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Items: 47

1.

Developmental trajectories of neuroanatomical alterations associated with the 16p11.2 Copy Number Variations.

Cárdenas-de-la-Parra A, Martin-Brevet S, Moreau C, Rodriguez-Herreros B, Fonov VS, Maillard AM, Zürcher NR; 16p11.2 European Consortium, Hadjikhani N, Beckmann JS, Reymond A, Draganski B, Jacquemont S, Collins DL.

Neuroimage. 2019 Dec;203:116155. doi: 10.1016/j.neuroimage.2019.116155. Epub 2019 Sep 5.

PMID:
31494251
2.

Cortical and subcortical T1 white/gray contrast, chronological age, and cognitive performance.

Lewis JD, Fonov VS, Collins DL, Evans AC, Tohka J; Brain Development Cooperative Group and the Pediatric Imaging, Neurocognition, and Genetics Study.

Neuroimage. 2019 Aug 1;196:276-288. doi: 10.1016/j.neuroimage.2019.04.022. Epub 2019 Apr 12.

PMID:
30986501
3.

Benchmark on Automatic 6-month-old Infant Brain Segmentation Algorithms: The iSeg-2017 Challenge.

Wang L, Nie D, Li G, Puybareau E, Dolz J, Zhang Q, Wang F, Xia J, Wu Z, Chen J, Thung KH, Bui TD, Shin J, Zeng G, Zheng G, Fonov VS, Doyle A, Xu Y, Moeskops P, Pluim JPW, Desrosiers C, Ayed IB, Sanroma G, Benkarim OM, Casamitjana A, Vilaplana V, Lin W, Li G, Shen D.

IEEE Trans Med Imaging. 2019 Feb 27. doi: 10.1109/TMI.2019.2901712. [Epub ahead of print]

PMID:
30835215
4.

Age-specific associations between oestradiol, cortico-amygdalar structural covariance, and verbal and spatial skills.

Nguyen TV, Jones SL, Gower T, Lew J, Albaugh MD, Botteron KN, Hudziak JJ, Fonov VS, Louis Collins D, Campbell BC, Booij L, Herba CM, Monnier P, Ducharme S, Waber D, McCracken JT.

J Neuroendocrinol. 2019 Apr;31(4):e12698. doi: 10.1111/jne.12698. Epub 2019 Mar 13.

PMID:
30776161
5.

The Canadian Dementia Imaging Protocol: Harmonizing National Cohorts.

Duchesne S, Chouinard I, Potvin O, Fonov VS, Khademi A, Bartha R, Bellec P, Collins DL, Descoteaux M, Hoge R, McCreary CR, Ramirez J, Scott CJM, Smith EE, Strother SC, Black SE; CIMA-Q group and the CCNA group.

J Magn Reson Imaging. 2019 Feb;49(2):456-465. doi: 10.1002/jmri.26197. Epub 2018 Sep 17.

PMID:
30635988
6.

Unbiased age-specific structural brain atlases for Chinese pediatric population.

Zhao T, Liao X, Fonov VS, Wang Q, Men W, Wang Y, Qin S, Tan S, Gao JH, Evans A, Tao S, Dong Q, He Y.

Neuroimage. 2019 Apr 1;189:55-70. doi: 10.1016/j.neuroimage.2019.01.006. Epub 2019 Jan 6.

PMID:
30625395
7.

Comparing fully automated state-of-the-art cerebellum parcellation from magnetic resonance images.

Carass A, Cuzzocreo JL, Han S, Hernandez-Castillo CR, Rasser PE, Ganz M, Beliveau V, Dolz J, Ben Ayed I, Desrosiers C, Thyreau B, Romero JE, Coupé P, Manjón JV, Fonov VS, Collins DL, Ying SH, Onyike CU, Crocetti D, Landman BA, Mostofsky SH, Thompson PM, Prince JL.

Neuroimage. 2018 Dec;183:150-172. doi: 10.1016/j.neuroimage.2018.08.003. Epub 2018 Aug 9.

8.

