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Characterizing species interactions that contribute to biofilm formation in a multispecies model of a potable water bacterial community.

Thompson AF, English EL, Nock AM, Willsey GG, Eckstrom K, Cairns B, Bavelock M, Tighe SW, Foote A, Shulman H, Pericleous A, Gupta S, Kadouri DE, Wargo MJ.

Microbiology. 2019 Oct 4. doi: 10.1099/mic.0.000849. [Epub ahead of print]


Metabolomics Profile and Targeted Lipidomics in Multiple Tissues Associated with Feed Efficiency in Beef Steers.

Artegoitia VM, Foote AP, Lewis RM, Freetly HC.

ACS Omega. 2019 Feb 22;4(2):3973-3982. doi: 10.1021/acsomega.8b02494. eCollection 2019 Feb 28.


Efficacy of a solar concentrator to Inactivate E. coli and C. perfringens spores in latrine waste in Kenya.

Murphy JL, Ayers T, Foote A, Woods E, Wamola N, Fagerli K, Waiboci L, Mugoh R, Mintz ED, Zhao K, Marano N, O'Reilly CE, Hill VR.

Sci Total Environ. 2019 Nov 15;691:401-406. doi: 10.1016/j.scitotenv.2019.07.019. Epub 2019 Jul 2.


Admixture between ancient lineages, selection, and the formation of sympatric stickleback species-pairs.

Dean LL, Magalhaes IS, Foote A, D'Agostino D, McGowan S, MacColl ADC.

Mol Biol Evol. 2019 Jul 12. pii: msz161. doi: 10.1093/molbev/msz161. [Epub ahead of print]


Postglacial Colonization of Northern Coastal Habitat by Bottlenose Dolphins: A Marine Leading-Edge Expansion?

Nykänen M, Kaschner K, Dabin W, Brownlow A, Davison NJ, Deaville R, Garilao C, Kesner-Reyes K, Gilbert MTP, Penrose R, Islas-Villanueva V, Wales N, Ingram SN, Rogan E, Louis M, Foote AD.

J Hered. 2019 Oct 10;110(6):662-674. doi: 10.1093/jhered/esz039.


Killer whale genomes reveal a complex history of recurrent admixture and vicariance.

Foote AD, Martin MD, Louis M, Pacheco G, Robertson KM, Sinding MS, Amaral AR, Baird RW, Baker CS, Ballance L, Barlow J, Brownlow A, Collins T, Constantine R, Dabin W, Dalla Rosa L, Davison NJ, Durban JW, Esteban R, Ferguson SH, Gerrodette T, Guinet C, Hanson MB, Hoggard W, Matthews CJD, Samarra FIP, de Stephanis R, Tavares SB, Tixier P, Totterdell JA, Wade P, Excoffier L, Gilbert MTP, Wolf JBW, Morin PA.

Mol Ecol. 2019 Jul;28(14):3427-3444. doi: 10.1111/mec.15099. Epub 2019 May 27.


What is the digestibility and caloric value of different botanical parts in corn residue to cattle?1.

Petzel EA, Titgemeyer EC, Smart AJ, Hales KE, Foote AP, Acharya S, Bailey EA, Held JE, Brake DW.

J Anim Sci. 2019 Jul 2;97(7):3056-3070. doi: 10.1093/jas/skz137.


Tissue specific human fibroblast differential expression based on RNAsequencing analysis.

Foote AG, Wang Z, Kendziorski C, Thibeault SL.

BMC Genomics. 2019 Apr 23;20(1):308. doi: 10.1186/s12864-019-5682-5.


Impact of patient information leaflets on doctor-patient communication in the context of acute conditions: a prospective, controlled, before-after study in two French emergency departments.

Sustersic M, Tissot M, Tyrant J, Gauchet A, Foote A, Vermorel C, Bosson JL.

BMJ Open. 2019 Feb 20;9(2):e024184. doi: 10.1136/bmjopen-2018-024184.


Pseudomonas meningoencephalitis masquerading as a stroke in a patient on tocilizumab.

Williams CJ, Foote A, Choi P.

BMJ Case Rep. 2019 Jan 28;12(1). pii: bcr-2018-227296. doi: 10.1136/bcr-2018-227296.


Cross-species genomic landscape comparison of human mucosal melanoma with canine oral and equine melanoma.

Wong K, van der Weyden L, Schott CR, Foote A, Constantino-Casas F, Smith S, Dobson JM, Murchison EP, Wu H, Yeh I, Fullen DR, Joseph N, Bastian BC, Patel RM, Martincorena I, Robles-Espinoza CD, Iyer V, Kuijjer ML, Arends MJ, Brenn T, Harms PW, Wood GA, Adams DJ.

