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Items: 1 to 50 of 73

1.

Experimental support for multidrug resistance transfer potential in the preterm infant gut microbiota.

Hagbø M, Ravi A, Angell IL, Sunde M, Ludvigsen J, Diep DB, Foley SL, Vento M, Collado MC, Perez-Martinez G, Rudi K.

Pediatr Res. 2019 Jul 1. doi: 10.1038/s41390-019-0491-8. [Epub ahead of print]

PMID:
31261372
2.

Protocols of Conjugative Plasmid Transfer in Salmonella: Plate, Broth, and Filter Mating Approaches.

Khajanchi BK, Kaldhone PR, Foley SL.

Methods Mol Biol. 2019;2016:129-139. doi: 10.1007/978-1-4939-9570-7_12.

PMID:
31197715
3.

Global transcriptomic analyses of Salmonella enterica in Iron-depleted and Iron-rich growth conditions.

Khajanchi BK, Xu J, Grim CJ, Ottesen AR, Ramachandran P, Foley SL.

BMC Genomics. 2019 Jun 13;20(1):490. doi: 10.1186/s12864-019-5768-0.

4.

Draft Genome Sequences of 27 Salmonella enterica Serovar Schwarzengrund Isolates from Clinical Sources.

Khajanchi BK, Yoskowitz NC, Han J, Wang X, Foley SL.

Microbiol Resour Announc. 2019 Mar 21;8(12). pii: e01687-18. doi: 10.1128/MRA.01687-18.

5.

A Review of Prebiotics Against Salmonella in Poultry: Current and Future Potential for Microbiome Research Applications.

Micciche AC, Foley SL, Pavlidis HO, McIntyre DR, Ricke SC.

Front Vet Sci. 2018 Aug 15;5:191. doi: 10.3389/fvets.2018.00191. eCollection 2018. Review.

6.

Draft Genome Sequences of Salmonella enterica Serovar Enteritidis and Kentucky Isolates from Retail Poultry Sources.

Shi Z, Kaldhone PR, Khajanchi BK, Foley SL, Ricke SC.

Genome Announc. 2018 Apr 5;6(14). pii: e00193-18. doi: 10.1128/genomeA.00193-18.

7.

Impact of co-carriage of IncA/C plasmids with additional plasmids on the transfer of antimicrobial resistance in Salmonella enterica isolates.

Han J, Pendleton SJ, Deck J, Singh R, Gilbert J, Johnson TJ, Sanad YM, Nayak R, Foley SL.

Int J Food Microbiol. 2018 Apr 20;271:77-84. doi: 10.1016/j.ijfoodmicro.2018.01.018. Epub 2018 Jan 31.

PMID:
29549790
8.

Structure and Inhibitor Specificity of L,D-Transpeptidase (LdtMt2) from Mycobacterium tuberculosis and Antibiotic Resistance: Calcium Binding Promotes Dimer Formation.

Gokulan K, Khare S, Cerniglia CE, Foley SL, Varughese KI.

AAPS J. 2018 Mar 9;20(2):44. doi: 10.1208/s12248-018-0193-x.

PMID:
29524047
9.

Evaluation of the Genetics and Functionality of Plasmids in Incompatibility Group I1-Positive Salmonella enterica.

Kaldhone PR, Han J, Deck J, Khajanchi B, Nayak R, Foley SL, Ricke SC.

Foodborne Pathog Dis. 2018 Mar;15(3):168-176. doi: 10.1089/fpd.2017.2332. Epub 2017 Dec 21.

PMID:
29265877
10.

Draft Genome Sequences of Ciprofloxacin-Resistant Salmonella enterica Strains with Multiple-Antibiotic Resistance, Isolated from Imported Foods.

Khan AA, Khajanchi BK, Khan SA, Elkins CA, Foley SL.

Genome Announc. 2017 Nov 9;5(45). pii: e01222-17. doi: 10.1128/genomeA.01222-17.

11.

