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Items: 1 to 50 of 56

1.

Prediction of acute myeloid leukaemia risk in healthy individuals.

Abelson S, Collord G, Ng SWK, Weissbrod O, Mendelson Cohen N, Niemeyer E, Barda N, Zuzarte PC, Heisler L, Sundaravadanam Y, Luben R, Hayat S, Wang TT, Zhao Z, Cirlan I, Pugh TJ, Soave D, Ng K, Latimer C, Hardy C, Raine K, Jones D, Hoult D, Britten A, McPherson JD, Johansson M, Mbabaali F, Eagles J, Miller JK, Pasternack D, Timms L, Krzyzanowski P, Awadalla P, Costa R, Segal E, Bratman SV, Beer P, Behjati S, Martincorena I, Wang JCY, Bowles KM, Quirós JR, Karakatsani A, La Vecchia C, Trichopoulou A, Salamanca-Fernández E, Huerta JM, Barricarte A, Travis RC, Tumino R, Masala G, Boeing H, Panico S, Kaaks R, Krämer A, Sieri S, Riboli E, Vineis P, Foll M, McKay J, Polidoro S, Sala N, Khaw KT, Vermeulen R, Campbell PJ, Papaemmanuil E, Minden MD, Tanay A, Balicer RD, Wareham NJ, Gerstung M, Dick JE, Brennan P, Vassiliou GS, Shlush LI.

Nature. 2018 Jul 9. doi: 10.1038/s41586-018-0317-6. [Epub ahead of print]

PMID:
29988082
2.

Corrigendum re "Genetic Variants Related to Longer Telomere Length are Associated with Increased Risk of Renal Cell Carcinoma" [Eur Urol 2017;72:747-54].

Machiela MJ, Hofmann JN, Carreras-Torres R, Brown KM, Johansson M, Wang Z, Foll M, Li P, Rothman N, Savage SA, Gaborieau V, McKay JD, Ye Y, Henrion M, Bruinsma F, Jordan S, Severi G, Hveem K, Vatten LJ, Fletcher T, Koppova K, Larsson SC, Wolk A, Banks RE, Selby PJ, Easton DF, Pharoah P, Andreotti G, Freeman LEB, Koutros S, Albanes D, Mannisto S, Weinstein S, Clark PE, Edwards TE, Lipworth L, Gapstur SM, Stevens VL, Carol H, Freedman ML, Pomerantz MM, Cho E, Kraft P, Preston MA, Wilson KM, Gaziano JM, Sesso HS, Black A, Freedman ND, Huang WY, Anema JG, Kahnoski RJ, Lane BR, Noyes SL, Petillo D, Colli LM, Sampson JN, Besse C, Blanche H, Boland A, Burdette L, Prokhortchouk E, Skryabin KG, Yeager M, Mijuskovic M, Ognjanovic M, Foretova L, Holcatova I, Janout V, Mates D, Mukeriya A, Rascu S, Zaridze D, Bencko V, Cybulski C, Fabianova E, Jinga V, Lissowska J, Lubinski J, Navratilova M, Rudnai P, Szeszenia-Dabrowska N, Benhamou S, Cancel-Tassin G, Cussenot O, Bueno-de-Mesquita HBA, Canzian F, Duell EJ, Ljungberg B, Sitaram RT, Peters U, White E, Anderson GL, Johnson L, Luo J, Buring J, Lee IM, Chow WH, Moore LE, Wood C, Eisen T, Larkin J, Choueiri TK, Lathrop GM, Teh BT, Deleuze JF, Wu X, Houlston RS, Brennan P, Chanock SJ, Scelo G, Purdue MP.

Eur Urol. 2018 May 28. pii: S0302-2838(18)30366-X. doi: 10.1016/j.eururo.2018.05.017. [Epub ahead of print] No abstract available.

PMID:
29853305
3.

Integrative genomic profiling of large-cell neuroendocrine carcinomas reveals distinct subtypes of high-grade neuroendocrine lung tumors.

