Birren BW, Kellis M, Cuomo CA.

Nature. 2009 Jun 4;459(7247):657-62. doi: 10.1038/nature08064.

18.

Evolution in Candida albicans populations during a single passage through a mouse host.

Forche A, Magee PT, Selmecki A, Berman J, May G.

Genetics. 2009 Jul;182(3):799-811. doi: 10.1534/genetics.109.103325. Epub 2009 May 4.

19.

The parasexual cycle in Candida albicans provides an alternative pathway to meiosis for the formation of recombinant strains.

Forche A, Alby K, Schaefer D, Johnson AD, Berman J, Bennett RJ.

PLoS Biol. 2008 May 6;6(5):e110. doi: 10.1371/journal.pbio.0060110.

20.

An isochromosome confers drug resistance in vivo by amplification of two genes, ERG11 and TAC1.

Selmecki A, Gerami-Nejad M, Paulson C, Forche A, Berman J.

Mol Microbiol. 2008 May;68(3):624-41. doi: 10.1111/j.1365-2958.2008.06176.x. Epub 2008 Mar 20.

21.

Haplotype mapping of a diploid non-meiotic organism using existing and induced aneuploidies.

Legrand M, Forche A, Selmecki A, Chan C, Kirkpatrick DT, Berman J.

PLoS Genet. 2008 Jan;4(1):e1. doi: 10.1371/journal.pgen.0040001. Epub 2007 Nov 20.

22.

Genotypic evolution of azole resistance mechanisms in sequential Candida albicans isolates.

Coste A, Selmecki A, Forche A, Diogo D, Bougnoux ME, d'Enfert C, Berman J, Sanglard D.

Eukaryot Cell. 2007 Oct;6(10):1889-904. Epub 2007 Aug 10.

23.

Aneuploidy and isochromosome formation in drug-resistant Candida albicans.

Selmecki A, Forche A, Berman J.

Science. 2006 Jul 21;313(5785):367-70.

24.

A mutation in Tac1p, a transcription factor regulating CDR1 and CDR2, is coupled with loss of heterozygosity at chromosome 5 to mediate antifungal resistance in Candida albicans.

Coste A, Turner V, Ischer F, Morschhäuser J, Forche A, Selmecki A, Berman J, Bille J, Sanglard D.

Genetics. 2006 Apr;172(4):2139-56. Epub 2006 Feb 1.

26.

Genome-wide single-nucleotide polymorphism map for Candida albicans.

Forche A, Magee PT, Magee BB, May G.

Eukaryot Cell. 2004 Jun;3(3):705-14.

27.

Homozygosity at the MTL locus in clinical strains of Candida albicans: karyotypic rearrangements and tetraploid formation.

Legrand M, Lephart P, Forche A, Mueller FM, Walsh T, Magee PT, Magee BB.

Mol Microbiol. 2004 Jun;52(5):1451-62.

28.

A system for studying genetic changes in Candida albicans during infection.

Forche A, May G, Beckerman J, Kauffman S, Becker J, Magee PT.

Fungal Genet Biol. 2003 Jun;39(1):38-50.

PMID:
12742062
29.

[Genetic structure of geographically different populations of candida albicans].

Schönian G, Forche A, Tietz HJ, Müller M, Gräser Y, Vilgalys R, Mitchell TG, Presber W.

Mycoses. 2000;43 Suppl 2:51-6. German.

PMID:
11291578
30.
31.

Assessment of genetic relatedness of vaginal isolates of Candida albicans from different geographical origins.

Pinto de Andrade M, Schönian G, Forche A, Rosado L, Costa I, Müller M, Presber W, Mitchell TG, Tietz HJ.

Int J Med Microbiol. 2000 Mar;290(1):97-104.

PMID:
11043986
32.

Genetic structure of typical and atypical populations of Candida albicans from Africa.

Forche A, Schönian G, Gräser Y, Vilgalys R, Mitchell TG.

Fungal Genet Biol. 1999 Nov;28(2):107-25.

PMID:
10587473

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