Draft Genome Sequences of Salmonella enterica Isolates Containing Incompatibility Group I1 Plasmids from Swine, Poultry, and Human Sources.

Kaldhone PR, Khajanchi BK, Han J, Nayak R, Ricke SC, Foley SL.

Genome Announc. 2017 Sep 28;5(39). pii: e01056-17. doi: 10.1128/genomeA.01056-17.

12.

Comparative genomic analysis and characterization of incompatibility group FIB plasmid encoded virulence factors of Salmonella enterica isolated from food sources.

Khajanchi BK, Hasan NA, Choi SY, Han J, Zhao S, Colwell RR, Cerniglia CE, Foley SL.

BMC Genomics. 2017 Aug 2;18(1):570. doi: 10.1186/s12864-017-3954-5.

13.

Assessment of gut microbiota populations in lean and obese Zucker rats.

Hakkak R, Korourian S, Foley SL, Erickson BD.

PLoS One. 2017 Jul 13;12(7):e0181451. doi: 10.1371/journal.pone.0181451. eCollection 2017.

14.

Association of the gut microbiota mobilome with hospital location and birth weight in preterm infants.

Ravi A, Estensmo ELF, Abée-Lund TML, Foley SL, Allgaier B, Martin CR, Claud EC, Rudi K.

Pediatr Res. 2017 Nov;82(5):829-838. doi: 10.1038/pr.2017.146. Epub 2017 Aug 2.

PMID:
28665922
15.

Cj0440c Affects Flagella Formation and In Vivo Colonization of Erythromycin-Susceptible and -Resistant Campylobacter jejuni.

Hao H, Fang X, Han J, Foley SL, Wang Y, Cheng G, Wang X, Huang L, Dai M, Liu Z, Yuan Z.

Front Microbiol. 2017 Apr 25;8:729. doi: 10.3389/fmicb.2017.00729. eCollection 2017.

16.

Cj1199 Affect the Development of Erythromycin Resistance in Campylobacter jejuni through Regulation of Leucine Biosynthesis.

Hao H, Li F, Han J, Foley SL, Dai M, Wang X, Wang Y, Huang L, Sun Y, Liu Z, Yuan Z.

Front Microbiol. 2017 Jan 17;8:16. doi: 10.3389/fmicb.2017.00016. eCollection 2017.

17.

Virulence and Genomic Feature of Multidrug Resistant Campylobacter jejuni Isolated from Broiler Chicken.

Hao H, Ren N, Han J, Foley SL, Iqbal Z, Cheng G, Kuang X, Liu J, Liu Z, Dai M, Wang Y, Yuan Z.

Front Microbiol. 2016 Oct 14;7:1605. eCollection 2016.

18.

Draft Genome Sequences of Four Salmonella enterica Strains Isolated from Turkey-Associated Sources.

Khajanchi BK, Han J, Gokulan K, Zhao S, Gies A, Foley SL.

Genome Announc. 2016 Oct 13;4(5). pii: e01122-16. doi: 10.1128/genomeA.01122-16.

19.

Bacterial Populations Associated with Smokeless Tobacco Products.

Han J, Sanad YM, Deck J, Sutherland JB, Li Z, Walters MJ, Duran N, Holman MR, Foley SL.

Appl Environ Microbiol. 2016 Sep 30;82(20):6273-6283. Print 2016 Oct 15.

20.

Transmissible Plasmid Containing Salmonella enterica Heidelberg Isolates Modulate Cytokine Production During Early Stage of Interaction with Intestinal Epithelial Cells.

Gokulan K, Khare S, Williams K, Foley SL.

DNA Cell Biol. 2016 Aug;35(8):443-53. doi: 10.1089/dna.2015.3142. Epub 2016 Apr 15.

PMID:
27082282
21.

Infection of Murine Macrophages by Salmonella enterica Serovar Heidelberg Blocks Murine Norovirus Infectivity and Virus-induced Apoptosis.