The EADC-ADNI harmonized protocol for hippocampal segmentation: A validation study.

Zandifar A, Fonov VS, Pruessner JC, Collins DL; Alzheimer's Disease Neuroimaging Initiative.

Neuroimage. 2018 Nov 1;181:142-148. doi: 10.1016/j.neuroimage.2018.06.077. Epub 2018 Jun 30.

PMID:
29966720
9.

White matter degeneration profile in the cognitive cortico-subcortical tracts in Parkinson's disease.

Hanganu A, Houde JC, Fonov VS, Degroot C, Mejia-Constain B, Lafontaine AL, Soland V, Chouinard S, Collins LD, Descoteaux M, Monchi O.

Mov Disord. 2018 Jul;33(7):1139-1150. doi: 10.1002/mds.27364. Epub 2018 Apr 23.

PMID:
29683523
10.

A comparison of publicly available linear MRI stereotaxic registration techniques.

Dadar M, Fonov VS, Collins DL; Alzheimer’s Disease Neuroimaging Initiative.

Neuroimage. 2018 Jul 1;174:191-200. doi: 10.1016/j.neuroimage.2018.03.025. Epub 2018 Mar 13.

PMID:
29548850
11.

Network connectivity determines cortical thinning in early Parkinson's disease progression.

Yau Y, Zeighami Y, Baker TE, Larcher K, Vainik U, Dadar M, Fonov VS, Hagmann P, Griffa A, Mišić B, Collins DL, Dagher A.

Nat Commun. 2018 Jan 2;9(1):12. doi: 10.1038/s41467-017-02416-0.

12.

Multimodal Imaging in Rat Model Recapitulates Alzheimer's Disease Biomarkers Abnormalities.

Parent MJ, Zimmer ER, Shin M, Kang MS, Fonov VS, Mathieu A, Aliaga A, Kostikov A, Do Carmo S, Dea D, Poirier J, Soucy JP, Gauthier S, Cuello AC, Rosa-Neto P.

J Neurosci. 2017 Dec 13;37(50):12263-12271. doi: 10.1523/JNEUROSCI.1346-17.2017. Epub 2017 Nov 2.

13.

PAM50: Unbiased multimodal template of the brainstem and spinal cord aligned with the ICBM152 space.

De Leener B, Fonov VS, Collins DL, Callot V, Stikov N, Cohen-Adad J.

Neuroimage. 2018 Jan 15;165:170-179. doi: 10.1016/j.neuroimage.2017.10.041. Epub 2017 Oct 21.

PMID:
29061527
14.

Dehydroepiandrosterone impacts working memory by shaping cortico-hippocampal structural covariance during development.

Nguyen TV, Wu M, Lew J, Albaugh MD, Botteron KN, Hudziak JJ, Fonov VS, Collins DL, Campbell BC, Booij L, Herba C, Monnier P, Ducharme S, McCracken JT.

Psychoneuroendocrinology. 2017 Dec;86:110-121. doi: 10.1016/j.psyneuen.2017.09.013. Epub 2017 Sep 15.

15.

Identifying incipient dementia individuals using machine learning and amyloid imaging.

Mathotaarachchi S, Pascoal TA, Shin M, Benedet AL, Kang MS, Beaudry T, Fonov VS, Gauthier S, Rosa-Neto P; Alzheimer's Disease Neuroimaging Initiative.

Neurobiol Aging. 2017 Nov;59:80-90. doi: 10.1016/j.neurobiolaging.2017.06.027. Epub 2017 Jul 11.

16.

Performance comparison of 10 different classification techniques in segmenting white matter hyperintensities in aging.

Dadar M, Maranzano J, Misquitta K, Anor CJ, Fonov VS, Tartaglia MC, Carmichael OT, Decarli C, Collins DL; Alzheimer's Disease Neuroimaging Initiative.

Neuroimage. 2017 Aug 15;157:233-249. doi: 10.1016/j.neuroimage.2017.06.009. Epub 2017 Jul 3.

17.