George J, Walter V, Peifer M, Alexandrov LB, Seidel D, Leenders F, Maas L, Müller C, Dahmen I, Delhomme TM, Ardin M, Leblay N, Byrnes G, Sun R, De Reynies A, McLeer-Florin A, Bosco G, Malchers F, Menon R, Altmüller J, Becker C, Nürnberg P, Achter V, Lang U, Schneider PM, Bogus M, Soloway MG, Wilkerson MD, Cun Y, McKay JD, Moro-Sibilot D, Brambilla CG, Lantuejoul S, Lemaitre N, Soltermann A, Weder W, Tischler V, Brustugun OT, Lund-Iversen M, Helland Å, Solberg S, Ansén S, Wright G, Solomon B, Roz L, Pastorino U, Petersen I, Clement JH, Sänger J, Wolf J, Vingron M, Zander T, Perner S, Travis WD, Haas SA, Olivier M, Foll M, Büttner R, Hayes DN, Brambilla E, Fernandez-Cuesta L, Thomas RK.

Nat Commun. 2018 Mar 13;9(1):1048. doi: 10.1038/s41467-018-03099-x.

4.

Reproducible proteomics sample preparation for single FFPE tissue slices using acid-labile surfactant and direct trypsinization.

Föll MC, Fahrner M, Oria VO, Kühs M, Biniossek ML, Werner M, Bronsert P, Schilling O.

Clin Proteomics. 2018 Mar 6;15:11. doi: 10.1186/s12014-018-9188-y. eCollection 2018.

5.

Genomic analysis of head and neck cancer cases from two high incidence regions.

Perdomo S, Anantharaman D, Foll M, Abedi-Ardekani B, Durand G, Reis Rosa LA, Holmila R, Le Calvez-Kelm F, Tajara EH, Wünsch-Filho V, Levi JE, Vilensky M, Polesel J, Holcatova I, Simonato L, Canova C, Lagiou P, McKay JD, Brennan P.

PLoS One. 2018 Jan 29;13(1):e0191701. doi: 10.1371/journal.pone.0191701. eCollection 2018.

6.

The Evolutionary History of Nebraska Deer Mice: Local Adaptation in the Face of Strong Gene Flow.

Pfeifer SP, Laurent S, Sousa VC, Linnen CR, Foll M, Excoffier L, Hoekstra HE, Jensen JD.

Mol Biol Evol. 2018 Apr 1;35(4):792-806. doi: 10.1093/molbev/msy004.

7.

Proteomic Characterization of Prostate Cancer to Distinguish Nonmetastasizing and Metastasizing Primary Tumors and Lymph Node Metastases.

Müller AK, Föll M, Heckelmann B, Kiefer S, Werner M, Schilling O, Biniossek ML, Jilg CA, Drendel V.

Neoplasia. 2018 Feb;20(2):140-151. doi: 10.1016/j.neo.2017.10.009. Epub 2017 Dec 14.

8.

Identification of tissue damage, extracellular matrix remodeling and bacterial challenge as common mechanisms associated with high-risk cutaneous squamous cell carcinomas.

Föll MC, Fahrner M, Gretzmeier C, Thoma K, Biniossek ML, Kiritsi D, Meiss F, Schilling O, Nyström A, Kern JS.

Matrix Biol. 2018 Mar;66:1-21. doi: 10.1016/j.matbio.2017.11.004. Epub 2017 Nov 20.

PMID:
29158163
9.

Circulating tumor DNA detection in head and neck cancer: evaluation of two different detection approaches.

Perdomo S, Avogbe PH, Foll M, Abedi-Ardekani B, Facciolla VL, Anantharaman D, Chopard P, Calvez-Kelm FL, Vilensky M, Polesel J, Holcatova I, Simonato L, Canova C, Lagiou P, McKay JD, Brennan P.

Oncotarget. 2017 Aug 7;8(42):72621-72632. doi: 10.18632/oncotarget.20004. eCollection 2017 Sep 22.

10.