Agnihothram SS, Basco MD, Mullis L, Foley SL, Hart ME, Sung K, Azevedo MP.

PLoS One. 2015 Dec 14;10(12):e0144911. doi: 10.1371/journal.pone.0144911. eCollection 2015.

22.

Molecular Characterization of Salmonella enterica Serovars Isolated from a Turkey Production Facility in the Absence of Selective Antimicrobial Pressure.

Sanad YM, Johnson K, Park SH, Han J, Deck J, Foley SL, Kenney B, Ricke S, Nayak R.

Foodborne Pathog Dis. 2016 Feb;13(2):80-7. doi: 10.1089/fpd.2015.2002. Epub 2015 Dec 14.

PMID:
26653998
23.

Diversity of Clostridium perfringens isolates from various sources and prevalence of conjugative plasmids.

Park M, Deck J, Foley SL, Nayak R, Songer JG, Seibel JR, Khan SA, Rooney AP, Hecht DW, Rafii F.

Anaerobe. 2016 Apr;38:25-35. doi: 10.1016/j.anaerobe.2015.11.003. Epub 2015 Nov 30.

PMID:
26608548
24.

The commensal infant gut meta-mobilome as a potential reservoir for persistent multidrug resistance integrons.

Ravi A, Avershina E, Foley SL, Ludvigsen J, Storrø O, Øien T, Johnsen R, McCartney AL, L'Abée-Lund TM, Rudi K.

Sci Rep. 2015 Oct 28;5:15317. doi: 10.1038/srep15317.

25.

Characterization of antibiotic and disinfectant susceptibility profiles among Pseudomonas aeruginosa veterinary isolates recovered during 1994-2003.

Beier RC, Foley SL, Davidson MK, White DG, McDermott PF, Bodeis-Jones S, Zhao S, Andrews K, Crippen TL, Sheffield CL, Poole TL, Anderson RC, Nisbet DJ.

J Appl Microbiol. 2015 Feb;118(2):326-42. doi: 10.1111/jam.12707. Epub 2014 Dec 21.

26.

Data mining tools for Salmonella characterization: application to gel-based fingerprinting analysis.

Zou W, Tang H, Zhao W, Meehan J, Foley SL, Lin WJ, Chen HC, Fang H, Nayak R, Chen JJ.

BMC Bioinformatics. 2013;14 Suppl 14:S15. doi: 10.1186/1471-2105-14-S14-S15. Epub 2013 Oct 9.

27.

Salmonella pathogenicity and host adaptation in chicken-associated serovars.

Foley SL, Johnson TJ, Ricke SC, Nayak R, Danzeisen J.

Microbiol Mol Biol Rev. 2013 Dec;77(4):582-607. doi: 10.1128/MMBR.00015-13. Review.

28.

Evaluation of virulence and antimicrobial resistance in Salmonella enterica serovar Enteritidis isolates from humans and chicken- and egg-associated sources.

Han J, Gokulan K, Barnette D, Khare S, Rooney AW, Deck J, Nayak R, Stefanova R, Hart ME, Foley SL.

Foodborne Pathog Dis. 2013 Dec;10(12):1008-15. doi: 10.1089/fpd.2013.1518. Epub 2013 Oct 8.

PMID:
24102082
29.

Impact of plasmids, including those encodingVirB4/D4 type IV secretion systems, on Salmonella enterica serovar Heidelberg virulence in macrophages and epithelial cells.

Gokulan K, Khare S, Rooney AW, Han J, Lynne AM, Foley SL.

PLoS One. 2013 Oct 3;8(10):e77866. doi: 10.1371/journal.pone.0077866. eCollection 2013.

30.

Unique class 1 integron and multiple resistance genes co-located on IncHI2 plasmid is associated with the emerging multidrug resistance of Salmonella Indiana isolated from chicken in China.

Lai J, Wang Y, Shen J, Li R, Han J, Foley SL, Wu C.