Validation of a Regression Technique for Segmentation of White Matter Hyperintensities in Alzheimer's Disease.

Dadar M, Pascoal TA, Manitsirikul S, Misquitta K, Fonov VS, Tartaglia MC, Breitner J, Rosa-Neto P, Carmichael OT, Decarli C, Collins DL.

IEEE Trans Med Imaging. 2017 Aug;36(8):1758-1768. doi: 10.1109/TMI.2017.2693978. Epub 2017 Apr 12.

PMID:
28422655
18.

Increased Extra-axial Cerebrospinal Fluid in High-Risk Infants Who Later Develop Autism.

Shen MD, Kim SH, McKinstry RC, Gu H, Hazlett HC, Nordahl CW, Emerson RW, Shaw D, Elison JT, Swanson MR, Fonov VS, Gerig G, Dager SR, Botteron KN, Paterson S, Schultz RT, Evans AC, Estes AM, Zwaigenbaum L, Styner MA, Amaral DG, Piven J, Hazlett HC, Chappell C, Dager S, Estes A, Shaw D, Botteron K, McKinstry R, Constantino J, Pruett J, Schultz R, Zwaigenbaum L, Elison J, Evans AC, Collins DL, Pike GB, Fonov V, Kostopoulos P, Das S, Gerig G, Styner M, Gu H, Piven J; Infant Brain Imaging Study Network.

Biol Psychiatry. 2017 Aug 1;82(3):186-193. doi: 10.1016/j.biopsych.2017.02.1095. Epub 2017 Mar 6.

19.

Monophasic demyelination reduces brain growth in children.

Aubert-Broche B, Weier K, Longoni G, Fonov VS, Bar-Or A, Marrie RA, Yeh EA, Narayanan S, Arnold DL, Verhey LH, Banwell B, Collins DL; Canadian Pediatric Demyelinating Disease Network.

Neurology. 2017 May 2;88(18):1744-1750. doi: 10.1212/WNL.0000000000003884. Epub 2017 Apr 5.

20.

Early brain development in infants at high risk for autism spectrum disorder.

Hazlett HC, Gu H, Munsell BC, Kim SH, Styner M, Wolff JJ, Elison JT, Swanson MR, Zhu H, Botteron KN, Collins DL, Constantino JN, Dager SR, Estes AM, Evans AC, Fonov VS, Gerig G, Kostopoulos P, McKinstry RC, Pandey J, Paterson S, Pruett JR, Schultz RT, Shaw DW, Zwaigenbaum L, Piven J; IBIS Network; Clinical Sites; Data Coordinating Center; Image Processing Core; Statistical Analysis.

Nature. 2017 Feb 15;542(7641):348-351. doi: 10.1038/nature21369.

21.

Cyberinfrastructure for Open Science at the Montreal Neurological Institute.

Das S, Glatard T, Rogers C, Saigle J, Paiva S, MacIntyre L, Safi-Harab M, Rousseau ME, Stirling J, Khalili-Mahani N, MacFarlane D, Kostopoulos P, Rioux P, Madjar C, Lecours-Boucher X, Vanamala S, Adalat R, Mohaddes Z, Fonov VS, Milot S, Leppert I, Degroot C, Durcan TM, Campbell T, Moreau J, Dagher A, Collins DL, Karamchandani J, Bar-Or A, Fon EA, Hoge R, Baillet S, Rouleau G, Evans AC.

Front Neuroinform. 2017 Jan 6;10:53. doi: 10.3389/fninf.2016.00053. eCollection 2016.

22.

Sex-specific associations of testosterone with prefrontal-hippocampal development and executive function.

Nguyen TV, Lew J, Albaugh MD, Botteron KN, Hudziak JJ, Fonov VS, Collins DL, Ducharme S, McCracken JT.

Psychoneuroendocrinology. 2017 Feb;76:206-217. doi: 10.1016/j.psyneuen.2016.12.005. Epub 2016 Dec 8.

23.

SCT: Spinal Cord Toolbox, an open-source software for processing spinal cord MRI data.

