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Items: 1 to 50 of 93

1.

Ancient DNA from a 2,500-year-old Caribbean fossil places an extinct bird (Caracara creightoni) in a phylogenetic context.

Oswald JA, Allen JM, Witt KE, Folk RA, Albury NA, Steadman DW, Guralnick RP.

Mol Phylogenet Evol. 2019 Nov;140:106576. doi: 10.1016/j.ympev.2019.106576. Epub 2019 Aug 2.

PMID:
31381968
2.

Homoploid hybridization of plants in the Hengduan mountains region.

Yang R, Folk R, Zhang N, Gong X.

Ecol Evol. 2019 Jun 23;9(14):8399-8410. doi: 10.1002/ece3.5393. eCollection 2019 Jul. Review.

3.

The monocotyledonous underground: global climatic and phylogenetic patterns of geophyte diversity.

Howard CC, Folk RA, Beaulieu JM, Cellinese N.

Am J Bot. 2019 Jun;106(6):850-863. doi: 10.1002/ajb2.1289. Epub 2019 May 20.

PMID:
31106852
4.

Rates of niche and phenotype evolution lag behind diversification in a temperate radiation.

Folk RA, Stubbs RL, Mort ME, Cellinese N, Allen JM, Soltis PS, Soltis DE, Guralnick RP.

Proc Natl Acad Sci U S A. 2019 May 28;116(22):10874-10882. doi: 10.1073/pnas.1817999116. Epub 2019 May 13.

5.

Biodiversity synthesis across the green branches of the tree of life.

Allen JM, Folk RA, Soltis PS, Soltis DE, Guralnick RP.

Nat Plants. 2019 Jan;5(1):11-13. doi: 10.1038/s41477-018-0322-7. Epub 2018 Dec 31.

PMID:
30598535
6.

Geographic Range Dynamics Drove Ancient Hybridization in a Lineage of Angiosperms.

Folk RA, Visger CJ, Soltis PS, Soltis DE, Guralnick RP.

Am Nat. 2018 Aug;192(2):171-187. doi: 10.1086/698120. Epub 2018 Jun 20.

PMID:
30016161
7.

aTRAM 2.0: An Improved, Flexible Locus Assembler for NGS Data.

Allen JM, LaFrance R, Folk RA, Johnson KP, Guralnick RP.

Evol Bioinform Online. 2018 May 8;14:1176934318774546. doi: 10.1177/1176934318774546. eCollection 2018. Review.

8.

Maintenance of species boundaries in three sympatric Ligularia (Senecioneae, Asteraceae) species.

Zhang N, Ma Y, Folk RA, Yu J, Pan Y, Gong X.

J Integr Plant Biol. 2018 Oct;60(10):986-999. doi: 10.1111/jipb.12674. Epub 2018 Aug 27.

PMID:
29877612
9.

Ultrafast neuronal imaging of dopamine dynamics with designed genetically encoded sensors.

Patriarchi T, Cho JR, Merten K, Howe MW, Marley A, Xiong WH, Folk RW, Broussard GJ, Liang R, Jang MJ, Zhong H, Dombeck D, von Zastrow M, Nimmerjahn A, Gradinaru V, Williams JT, Tian L.

Science. 2018 Jun 29;360(6396). pii: eaat4422. doi: 10.1126/science.aat4422. Epub 2018 May 31.

10.

The hidden Heuchera: How science Twitter uncovered a globally imperiled species in Pennsylvania, USA.

Schuette S, Folk RA, Cantley JT, Martine CT.

PhytoKeys. 2018 Apr 17;(96):87-97. doi: 10.3897/phytokeys.96.23667. eCollection 2018.

11.

New prospects in the detection and comparative analysis of hybridization in the tree of life.

Folk RA, Soltis PS, Soltis DE, Guralnick R.

Am J Bot. 2018 Mar;105(3):364-375. doi: 10.1002/ajb2.1018. Epub 2018 Feb 14.

12.

Challenges of comprehensive taxon sampling in comparative biology: Wrestling with rosids.

Folk RA, Sun M, Soltis PS, Smith SA, Soltis DE, Guralnick RP.