Molecular Subtypes of Pulmonary Large-cell Neuroendocrine Carcinoma Predict Chemotherapy Treatment Outcome.

Derks JL, Leblay N, Thunnissen E, van Suylen RJ, den Bakker M, Groen HJM, Smit EF, Damhuis R, van den Broek EC, Charbrier A, Foll M, McKay JD, Fernandez-Cuesta L, Speel EM, Dingemans AC; PALGA-Group.

Clin Cancer Res. 2018 Jan 1;24(1):33-42. doi: 10.1158/1078-0432.CCR-17-1921. Epub 2017 Oct 24.

PMID:
29066508
11.

Genetic Variants Related to Longer Telomere Length are Associated with Increased Risk of Renal Cell Carcinoma.

Machiela MJ, Hofmann JN, Carreras-Torres R, Brown KM, Johansson M, Wang Z, Foll M, Li P, Rothman N, Savage SA, Gaborieau V, McKay JD, Ye Y, Henrion M, Bruinsma F, Jordan S, Severi G, Hveem K, Vatten LJ, Fletcher T, Koppova K, Larsson SC, Wolk A, Banks RE, Selby PJ, Easton DF, Pharoah P, Andreotti G, Freeman LEB, Koutros S, Albanes D, Mannisto S, Weinstein S, Clark PE, Edwards TE, Lipworth L, Gapstur SM, Stevens VL, Carol H, Freedman ML, Pomerantz MM, Cho E, Kraft P, Preston MA, Wilson KM, Gaziano JM, Sesso HS, Black A, Freedman ND, Huang WY, Anema JG, Kahnoski RJ, Lane BR, Noyes SL, Petillo D, Colli LM, Sampson JN, Besse C, Blanche H, Boland A, Burdette L, Prokhortchouk E, Skryabin KG, Yeager M, Mijuskovic M, Ognjanovic M, Foretova L, Holcatova I, Janout V, Mates D, Mukeriya A, Rascu S, Zaridze D, Bencko V, Cybulski C, Fabianova E, Jinga V, Lissowska J, Lubinski J, Navratilova M, Rudnai P, Szeszenia-Dabrowska N, Benhamou S, Cancel-Tassin G, Cussenot O, Bueno-de-Mesquita HB, Canzian F, Duell EJ, Ljungberg B, Sitaram RT, Peters U, White E, Anderson GL, Johnson L, Luo J, Buring J, Lee IM, Chow WH, Moore LE, Wood C, Eisen T, Larkin J, Choueiri TK, Lathrop GM, Teh BT, Deleuze JF, Wu X, Houlston RS, Brennan P, Chanock SJ, Scelo G, Purdue MP.

Eur Urol. 2017 Nov;72(5):747-754. doi: 10.1016/j.eururo.2017.07.015. Epub 2017 Aug 7. Erratum in: Eur Urol. 2018 May 28;:.

PMID:
28797570
12.

Genome-wide association study identifies multiple risk loci for renal cell carcinoma.

Scelo G, Purdue MP, Brown KM, Johansson M, Wang Z, Eckel-Passow JE, Ye Y, Hofmann JN, Choi J, Foll M, Gaborieau V, Machiela MJ, Colli LM, Li P, Sampson JN, Abedi-Ardekani B, Besse C, Blanche H, Boland A, Burdette L, Chabrier A, Durand G, Le Calvez-Kelm F, Prokhortchouk E, Robinot N, Skryabin KG, Wozniak MB, Yeager M, Basta-Jovanovic G, Dzamic Z, Foretova L, Holcatova I, Janout V, Mates D, Mukeriya A, Rascu S, Zaridze D, Bencko V, Cybulski C, Fabianova E, Jinga V, Lissowska J, Lubinski J, Navratilova M, Rudnai P, Szeszenia-Dabrowska N, Benhamou S, Cancel-Tassin G, Cussenot O, Baglietto L, Boeing H, Khaw KT, Weiderpass E, Ljungberg B, Sitaram RT, Bruinsma F, Jordan SJ, Severi G, Winship I, Hveem K, Vatten LJ, Fletcher T, Koppova K, Larsson SC, Wolk A, Banks RE, Selby PJ, Easton DF, Pharoah P, Andreotti G, Freeman LEB, Koutros S, Albanes D, Männistö S, Weinstein S, Clark PE, Edwards TL, Lipworth L, Gapstur SM, Stevens VL, Carol H, Freedman ML, Pomerantz MM, Cho E, Kraft P, Preston MA, Wilson KM, Michael Gaziano J, Sesso HD, Black A, Freedman ND, Huang WY, Anema JG, Kahnoski RJ, Lane BR, Noyes SL, Petillo D, Teh BT, Peters U, White E, Anderson GL, Johnson L, Luo J, Buring J, Lee IM, Chow WH, Moore LE, Wood C, Eisen T, Henrion M, Larkin J, Barman P, Leibovich BC, Choueiri TK, Mark Lathrop G, Rothman N, Deleuze JF, McKay JD, Parker AS, Wu X, Houlston RS, Brennan P, Chanock SJ.