De Leener B, Lévy S, Dupont SM, Fonov VS, Stikov N, Louis Collins D, Callot V, Cohen-Adad J.

Neuroimage. 2017 Jan 15;145(Pt A):24-43. doi: 10.1016/j.neuroimage.2016.10.009. Epub 2016 Oct 5.

PMID:
27720818
24.

MINC 2.0: A Flexible Format for Multi-Modal Images.

Vincent RD, Neelin P, Khalili-Mahani N, Janke AL, Fonov VS, Robbins SM, Baghdadi L, Lerch J, Sled JG, Adalat R, MacDonald D, Zijdenbos AP, Collins DL, Evans AC.

Front Neuroinform. 2016 Aug 11;10:35. doi: 10.3389/fninf.2016.00035. eCollection 2016.

25.

VoxelStats: A MATLAB Package for Multi-Modal Voxel-Wise Brain Image Analysis.

Mathotaarachchi S, Wang S, Shin M, Pascoal TA, Benedet AL, Kang MS, Beaudry T, Fonov VS, Gauthier S, Labbe A, Rosa-Neto P.

Front Neuroinform. 2016 Jun 15;10:20. doi: 10.3389/fninf.2016.00020. eCollection 2016.

26.

The developmental relationship between DHEA and visual attention is mediated by structural plasticity of cortico-amygdalar networks.

Nguyen TV, Gower P, Albaugh MD, Botteron KN, Hudziak JJ, Fonov VS, Collins L, Ducharme S, McCracken JT.

Psychoneuroendocrinology. 2016 Aug;70:122-33. doi: 10.1016/j.psyneuen.2016.05.003. Epub 2016 May 6.

27.

Development of cortical shape in the human brain from 6 to 24months of age via a novel measure of shape complexity.

Kim SH, Lyu I, Fonov VS, Vachet C, Hazlett HC, Smith RG, Piven J, Dager SR, Mckinstry RC, Pruett JR Jr, Evans AC, Collins DL, Botteron KN, Schultz RT, Gerig G, Styner MA; IBIS Network.

Neuroimage. 2016 Jul 15;135:163-76. doi: 10.1016/j.neuroimage.2016.04.053. Epub 2016 May 3.

28.

Non-Local Means Inpainting of MS Lesions in Longitudinal Image Processing.

Guizard N, Nakamura K, Coupé P, Fonov VS, Arnold DL, Collins DL.

Front Neurosci. 2015 Dec 15;9:456. doi: 10.3389/fnins.2015.00456. eCollection 2015.

29.

Detection of Alzheimer's disease signature in MR images seven years before conversion to dementia: Toward an early individual prognosis.

Coupé P, Fonov VS, Bernard C, Zandifar A, Eskildsen SF, Helmer C, Manjón JV, Amieva H, Dartigues JF, Allard M, Catheline G, Collins DL; Alzheimer's Disease Neuroimaging Initiative.

Hum Brain Mapp. 2015 Dec;36(12):4758-70. doi: 10.1002/hbm.22926. Epub 2015 Oct 10.

30.

Spatio-Temporal Regularization for Longitudinal Registration to Subject-Specific 3d Template.

Guizard N, Fonov VS, García-Lorenzo D, Nakamura K, Aubert-Broche B, Collins DL.

PLoS One. 2015 Aug 24;10(8):e0133352. doi: 10.1371/journal.pone.0133352. eCollection 2015.

31.

Assessing atrophy measurement techniques in dementia: Results from the MIRIAD atrophy challenge.

Cash DM, Frost C, Iheme LO, Ünay D, Kandemir M, Fripp J, Salvado O, Bourgeat P, Reuter M, Fischl B, Lorenzi M, Frisoni GB, Pennec X, Pierson RK, Gunter JL, Senjem ML, Jack CR Jr, Guizard N, Fonov VS, Collins DL, Modat M, Cardoso MJ, Leung KK, Wang H, Das SR, Yushkevich PA, Malone IB, Fox NC, Schott JM, Ourselin S.