Foodborne Pathog Dis. 2013 Jul;10(7):581-8. doi: 10.1089/fpd.2012.1455. Epub 2013 May 14.

PMID:
23672474
31.

Meta-analysis of pulsed-field gel electrophoresis fingerprints based on a constructed Salmonella database.

Zou W, Chen HC, Hise KB, Tang H, Foley SL, Meehan J, Lin WJ, Nayak R, Xu J, Fang H, Chen JJ.

PLoS One. 2013;8(3):e59224. doi: 10.1371/journal.pone.0059224. Epub 2013 Mar 14.

32.

Chromosomal and plasmid-mediated fluoroquinolone resistance mechanisms among broad-spectrum-cephalosporin-resistant Escherichia coli isolates recovered from companion animals in the USA.

Shaheen BW, Nayak R, Foley SL, Boothe DM.

J Antimicrob Chemother. 2013 May;68(5):1019-24. doi: 10.1093/jac/dks514. Epub 2013 Jan 9.

33.

DNA sequence analysis of plasmids from multidrug resistant Salmonella enterica serotype Heidelberg isolates.

Han J, Lynne AM, David DE, Tang H, Xu J, Nayak R, Kaldhone P, Logue CM, Foley SL.

PLoS One. 2012;7(12):e51160. doi: 10.1371/journal.pone.0051160. Epub 2012 Dec 10.

34.

Massively parallel sequencing of enriched target amplicons for high-resolution genotyping of Salmonella serovars.

Singh P, Foley SL, Nayak R, Kwon YM.

Mol Cell Probes. 2013 Apr;27(2):80-5. doi: 10.1016/j.mcp.2012.11.004. Epub 2012 Nov 29.

PMID:
23201627
35.

Recombinant Iss as a potential vaccine for avian colibacillosis.

Lynne AM, Kariyawasam S, Wannemuehler Y, Johnson TJ, Johnson SJ, Sinha AS, Lynne DK, Moon HW, Jordan DM, Logue CM, Foley SL, Nolan LK.

Avian Dis. 2012 Mar;56(1):192-9.

PMID:
22545546
36.

Prevalence of ESBLs and PMQR genes in fecal Escherichia coli isolated from the non-human primates in six zoos in China.

Wang Y, He T, Han J, Wang J, Foley SL, Yang G, Wan S, Shen J, Wu C.

Vet Microbiol. 2012 Sep 14;159(1-2):53-9. doi: 10.1016/j.vetmic.2012.03.009. Epub 2012 Mar 13.

PMID:
22487457
37.

Characterization of antimicrobial resistance of Pseudomonas aeruginosa isolated from canine infections.

Lin D, Foley SL, Qi Y, Han J, Ji C, Li R, Wu C, Shen J, Wang Y.

J Appl Microbiol. 2012 Jul;113(1):16-23. doi: 10.1111/j.1365-2672.2012.05304.x. Epub 2012 May 3.

38.

Multilocus sequence typing of Salmonella strains by high-throughput sequencing of selectively amplified target genes.

Singh P, Foley SL, Nayak R, Kwon YM.

J Microbiol Methods. 2012 Jan;88(1):127-33. doi: 10.1016/j.mimet.2011.11.004. Epub 2011 Nov 11.

PMID:
22108494
39.

Molecular characterization of resistance to extended-spectrum cephalosporins in clinical Escherichia coli isolates from companion animals in the United States.

Shaheen BW, Nayak R, Foley SL, Kweon O, Deck J, Park M, Rafii F, Boothe DM.

Antimicrob Agents Chemother. 2011 Dec;55(12):5666-75. doi: 10.1128/AAC.00656-11. Epub 2011 Sep 26.

40.

Population dynamics of Salmonella enterica serotypes in commercial egg and poultry production.

Foley SL, Nayak R, Hanning IB, Johnson TJ, Han J, Ricke SC.

Appl Environ Microbiol. 2011 Jul;77(13):4273-9. doi: 10.1128/AEM.00598-11. Epub 2011 May 13. Review.