Nat Commun. 2017 Jun 9;8:15724. doi: 10.1038/ncomms15724.

13.

BAP1 Is Altered by Copy Number Loss, Mutation, and/or Loss of Protein Expression in More Than 70% of Malignant Peritoneal Mesotheliomas.

Leblay N, Leprêtre F, Le Stang N, Gautier-Stein A, Villeneuve L, Isaac S, Maillet D, Galateau-Sallé F, Villenet C, Sebda S, Goracci A, Byrnes G, McKay JD, Figeac M, Glehen O, Gilly FN, Foll M, Fernandez-Cuesta L, Brevet M.

J Thorac Oncol. 2017 Apr;12(4):724-733. doi: 10.1016/j.jtho.2016.12.019. Epub 2016 Dec 27.

14.

An experimental evaluation of drug-induced mutational meltdown as an antiviral treatment strategy.

Bank C, Renzette N, Liu P, Matuszewski S, Shim H, Foll M, Bolon DN, Zeldovich KB, Kowalik TF, Finberg RW, Wang JP, Jensen JD.

Evolution. 2016 Nov;70(11):2470-2484. doi: 10.1111/evo.13041. Epub 2016 Sep 13.

PMID:
27566611
15.

KRAS mutations in blood circulating cell-free DNA: a pancreatic cancer case-control.

Le Calvez-Kelm F, Foll M, Wozniak MB, Delhomme TM, Durand G, Chopard P, Pertesi M, Fabianova E, Adamcakova Z, Holcatova I, Foretova L, Janout V, Vallee MP, Rinaldi S, Brennan P, McKay JD, Byrnes GB, Scelo G.

Oncotarget. 2016 Nov 29;7(48):78827-78840. doi: 10.18632/oncotarget.12386.

16.

Long-distance dispersal suppresses introgression of local alleles during range expansions.

Amorim CE, Hofer T, Ray N, Foll M, Ruiz-Linares A, Excoffier L.

Heredity (Edinb). 2017 Feb;118(2):135-142. doi: 10.1038/hdy.2016.68. Epub 2016 Aug 31.

17.

Identification of Circulating Tumor DNA for the Early Detection of Small-cell Lung Cancer.

Fernandez-Cuesta L, Perdomo S, Avogbe PH, Leblay N, Delhomme TM, Gaborieau V, Abedi-Ardekani B, Chanudet E, Olivier M, Zaridze D, Mukeria A, Vilensky M, Holcatova I, Polesel J, Simonato L, Canova C, Lagiou P, Brambilla C, Brambilla E, Byrnes G, Scelo G, Le Calvez-Kelm F, Foll M, McKay JD, Brennan P.

EBioMedicine. 2016 Aug;10:117-23. doi: 10.1016/j.ebiom.2016.06.032. Epub 2016 Jun 25.

18.

Likelihood-Free Inference in High-Dimensional Models.

Kousathanas A, Leuenberger C, Helfer J, Quinodoz M, Foll M, Wegmann D.