Neuroimage. 2015 Dec;123:149-64. doi: 10.1016/j.neuroimage.2015.07.087. Epub 2015 Aug 11.

32.

Rotation-invariant multi-contrast non-local means for MS lesion segmentation.

Guizard N, Coupé P, Fonov VS, Manjón JV, Arnold DL, Collins DL.

Neuroimage Clin. 2015 May 13;8:376-89. doi: 10.1016/j.nicl.2015.05.001. eCollection 2015.

33.

A stereotaxic, population-averaged T1w ovine brain atlas including cerebral morphology and tissue volumes.

Nitzsche B, Frey S, Collins LD, Seeger J, Lobsien D, Dreyer A, Kirsten H, Stoffel MH, Fonov VS, Boltze J.

Front Neuroanat. 2015 Jun 4;9:69. doi: 10.3389/fnana.2015.00069. eCollection 2015.

34.

Accurate age classification of 6 and 12 month-old infants based on resting-state functional connectivity magnetic resonance imaging data.

Pruett JR Jr, Kandala S, Hoertel S, Snyder AZ, Elison JT, Nishino T, Feczko E, Dosenbach NU, Nardos B, Power JD, Adeyemo B, Botteron KN, McKinstry RC, Evans AC, Hazlett HC, Dager SR, Paterson S, Schultz RT, Collins DL, Fonov VS, Styner M, Gerig G, Das S, Kostopoulos P, Constantino JN, Estes AM; IBIS Network, Petersen SE, Schlaggar BL, Piven J.

Dev Cogn Neurosci. 2015 Apr;12:123-33. doi: 10.1016/j.dcn.2015.01.003. Epub 2015 Feb 3.

35.

Standardized evaluation of algorithms for computer-aided diagnosis of dementia based on structural MRI: the CADDementia challenge.

Bron EE, Smits M, van der Flier WM, Vrenken H, Barkhof F, Scheltens P, Papma JM, Steketee RM, Méndez Orellana C, Meijboom R, Pinto M, Meireles JR, Garrett C, Bastos-Leite AJ, Abdulkadir A, Ronneberger O, Amoroso N, Bellotti R, Cárdenas-Peña D, Álvarez-Meza AM, Dolph CV, Iftekharuddin KM, Eskildsen SF, Coupé P, Fonov VS, Franke K, Gaser C, Ledig C, Guerrero R, Tong T, Gray KR, Moradi E, Tohka J, Routier A, Durrleman S, Sarica A, Di Fatta G, Sensi F, Chincarini A, Smith GM, Stoyanov ZV, Sørensen L, Nielsen M, Tangaro S, Inglese P, Wachinger C, Reuter M, van Swieten JC, Niessen WJ, Klein S; Alzheimer's Disease Neuroimaging Initiative.

Neuroimage. 2015 May 1;111:562-79. doi: 10.1016/j.neuroimage.2015.01.048. Epub 2015 Jan 31.

36.

Structural imaging biomarkers of Alzheimer's disease: predicting disease progression.

Eskildsen SF, Coupé P, Fonov VS, Pruessner JC, Collins DL; Alzheimer's Disease Neuroimaging Initiative.

Neurobiol Aging. 2015 Jan;36 Suppl 1:S23-31. doi: 10.1016/j.neurobiolaging.2014.04.034. Epub 2014 Aug 28.

PMID:
25260851
37.

Morphometric changes of the corpus callosum in congenital blindness.

Tomaiuolo F, Campana S, Collins DL, Fonov VS, Ricciardi E, Sartori G, Pietrini P, Kupers R, Ptito M.

PLoS One. 2014 Sep 25;9(9):e107871. doi: 10.1371/journal.pone.0107871. eCollection 2014.

38.

Patch-based label fusion segmentation of brainstem structures with dual-contrast MRI for Parkinson's disease.

Xiao Y, Fonov VS, Beriault S, Gerard I, Sadikot AF, Pike GB, Collins DL.