41.

The new genetic environment of cfr on plasmid pBS-02 in a Bacillus strain.

Zhang WJ, Wu CM, Wang Y, Shen ZQ, Dai L, Han J, Foley SL, Shen JZ, Zhang Q.

J Antimicrob Chemother. 2011 May;66(5):1174-5. doi: 10.1093/jac/dkr037. Epub 2011 Feb 17. No abstract available.

PMID:
21393171
42.

Microarray analysis of virulence gene profiles in Salmonella serovars from food/food animal environment.

Zou W, Al-Khaldi SF, Branham WS, Han T, Fuscoe JC, Han J, Foley SL, Xu J, Fang H, Cerniglia CE, Nayak R.

J Infect Dev Ctries. 2011 Mar 2;5(2):94-105.

43.

Horizontal gene transfer of a ColV plasmid has resulted in a dominant avian clonal type of Salmonella enterica serovar Kentucky.

Johnson TJ, Thorsness JL, Anderson CP, Lynne AM, Foley SL, Han J, Fricke WF, McDermott PF, White DG, Khatri M, Stell AL, Flores C, Singer RS.

PLoS One. 2010 Dec 22;5(12):e15524. doi: 10.1371/journal.pone.0015524.

44.

Comparison of Salmonella enterica serovar Heidelberg isolates from human patients with those from animal and food sources.

Han J, David DE, Deck J, Lynne AM, Kaldhone P, Nayak R, Stefanova R, Foley SL.

J Clin Microbiol. 2011 Mar;49(3):1130-3. doi: 10.1128/JCM.01931-10. Epub 2010 Dec 22.

45.

Evaluation of virulence factor profiling in the characterization of veterinary Escherichia coli isolates.

David DE, Lynne AM, Han J, Foley SL.

Appl Environ Microbiol. 2010 Nov;76(22):7509-13. doi: 10.1128/AEM.00726-10. Epub 2010 Oct 1.

46.

Evidence of multiple virulence subtypes in nosocomial and community-associated MRSA genotypes in companion animals from the upper midwestern and northeastern United States.

Lin Y, Barker E, Kislow J, Kaldhone P, Stemper ME, Pantrangi M, Moore FM, Hall M, Fritsche TR, Novicki T, Foley SL, Shukla SK.

Clin Med Res. 2011 Mar;9(1):7-16. doi: 10.3121/cmr.2010.944. Epub 2010 Aug 25.

47.

Salmonella enterica isolates from pasture-raised poultry exhibit antimicrobial resistance and class I integrons.

Melendez SN, Hanning I, Han J, Nayak R, Clement AR, Wooming A, Hererra P, Jones FT, Foley SL, Ricke SC.

J Appl Microbiol. 2010 Dec;109(6):1957-66. doi: 10.1111/j.1365-2672.2010.04825.x.

48.

Evaluation of pulsed-field gel electrophoresis profiles for identification of Salmonella serotypes.

Zou W, Lin WJ, Foley SL, Chen CH, Nayak R, Chen JJ.

J Clin Microbiol. 2010 Sep;48(9):3122-6. doi: 10.1128/JCM.00645-10. Epub 2010 Jul 14.

49.

Genetic diversity in Blastomyces dermatitidis: implications for PCR detection in clinical and environmental samples.

Meece JK, Anderson JL, Klein BS, Sullivan TD, Foley SL, Baumgardner DJ, Brummitt CF, Reed KD.

Med Mycol. 2010 Mar;48(2):285-90. doi: 10.1080/13693780903103952.

50.

Molecular typing methodologies for microbial source tracking and epidemiological investigations of Gram-negative bacterial foodborne pathogens.

Foley SL, Lynne AM, Nayak R.

Infect Genet Evol. 2009 Jul;9(4):430-40. doi: 10.1016/j.meegid.2009.03.004. Epub 2009 Mar 24. Review.

PMID:
19460308

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