Genetics. 2016 Jun;203(2):893-904. doi: 10.1534/genetics.116.187567. Epub 2016 Apr 6.

19.

Detecting and Quantifying Changing Selection Intensities from Time-Sampled Polymorphism Data.

Shim H, Laurent S, Matuszewski S, Foll M, Jensen JD.

G3 (Bethesda). 2016 Apr 7;6(4):893-904. doi: 10.1534/g3.115.023200.

20.

The past, present and future of genomic scans for selection.

Jensen JD, Foll M, Bernatchez L.

Mol Ecol. 2016 Jan;25(1):1-4. doi: 10.1111/mec.13493. No abstract available.

PMID:
26745554
21.

Inferring the age of a fixed beneficial allele.

Ormond L, Foll M, Ewing GB, Pfeifer SP, Jensen JD.

Mol Ecol. 2016 Jan;25(1):157-69. doi: 10.1111/mec.13478. Epub 2015 Dec 24.

PMID:
26576754
22.

A Novel Risk Locus at 6p21.3 for Epstein-Barr Virus-Positive Hodgkin Lymphoma.

Delahaye-Sourdeix M, Urayama KY, Gaborieau V, Veenstra R, Foll M, Chabrier A, Benavente Y, Nieters A, Becker N, Foretova L, Maynadié M, Staines A, Smedby KE, Glimelius I, Lightfoot T, Cocco P, Galan P, Vatten LJ, Duell EJ, Kiemeney L, Roman E, de Sanjosé S, Lathrop M, Melbye M, Brennan P, Diepstra A, van den Berg A, Hjalgrim H, Jarrett RF, McKay JD.

Cancer Epidemiol Biomarkers Prev. 2015 Dec;24(12):1838-43. doi: 10.1158/1055-9965.EPI-15-0534. Epub 2015 Sep 24.

23.

Alterations in the NF2/LATS1/LATS2/YAP Pathway in Schwannomas.

Oh JE, Ohta T, Satomi K, Foll M, Durand G, McKay J, Le Calvez-Kelm F, Mittelbronn M, Brokinkel B, Paulus W, Ohgaki H.

J Neuropathol Exp Neurol. 2015 Oct;74(10):952-9. doi: 10.1097/NEN.0000000000000238.

PMID:
26360373
24.

Rare Circulating Cells in Familial Waldenström Macroglobulinemia Displaying the MYD88 L265P Mutation Are Enriched by Epstein-Barr Virus Immortalization.

Pertesi M, Galia P, Nazaret N, Vallée M, Garderet L, Leleu X, Avet-Loiseau H, Foll M, Byrnes G, Lachuer J, McKay JD, Dumontet C.

PLoS One. 2015 Sep 9;10(9):e0136505. doi: 10.1371/journal.pone.0136505. eCollection 2015.

25.

Quantifying polymorphism and divergence from epigenetic data: a framework for inferring the action of selection.

Mahajan S, Crisci J, Wong A, Akbarian S, Foll M, Jensen JD.

Front Genet. 2015 May 28;6:190. doi: 10.3389/fgene.2015.00190. eCollection 2015.

26.

Worldwide Population Structure, Long-Term Demography, and Local Adaptation of Helicobacter pylori.

Montano V, Didelot X, Foll M, Linz B, Reinhardt R, Suerbaum S, Moodley Y, Jensen JD.

Genetics. 2015 Jul;200(3):947-63. doi: 10.1534/genetics.115.176404. Epub 2015 May 20.

27.

Detection of convergent genome-wide signals of adaptation to tropical forests in humans.

Amorim CE, Daub JT, Salzano FM, Foll M, Excoffier L.

PLoS One. 2015 Apr 7;10(4):e0121557. doi: 10.1371/journal.pone.0121557. eCollection 2015.

28.

Neutral and adaptive drivers of microgeographic genetic divergence within continuous populations: the case of the neotropical tree Eperua falcata (Aubl.).

Brousseau L, Foll M, Scotti-Saintagne C, Scotti I.