Int J Comput Assist Radiol Surg. 2015 Jul;10(7):1029-41. doi: 10.1007/s11548-014-1119-4. Epub 2014 Sep 24.

PMID:
25249471
39.

Framework for integrated MRI average of the spinal cord white and gray matter: the MNI-Poly-AMU template.

Fonov VS, Le Troter A, Taso M, De Leener B, Lévêque G, Benhamou M, Sdika M, Benali H, Pradat PF, Collins DL, Callot V, Cohen-Adad J.

Neuroimage. 2014 Nov 15;102 Pt 2:817-27. doi: 10.1016/j.neuroimage.2014.08.057. Epub 2014 Sep 7.

PMID:
25204864
40.

Nonrigid registration of ultrasound and MRI using contextual conditioned mutual information.

Rivaz H, Karimaghaloo Z, Fonov VS, Collins DL.

IEEE Trans Med Imaging. 2014 Mar;33(3):708-25. doi: 10.1109/TMI.2013.2294630.

PMID:
24595344
41.

Jacobian integration method increases the statistical power to measure gray matter atrophy in multiple sclerosis.

Nakamura K, Guizard N, Fonov VS, Narayanan S, Collins DL, Arnold DL.

Neuroimage Clin. 2013 Oct 29;4:10-7. doi: 10.1016/j.nicl.2013.10.015. eCollection 2014.

42.

A new method for structural volume analysis of longitudinal brain MRI data and its application in studying the growth trajectories of anatomical brain structures in childhood.

Aubert-Broche B, Fonov VS, García-Lorenzo D, Mouiha A, Guizard N, Coupé P, Eskildsen SF, Collins DL.

Neuroimage. 2013 Nov 15;82:393-402. doi: 10.1016/j.neuroimage.2013.05.065. Epub 2013 May 26.

PMID:
23719155
43.

Adaptive prior probability and spatial temporal intensity change estimation for segmentation of the one-year-old human brain.

Kim SH, Fonov VS, Dietrich C, Vachet C, Hazlett HC, Smith RG, Graves MM, Piven J, Gilmore JH, Dager SR, McKinstry RC, Paterson S, Evans AC, Collins DL, Gerig G, Styner MA; IBIS network.

J Neurosci Methods. 2013 Jan 15;212(1):43-55. doi: 10.1016/j.jneumeth.2012.09.018. Epub 2012 Sep 29.

44.

Scoring by nonlocal image patch estimator for early detection of Alzheimer's disease.

Coupé P, Eskildsen SF, Manjón JV, Fonov VS, Pruessner JC, Allard M, Collins DL; Alzheimer's Disease Neuroimaging Initiative.

Neuroimage Clin. 2012 Oct 17;1(1):141-52. doi: 10.1016/j.nicl.2012.10.002. eCollection 2012.

45.

Simultaneous segmentation and grading of anatomical structures for patient's classification: application to Alzheimer's disease.

Coupé P, Eskildsen SF, Manjón JV, Fonov VS, Collins DL; Alzheimer's disease Neuroimaging Initiative.

Neuroimage. 2012 Feb 15;59(4):3736-47. doi: 10.1016/j.neuroimage.2011.10.080. Epub 2011 Nov 9.

46.

Gradient distortions in MRI: characterizing and correcting for their effects on SIENA-generated measures of brain volume change.

Caramanos Z, Fonov VS, Francis SJ, Narayanan S, Pike GB, Collins DL, Arnold DL.

Neuroimage. 2010 Jan 15;49(2):1601-11. doi: 10.1016/j.neuroimage.2009.08.008. Epub 2009 Aug 12. Erratum in: Neuroimage. 2010 Feb 15;49(4):3498.

PMID:
19682586
47.

The effect of template choice on morphometric analysis of pediatric brain data.

Yoon U, Fonov VS, Perusse D, Evans AC; Brain Development Cooperative Group.

Neuroimage. 2009 Apr 15;45(3):769-77. doi: 10.1016/j.neuroimage.2008.12.046. Epub 2009 Jan 6.

PMID:
19167509

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