Am J Bot. 2018 Mar;105(3):433-445. doi: 10.1002/ajb2.1059. Epub 2018 Apr 17.

13.

Pseudo-parallel patterns of disjunctions in an Arctic-alpine plant lineage.

Stubbs RL, Folk RA, Xiang CL, Soltis DE, Cellinese N.

Mol Phylogenet Evol. 2018 Jun;123:88-100. doi: 10.1016/j.ympev.2018.02.016. Epub 2018 Feb 26.

PMID:
29496541
14.

Evidence for continual hybridization rather than hybrid speciation between Ligularia duciformis and Lparadoxa (Asteraceae).

Zhang R, Gong X, Folk R.

PeerJ. 2017 Oct 11;5:e3884. doi: 10.7717/peerj.3884. eCollection 2017.

15.

Deep reticulation and incomplete lineage sorting obscure the diploid phylogeny of rain-lilies and allies (Amaryllidaceae tribe Hippeastreae).

García N, Folk RA, Meerow AW, Chamala S, Gitzendanner MA, Oliveira RS, Soltis DE, Soltis PS.

Mol Phylogenet Evol. 2017 Jun;111:231-247. doi: 10.1016/j.ympev.2017.04.003. Epub 2017 Apr 6.

PMID:
28390909
16.

Biodiversity and the Species Concept-Lineages are not Enough.

Freudenstein JV, Broe MB, Folk RA, Sinn BT.

Syst Biol. 2017 Jul 1;66(4):644-656. doi: 10.1093/sysbio/syw098.

PMID:
27798406
17.

Ancestral Gene Flow and Parallel Organellar Genome Capture Result in Extreme Phylogenomic Discord in a Lineage of Angiosperms.

Folk RA, Mandel JR, Freudenstein JV.

Syst Biol. 2017 May 1;66(3):320-337. doi: 10.1093/sysbio/syw083.

PMID:
27637567
18.

A protocol for targeted enrichment of intron-containing sequence markers for recent radiations: A phylogenomic example from Heuchera (Saxifragaceae).

Folk RA, Mandel JR, Freudenstein JV.

Appl Plant Sci. 2015 Aug 14;3(8). pii: apps.1500039. doi: 10.3732/apps.1500039. eCollection 2015 Aug.

19.

Phylogenetic relationships and character evolution in Heuchera (Saxifragaceae) on the basis of multiple nuclear loci.

Folk RA, Freudenstein JV.

Am J Bot. 2014 Sep;101(9):1532-50. doi: 10.3732/ajb.1400290. Epub 2014 Sep 21.

20.

Field theory of bicritical and tetracritical points. IV. Critical dynamics including reversible terms.

Folk R, Holovatch Y, Moser G.

Phys Rev E Stat Nonlin Soft Matter Phys. 2012 Feb;85(2 Pt 1):021143. Epub 2012 Feb 24.

PMID:
22463188
21.

Entropic equation of state and scaling functions near the critical point in uncorrelated scale-free networks.

von Ferber C, Folk R, Holovatch Y, Kenna R, Palchykov V.

Phys Rev E Stat Nonlin Soft Matter Phys. 2011 Jun;83(6 Pt 1):061114. Epub 2011 Jun 13.

PMID:
21797309
22.

Critical phenomena on scale-free networks: logarithmic corrections and scaling functions.

Palchykov V, von Ferber C, Folk R, Holovatch Y, Kenna R.

Phys Rev E Stat Nonlin Soft Matter Phys. 2010 Jul;82(1 Pt 1):011145. Epub 2010 Jul 30.

PMID:
20866603
23.

Dynamic scaling functions and amplitude ratios of stochastic models with energy conservation above Tc.

Dudka M, Folk R, Moser G.

Phys Rev E Stat Nonlin Soft Matter Phys. 2009 Sep;80(3 Pt 1):031124. Epub 2009 Sep 17.

PMID:
19905079
24.

Concentration and mass dependence of transport coefficients and correlation functions in binary mixtures with high mass asymmetry.

Fenz W, Mryglod IM, Prytula O, Folk R.