PLoS One. 2015 Mar 25;10(3):e0121394. doi: 10.1371/journal.pone.0121394. eCollection 2015. Erratum in: PLoS One. 2015;10(4):e0127134.

29.

Positive Selection Drives Preferred Segment Combinations during Influenza Virus Reassortment.

Zeldovich KB, Liu P, Renzette N, Foll M, Pham ST, Venev SV, Gallagher GR, Bolon DN, Kurt-Jones EA, Jensen JD, Caffrey DR, Schiffer CA, Kowalik TF, Wang JP, Finberg RW.

Mol Biol Evol. 2015 Jun;32(6):1519-32. doi: 10.1093/molbev/msv044. Epub 2015 Feb 23.

30.

Thinking too positive? Revisiting current methods of population genetic selection inference.

Bank C, Ewing GB, Ferrer-Admettla A, Foll M, Jensen JD.

Trends Genet. 2014 Dec;30(12):540-6. doi: 10.1016/j.tig.2014.09.010. Epub 2014 Nov 19. Review.

PMID:
25438719
31.

Continental-scale footprint of balancing and positive selection in a small rodent (Microtus arvalis).

Fischer MC, Foll M, Heckel G, Excoffier L.

PLoS One. 2014 Nov 10;9(11):e112332. doi: 10.1371/journal.pone.0112332. eCollection 2014.

32.

Widespread signals of convergent adaptation to high altitude in Asia and america.

Foll M, Gaggiotti OE, Daub JT, Vatsiou A, Excoffier L.

Am J Hum Genet. 2014 Oct 2;95(4):394-407. doi: 10.1016/j.ajhg.2014.09.002. Epub 2014 Sep 25.

33.

Adaptive, convergent origins of the pygmy phenotype in African rainforest hunter-gatherers.

Perry GH, Foll M, Grenier JC, Patin E, Nédélec Y, Pacis A, Barakatt M, Gravel S, Zhou X, Nsobya SL, Excoffier L, Quintana-Murci L, Dominy NJ, Barreiro LB.

Proc Natl Acad Sci U S A. 2014 Sep 2;111(35):E3596-603. doi: 10.1073/pnas.1402875111. Epub 2014 Aug 18.

34.

WFABC: a Wright-Fisher ABC-based approach for inferring effective population sizes and selection coefficients from time-sampled data.

Foll M, Shim H, Jensen JD.

Mol Ecol Resour. 2015 Jan;15(1):87-98. doi: 10.1111/1755-0998.12280. Epub 2014 Jun 11.

PMID:
24834845
35.

Influenza virus drug resistance: a time-sampled population genetics perspective.

Foll M, Poh YP, Renzette N, Ferrer-Admetlla A, Bank C, Shim H, Malaspinas AS, Ewing G, Liu P, Wegmann D, Caffrey DR, Zeldovich KB, Bolon DN, Wang JP, Kowalik TF, Schiffer CA, Finberg RW, Jensen JD.

PLoS Genet. 2014 Feb 27;10(2):e1004185. doi: 10.1371/journal.pgen.1004185. eCollection 2014 Feb.

36.

Robust demographic inference from genomic and SNP data.

Excoffier L, Dupanloup I, Huerta-Sánchez E, Sousa VC, Foll M.

PLoS Genet. 2013 Oct;9(10):e1003905. doi: 10.1371/journal.pgen.1003905. Epub 2013 Oct 24.

37.

Approximate Bayesian computation.

Sunnåker M, Busetto AG, Numminen E, Corander J, Foll M, Dessimoz C.

PLoS Comput Biol. 2013;9(1):e1002803. doi: 10.1371/journal.pcbi.1002803. Epub 2013 Jan 10.

38.

Genomic data reveal a complex making of humans.

Alves I, Srámková Hanulová A, Foll M, Excoffier L.

PLoS Genet. 2012;8(7):e1002837. doi: 10.1371/journal.pgen.1002837. Epub 2012 Jul 19. Review.