Nat Commun. 2019 Jan 21;10(1):353. doi: 10.1038/s41467-018-08081-1.


Time-resolved multirotational dynamics of single solution-phase tau proteins reveals details of conformational variation.

Foote AK, Manger LH, Holden MR, Margittai M, Goldsmith RH.

Phys Chem Chem Phys. 2019 Jan 23;21(4):1863-1871. doi: 10.1039/c8cp06971a.


Detection of equine coronavirus in horses in the United Kingdom.

Bryan J, Marr CM, Mackenzie CJ, Mair TS, Fletcher A, Cash R, Phillips M, Pusterla N, Mapes S, Foote AK.

Vet Rec. 2019 Jan 26;184(4):123. doi: 10.1136/vr.105098. Epub 2018 Dec 7. No abstract available.


Extradural spinal hydatid cyst causing hindlimb ataxia in a horse.

Peter V, Marr C, Foote A, Auer H, Head M.

Schweiz Arch Tierheilkd. 2018 Nov;160(11):659-664. doi: 10.17236/sat00183.


Quantifying dispersal between marine protected areas by a highly mobile species, the bottlenose dolphin, Tursiops truncatus.

Nykänen M, Dillane E, Englund A, Foote AD, Ingram SN, Louis M, Mirimin L, Oudejans M, Rogan E.

Ecol Evol. 2018 Aug 23;8(18):9241-9258. doi: 10.1002/ece3.4343. eCollection 2018 Sep.


Evaluation of baseline haemolymph biochemistry, volume and total body energetics to determine an accurate condition index in the black tiger shrimp, Penaeus monodon.

Berry SE, Simon CJ, Foote AR, Jerry DR, Wade NM.

Comp Biochem Physiol B Biochem Mol Biol. 2019 Feb;228:1-9. doi: 10.1016/j.cbpb.2018.10.003. Epub 2018 Oct 24.


Host-derived population genomics data provides insights into bacterial and diatom composition of the killer whale skin.

Hooper R, Brealey JC, van der Valk T, Alberdi A, Durban JW, Fearnbach H, Robertson KM, Baird RW, Bradley Hanson M, Wade P, Gilbert MTP, Morin PA, Wolf JBW, Foote AD, Guschanski K.

Mol Ecol. 2019 Jan;28(2):484-502. doi: 10.1111/mec.14860. Epub 2018 Oct 24.


Contingency management intervention targeting co-addiction of alcohol and drugs among American Indian adults: Design, methodology, and baseline data.

Burduli E, Skalisky J, Hirchak K, Orr MF, Foote A, Granbois A, Ries R, Roll JM, Buchwald D, McDonell MG, McPherson SM.

Clin Trials. 2018 Dec;15(6):587-599. doi: 10.1177/1740774518796151. Epub 2018 Aug 29.


Energy balance affects pulsatile secretion of luteinizing hormone from the adenohypophesis and expression of neurokinin B in the hypothalamus of ovariectomized gilts.

Thorson JF, Prezotto LD, Adams H, Petersen SL, Clapper JA, Wright EC, Oliver WT, Freking BA, Foote AP, Berry ED, Nonneman DJ, Lents CA.

Biol Reprod. 2018 Aug 1;99(2):433-445. doi: 10.1093/biolre/ioy069.


The effects of Capn1 gene inactivation on the differential expression of genes in skeletal muscle.

Oliver WT, Keel BN, Lindholm-Perry AK, Horodyska J, Foote AP.

Gene. 2018 Aug 20;668:54-58. doi: 10.1016/j.gene.2018.05.040. Epub 2018 May 25.


Evolution on the backbone: Apocynaceae phylogenomics and new perspectives on growth forms, flowers, and fruits.

Fishbein M, Livshultz T, Straub SCK, Simões AO, Boutte J, McDonnell A, Foote A.

Am J Bot. 2018 Mar;105(3):495-513. doi: 10.1002/ajb2.1067. Epub 2018 May 7.


Demography or selection on linked cultural traits or genes? Investigating the driver of low mtDNA diversity in the sperm whale using complementary mitochondrial and nuclear genome analyses.

Morin PA, Foote AD, Baker CS, Hancock-Hanser BL, Kaschner K, Mate BR, Mesnick SL, Pease VL, Rosel PE, Alexander A.

Mol Ecol. 2018 Jun;27(11):2604-2619. doi: 10.1111/mec.14698. Epub 2018 May 17.


Association of neutrophil morphology with bacterial isolates in equine tracheal wash samples.

Jocelyn NA, Wylie CE, Lean M, Barrelet A, Foote AK.

Equine Vet J. 2018 Nov;50(6):752-758. doi: 10.1111/evj.12837. Epub 2018 Apr 17.