Phys Rev E Stat Nonlin Soft Matter Phys. 2009 Aug;80(2 Pt 1):021202. Epub 2009 Aug 31.

PMID:
19792112
25.

Coupled order-parameter system on a scale-free network.

Palchykov V, von Ferber C, Folk R, Holovatch Y.

Phys Rev E Stat Nonlin Soft Matter Phys. 2009 Jul;80(1 Pt 1):011108. Epub 2009 Jul 8.

PMID:
19658654
26.

Field theory of bicritical and tetracritical points. III. Relaxational dynamics including conservation of magnetization (model C).

Folk R, Holovatch Y, Moser G.

Phys Rev E Stat Nonlin Soft Matter Phys. 2009 Mar;79(3 Pt 1):031109. Epub 2009 Mar 12. Erratum in: Phys Rev E Stat Nonlin Soft Matter Phys. 2009 Mar;79(3 Pt 2):039905.

PMID:
19391904
27.

Liquid-vapor interfaces in XY -spin fluids: an inhomogeneous anisotropic integral-equation approach.

Omelyan IP, Folk R, Kovalenko A, Fenz W, Mryglod IM.

Phys Rev E Stat Nonlin Soft Matter Phys. 2009 Jan;79(1 Pt 1):011123. Epub 2009 Jan 22.

PMID:
19257017
28.

Field theory of bicritical and tetracritical points. II. Relaxational dynamics.

Folk R, Holovatch Y, Moser G.

Phys Rev E Stat Nonlin Soft Matter Phys. 2008 Oct;78(4 Pt 1):041125. Epub 2008 Oct 28.

PMID:
18999397
29.

Field theory of bicritical and tetracritical points. I. Statics.

Folk R, Holovatch Y, Moser G.

Phys Rev E Stat Nonlin Soft Matter Phys. 2008 Oct;78(4 Pt 1):041124. Epub 2008 Oct 28.

PMID:
18999396
30.

Possibility of Fisher renormalization of the critical exponents in an Ising fluid.

Fenz W, Folk R, Mryglod IM, Omelyan IP.

Phys Rev E Stat Nonlin Soft Matter Phys. 2007 Jun;75(6 Pt 1):061504. Epub 2007 Jun 21.

PMID:
17677266
31.

Liquid-vapor and liquid-liquid interfaces in Ising fluids: an integral equation approach.

Omelyan IP, Folk R, Mryglod IM, Fenz W.

J Chem Phys. 2007 Mar 28;126(12):124702.

PMID:
17411147
32.

Two-loop field theory and nonasymptotic properties of the dynamical model for the lambda transition in 3He-4He mixtures.

Folk R, Moser G.

Phys Rev E Stat Nonlin Soft Matter Phys. 2006 Jan;73(1 Pt 2):016141. Epub 2006 Jan 31.

PMID:
16486250
33.

Integral equation study of an ideal Ising mixture.

Fenz W, Omelyan IP, Folk R.

Phys Rev E Stat Nonlin Soft Matter Phys. 2005 Nov;72(5 Pt 2):056121. Epub 2005 Nov 16.

PMID:
16383702
34.

Critical dynamics of diluted relaxational models coupled to a conserved density.

Dudka M, Folk R, Holovatch Y, Moser G.

Phys Rev E Stat Nonlin Soft Matter Phys. 2005 Sep;72(3 Pt 2):036107. Epub 2005 Sep 9.

PMID:
16241515
35.

XY-spin fluids in an external magnetic field: an integral equation approach.

Omelyan IP, Fenz W, Mryglod IM, Folk R.

Phys Rev E Stat Nonlin Soft Matter Phys. 2005 Sep;72(3 Pt 1):031506. Epub 2005 Sep 16.

PMID:
16241443
36.

Phase behavior of Ising mixtures.

Fenz W, Folk R.

Phys Rev E Stat Nonlin Soft Matter Phys. 2005 Apr;71(4 Pt 2):046104. Epub 2005 Apr 4.

PMID:
15903723
37.

Comparison of two different direct digital radiography systems for the ability to detect artificially prepared periapical lesions.

Folk RB, Thorpe JR, McClanahan SB, Johnson JD, Strother JM.