39.

Evolutionary forces shaping genomic islands of population differentiation in humans.

Hofer T, Foll M, Excoffier L.

BMC Genomics. 2012 Mar 22;13:107. doi: 10.1186/1471-2164-13-107.

40.

Quantifying population structure using the F-model.

Gaggiotti OE, Foll M.

Mol Ecol Resour. 2010 Sep;10(5):821-30. doi: 10.1111/j.1755-0998.2010.02873.x. Epub 2010 May 13.

PMID:
21565093
41.

fastsimcoal: a continuous-time coalescent simulator of genomic diversity under arbitrarily complex evolutionary scenarios.

Excoffier L, Foll M.

Bioinformatics. 2011 May 1;27(9):1332-4. doi: 10.1093/bioinformatics/btr124. Epub 2011 Mar 12.

PMID:
21398675
42.

Enhanced AFLP genome scans detect local adaptation in high-altitude populations of a small rodent (Microtus arvalis).

Fischer MC, Foll M, Excoffier L, Heckel G.

Mol Ecol. 2011 Apr;20(7):1450-62. doi: 10.1111/j.1365-294X.2011.05015.x. Epub 2011 Feb 24.

PMID:
21352386
43.

SPLATCHE2: a spatially explicit simulation framework for complex demography, genetic admixture and recombination.

Ray N, Currat M, Foll M, Excoffier L.

Bioinformatics. 2010 Dec 1;26(23):2993-4. doi: 10.1093/bioinformatics/btq579. Epub 2010 Oct 17.

PMID:
20956243
44.

Estimating population structure from AFLP amplification intensity.

Foll M, Fischer MC, Heckel G, Excoffier L.

Mol Ecol. 2010 Nov;19(21):4638-47. doi: 10.1111/j.1365-294X.2010.04820.x. Epub 2010 Sep 27.

PMID:
20874760
45.

In defence of model-based inference in phylogeography.

Beaumont MA, Nielsen R, Robert C, Hey J, Gaggiotti O, Knowles L, Estoup A, Panchal M, Corander J, Hickerson M, Sisson SA, Fagundes N, Chikhi L, Beerli P, Vitalis R, Cornuet JM, Huelsenbeck J, Foll M, Yang Z, Rousset F, Balding D, Excoffier L.

Mol Ecol. 2010 Feb;19(3):436-446. doi: 10.1111/j.1365-294X.2009.04515.x. Epub 2010 Jan 11.

46.

Disentangling the effects of evolutionary, demographic, and environmental factors influencing genetic structure of natural populations: Atlantic herring as a case study.

Gaggiotti OE, Bekkevold D, Jørgensen HB, Foll M, Carvalho GR, Andre C, Ruzzante DE.

Evolution. 2009 Nov;63(11):2939-51. doi: 10.1111/j.1558-5646.2009.00779.x. Epub 2009 Jul 16.

PMID:
19624724
47.

Detecting loci under selection in a hierarchically structured population.

Excoffier L, Hofer T, Foll M.

Heredity (Edinb). 2009 Oct;103(4):285-98. doi: 10.1038/hdy.2009.74. Epub 2009 Jul 22.

48.

Correcting for ascertainment bias in the inference of population structure.

Guillot G, Foll M.

Bioinformatics. 2009 Feb 15;25(4):552-4. doi: 10.1093/bioinformatics/btn665. Epub 2009 Jan 9.

PMID:
19136550
49.

A genome-scan method to identify selected loci appropriate for both dominant and codominant markers: a Bayesian perspective.

Foll M, Gaggiotti O.

Genetics. 2008 Oct;180(2):977-93. doi: 10.1534/genetics.108.092221. Epub 2008 Sep 9.

50.

An approximate Bayesian computation approach to overcome biases that arise when using amplified fragment length polymorphism markers to study population structure.

Foll M, Beaumont MA, Gaggiotti O.

Genetics. 2008 Jun;179(2):927-39. doi: 10.1534/genetics.107.084541. Epub 2008 May 27.

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