Advancing Transcranial Magnetic Stimulation Methods for Complex Regional Pain Syndrome: An Open-Label Study of Paired Theta Burst and High-Frequency Stimulation.

Gaertner M, Kong JT, Scherrer KH, Foote A, Mackey S, Johnson KA.

Neuromodulation. 2018 Jun;21(4):409-416. doi: 10.1111/ner.12760. Epub 2018 Mar 4.


A scale assessing doctor-patient communication in a context of acute conditions based on a systematic review.

Sustersic M, Gauchet A, Kernou A, Gibert C, Foote A, Vermorel C, Bosson JL.

PLoS One. 2018 Feb 21;13(2):e0192306. doi: 10.1371/journal.pone.0192306. eCollection 2018. Review.


The Australian Mid-West Coastal Marine Wound Infections Study.

Foote A, Henderson R, Lindberg A, Grigg C, Greenfield C, Kirke AB, Auret K.

Aust Fam Physician. 2017 Dec;46(12):923-927.


Pain catastrophizing mediates the relationship between trait happiness and depressive symptoms in individuals with current pain.

Tran P, Sturgeon JA, Nilakantan A, Foote A, Mackey S, Johnson K.

J Appl Biobehav Res. 2017 Dec;22(4). pii: e12069. doi: 10.1111/jabr.12069. Epub 2017 Apr 18.


Comparison of the Hemostatic Efficacy of Pathogen-Reduced Platelets vs Untreated Platelets in Patients With Thrombocytopenia and Malignant Hematologic Diseases: A Randomized Clinical Trial.

Garban F, Guyard A, Labussière H, Bulabois CE, Marchand T, Mounier C, Caillot D, Bay JO, Coiteux V, Schmidt-Tanguy A, Le Niger C, Robin C, Ladaique P, Lapusan S, Deconinck E, Rolland C, Foote AM, François A, Jacquot C, Tardivel R, Tiberghien P, Bosson JL; Evaluation of the Efficacy of Platelets Treated With Pathogen Reduction Process (EFFIPAP) Study Group.

JAMA Oncol. 2018 Apr 1;4(4):468-475. doi: 10.1001/jamaoncol.2017.5123.


Association of preweaning and weaning serum cortisol and metabolites with ADG and incidence of respiratory disease in beef cattle.

Foote AP, Jones SA, Kuehn LA.

J Anim Sci. 2017 Nov;95(11):5012-5019. doi: 10.2527/jas2017.1783.


Correction: Sanitation practices and perceptions in Kakuma refugee camp, Kenya: Comparing the status quo with a novel service-based approach.

Nyoka R, Foote AM, Woods E, Lokey H, O'Reilly CE, Magumba F, Okello P, Mintz ED, Marano N, Morris JF.

PLoS One. 2017 Dec 19;12(12):e0190129. doi: 10.1371/journal.pone.0190129. eCollection 2017.


SNP Discovery from Single and Multiplex Genome Assemblies of Non-model Organisms.

Morin PA, Foote AD, Hill CM, Simon-Bouhet B, Lang AR, Louis M.

Methods Mol Biol. 2018;1712:113-144. doi: 10.1007/978-1-4939-7514-3_9.


Equine renal hemangiosarcoma: clinical presentation, pathologic features, and pSTAT3 expression.

Hughes K, Scott VHL, Blanck M, Barnett TP, Spanner Kristiansen J, Foote AK.

J Vet Diagn Invest. 2018 Mar;30(2):268-274. doi: 10.1177/1040638717745575. Epub 2017 Dec 3.


Sympatric Speciation in the Genomic Era.

Foote AD.

Trends Ecol Evol. 2018 Feb;33(2):85-95. doi: 10.1016/j.tree.2017.11.003. Epub 2017 Nov 30.


Endocannabinoid concentrations in plasma during the finishing period are associated with feed efficiency and carcass composition of beef cattle.

Artegoitia VM, Foote AP, Tait RG, Kuehn LA, Lewis RM, Wheeler TL, Freetly HC.

J Anim Sci. 2017 Oct;95(10):4568-4574. doi: 10.2527/jas2017.1629.


Beef steers with average dry matter intake and divergent average daily gain have altered gene expression in the jejunum.

Foote AP, Keel BN, Zarek CM, Lindholm-Perry AK.

J Anim Sci. 2017 Oct;95(10):4430-4439. doi: 10.2527/jas2017.1804.


Combination of obstructive sleep apnoea and insomnia treated by continuous positive airway pressure with the SensAwake pressure relief technology to assist sleep: a randomised cross-over trial protocol.