J Endod. 2005 Apr;31(4):304-6.

PMID:
15793390
38.

XY spin fluid in an external magnetic field.

Omelyan IP, Fenz W, Mryglod IM, Folk R.

Phys Rev Lett. 2005 Feb 4;94(4):045701. Epub 2005 Feb 4.

PMID:
15783572
39.

Critical dynamics of stochastic models with two conserved densities (model C' ).

Folk R, Moser G.

Phys Rev E Stat Nonlin Soft Matter Phys. 2005 Feb;71(2 Pt 2):026118. Epub 2005 Feb 23.

PMID:
15783389
40.

Where two fractals meet: the scaling of a self-avoiding walk on a percolation cluster.

von Ferber C, Blavats'ka V, Folk R, Holovatch Y.

Phys Rev E Stat Nonlin Soft Matter Phys. 2004 Sep;70(3 Pt 2):035104. Epub 2004 Sep 21.

PMID:
15524568
41.

Ising fluids in an external magnetic field: an integral equation approach.

Omelyan IP, Mryglod IM, Folk R, Fenz W.

Phys Rev E Stat Nonlin Soft Matter Phys. 2004 Jun;69(6 Pt 1):061506. Epub 2004 Jun 16. Erratum in: Phys Rev E Stat Nonlin Soft Matter Phys. 2004 Oct;70(4 Pt 2):049903.

PMID:
15244575
42.

Evidence of nanobacterial-like structures in calcified human arteries and cardiac valves.

Miller VM, Rodgers G, Charlesworth JA, Kirkland B, Severson SR, Rasmussen TE, Yagubyan M, Rodgers JC, Cockerill FR 3rd, Folk RL, Rzewuska-Lech E, Kumar V, Farell-Baril G, Lieske JC.

Am J Physiol Heart Circ Physiol. 2004 Sep;287(3):H1115-24. Epub 2004 May 13.

43.

Critical dynamics of stochastic models with energy conservation (model C).

Folk R, Moser G.

Phys Rev E Stat Nonlin Soft Matter Phys. 2004 Mar;69(3 Pt 2):036101. Epub 2004 Mar 4.

PMID:
15089355
44.

Phase diagrams of classical spin fluids: the influence of an external magnetic field on the liquid-gas transition.

Fenz W, Folk R, Mryglod IM, Omelyan IP.

Phys Rev E Stat Nonlin Soft Matter Phys. 2003 Dec;68(6 Pt 1):061510. Epub 2003 Dec 31.

PMID:
14754215
45.

Critical dynamics of model C resolved.

Folk R, Moser G.

Phys Rev Lett. 2003 Jul 18;91(3):030601. Epub 2003 Jul 15.

PMID:
12906408
46.

Binary mixtures of magnetic fluids.

Fenz W, Folk R.

Phys Rev E Stat Nonlin Soft Matter Phys. 2003 Feb;67(2 Pt 1):021507. Epub 2003 Feb 27.

PMID:
12636684
47.

Construction of high-order force-gradient algorithms for integration of motion in classical and quantum systems.

Omelyan IP, Mryglod IM, Folk R.

Phys Rev E Stat Nonlin Soft Matter Phys. 2002 Aug;66(2 Pt 2):026701. Epub 2002 Aug 2.

PMID:
12241312
48.

Dynamic critical behavior near the superfluid transition in 3He-4He mixtures in two loop order.

Folk R, Moser G.

Phys Rev Lett. 2002 Sep 16;89(12):125301. Epub 2002 Aug 27. Erratum in: Phys Rev Lett. 2004 Nov 26;93(22):229902.

PMID:
12225093
49.

Optimized Verlet-like algorithms for molecular dynamics simulations.

Omelyan IP, Mryglod IM, Folk R.

Phys Rev E Stat Nonlin Soft Matter Phys. 2002 May;65(5 Pt 2):056706. Epub 2002 May 17.

PMID:
12059749
50.

Frequency-dependent shear viscosity, sound velocity, and sound attenuation near the critical point in liquids. III. The shear viscosity.

Flossmann G, Folk R, Moser G.

Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics. 1999 Jul;60(1):779-91.

PMID:
11969819

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