Pepin JL, Gagnadoux F, Foote A, Vicars R, Ogra B, Viot-Blanc V, Benmerad M, D'Ortho MP, Tamisier R.

BMJ Open. 2017 Oct 27;7(10):e015836. doi: 10.1136/bmjopen-2017-015836.


Revealing Conformational Variants of Solution-Phase Intrinsically Disordered Tau Protein at the Single-Molecule Level.

Manger LH, Foote AK, Wood SL, Holden MR, Heylman KD, Margittai M, Goldsmith RH.

Angew Chem Int Ed Engl. 2017 Dec 4;56(49):15584-15588. doi: 10.1002/anie.201708242. Epub 2017 Nov 14.


Cell density, dimethylsulfoxide concentration and needle gauge affect hydrogel-induced bone marrow mesenchymal stromal cell viability.

Chen X, Foote AG, Thibeault SL.

Cytotherapy. 2017 Dec;19(12):1522-1528. doi: 10.1016/j.jcyt.2017.08.016. Epub 2017 Oct 3.


Legal and Ethical Challenges in Emergency Psychiatry, Part 2: Management of Inmates.

Foote A, Ostermeyer B.

Psychiatr Clin North Am. 2017 Sep;40(3):555-564. doi: 10.1016/j.psc.2017.05.004. Epub 2017 Jun 15. Review.


Effects of zilpaterol hydrochloride on methane production, total body oxygen consumption, and blood metabolites in finishing beef steers.

Hales KE, Foote AP, Brake DW, Brown-Brandl TM, Artegoitia VM, Freetly HC.

J Anim Sci. 2017 Jul;95(7):3192-3197. doi: 10.2527/jas.2017.1527.


Comparative Gut Physiology Symposium: The Microbe-Gut-Brain Axis.

Foote AP.

J Anim Sci. 2017 Jul;95(7):3214. doi: 10.2527/jas.2017.1671. No abstract available.


Sanitation practices and perceptions in Kakuma refugee camp, Kenya: Comparing the status quo with a novel service-based approach.

Nyoka R, Foote AM, Woods E, Lokey H, O'Reilly CE, Magumba F, Okello P, Mintz ED, Marano N, Morris JF.

PLoS One. 2017 Jul 13;12(7):e0180864. doi: 10.1371/journal.pone.0180864. eCollection 2017. Erratum in: PLoS One. 2017 Dec 19;12 (12 ):e0190129.


Rumen Fluid Metabolomics Analysis Associated with Feed Efficiency on Crossbred Steers.

Artegoitia VM, Foote AP, Lewis RM, Freetly HC.

Sci Rep. 2017 Jun 6;7(1):2864. doi: 10.1038/s41598-017-02856-0.


Relationships between the genes expressed in the mesenteric adipose tissue of beef cattle and feed intake and gain.

Lindholm-Perry AK, Cunningham HC, Kuehn LA, Vallet JL, Keele JW, Foote AP, Cammack KM, Freetly HC.

Anim Genet. 2017 Aug;48(4):386-394. doi: 10.1111/age.12565. Epub 2017 May 31.


The effects of feeding increasing concentrations of corn oil on energy metabolism and nutrient balance in finishing beef steers.

Hales KE, Foote AP, Brown-Brandl TM, Freetly HC.

J Anim Sci. 2017 Feb;95(2):939-948. doi: 10.2527/jas.2016.0902.


Effect of abomasal butyrate infusion on gene expression in the duodenum of lambs.

Foote AP, Zarek CM, Kuehn LA, Cunningham HC, Cammack KM, Freetly HC, Lindholm-Perry AK.

J Anim Sci. 2017 Mar;95(3):1191-1196. doi: 10.2527/jas.2016.1022.


Relationships between inflammation- and immunity-related transcript abundance in the rumen and jejunum of beef steers with divergent average daily gain.

Reynolds JG, Foote AP, Freetly HC, Oliver WT, Lindholm-Perry AK.

Anim Genet. 2017 Aug;48(4):447-449. doi: 10.1111/age.12546. Epub 2017 Feb 21.


Wnt7a Inhibits IL-1β Induced Catabolic Gene Expression and Prevents Articular Cartilage Damage in Experimental Osteoarthritis.

Gibson AL, Hui Mingalone CK, Foote AT, Uchimura T, Zhang M, Zeng L.

Sci Rep. 2017 Feb 6;7:41823. doi: 10.1038/srep41823.


Endocannabinoids concentrations in plasma associated with feed efficiency and carcass composition of beef steers.

Artegoitia VM, Foote AP, Lewis RM, King DA, Shackelford SD, Wheeler TL, Freetly HC.

J Anim Sci. 2016 Dec;94(12):5177-5181. doi: 10.2527/jas.2016-1025.


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